RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 P01823 113 aa9.21□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Rbx1P62878 108 aa9.21□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Sdk2Q6V4S5 2176 aa9.2□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Gm9925F6T2U3 160 aa9.2□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Dennd4cA6H8H2 1906 aa9.2□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Ncor1Q60974 2453 aa9.2□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Gm4707V9GXN5 68 aa9.2□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Gm1968Q3T9I3 115 aa9.19□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Lypd6Q8BPP5 171 aa9.19□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Polr2kQ63871 58 aa9.19□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Fam19a5Q91WE9 132 aa9.19□□□□□ -0.94
Ssh1-202ENSMUST00000112298 PtprsB0V2N1 1907 aa9.19□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Edn2P22389 175 aa9.19□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Ighv10-3A0A075B5T6 119 aa9.18□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Prr12E9PYL2 2035 aaKnown RBP9.18□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Fhl2O70433 279 aa9.18□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Ube2d1P61080 147 aaKnown RBP9.17□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Igkv8-30A0A140T8M3 121 aa9.17□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Ep400Q8CHI8 3072 aaKnown RBP9.17□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Pla2g2cP48076 150 aa9.16□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Sec16aA2AIX1 2377 aa9.16□□□□□ -0.94
Ssh1-202ENSMUST00000112298 NpwA0A1L1STR8 176 aa9.15□□□□□ -0.94
Ssh1-202ENSMUST00000112298 PscaP57096 123 aa9.15□□□□□ -0.94
Ssh1-202ENSMUST00000112298 P84750 121 aa9.15□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Notch4P31695 1964 aa9.15□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Dkk4Q8VEJ3 221 aa9.15□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Plxnb3Q9QY40 1902 aa9.15□□□□□ -0.94
Ssh1-202ENSMUST00000112298 A0A286YE49 62 aa9.15□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Tet1Q3URK3 2007 aaKnown RBP9.15□□□□□ -0.94
Ssh1-202ENSMUST00000112298 Gm8439G3UWA7 96 aa9.15□□□□□ -0.95
Ssh1-202ENSMUST00000112298 BtcQ05928 177 aa9.14□□□□□ -0.95
Ssh1-202ENSMUST00000112298 4930564D02RikQ9D4S4 103 aa9.14□□□□□ -0.95
Ssh1-202ENSMUST00000112298 1700056E22RikF7CNM6 234 aa9.14□□□□□ -0.95
Ssh1-202ENSMUST00000112298 P01755 137 aa9.14□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Gm11011D3Z3L9 86 aa9.14□□□□□ -0.95
Ssh1-202ENSMUST00000112298 1700074P13RikQ9D9G7 251 aa9.14□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Ighv2-9-1A0A075B697 116 aa9.13□□□□□ -0.95
Ssh1-202ENSMUST00000112298 SycnQ8VCK7 134 aa9.13□□□□□ -0.95
Ssh1-202ENSMUST00000112298 F5O88783 2183 aa9.13□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Gm19935A0A1B0GSF9 52 aa9.13□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Gm10337F7DEP7 55 aa9.13□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Ighv1-72P01751 139 aa9.13□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Cd27P41272 250 aa9.12□□□□□ -0.95
Ssh1-202ENSMUST00000112298 A830031A19RikQ8BNT5 113 aa9.12□□□□□ -0.95
Ssh1-202ENSMUST00000112298 B430305J03RikQ8BQQ8 176 aa9.12□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Gm10490F6VBM2 120 aa9.12□□□□□ -0.95
Ssh1-202ENSMUST00000112298 PrlhG3UWC3 86 aa9.12□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Gm10509O88255 85 aa9.12□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Fer1l4A3KGK3 1992 aa9.12□□□□□ -0.95
Ssh1-202ENSMUST00000112298 4930535I16RikQ9CUI2 172 aa9.12□□□□□ -0.95
Ssh1-202ENSMUST00000112298 1700011M02RikB1AX35 88 aa9.12□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Ube2d3P61079 147 aa9.12□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Ube2d2P62838 147 aa9.12□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Igkv3-12A0A140T8P0 119 aa9.11□□□□□ -0.95
Ssh1-202ENSMUST00000112298 LhbO09108 141 aa9.11□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Nupr2Q497P3 102 aa9.11□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Gm16223Q8CBM3 117 aa9.11□□□□□ -0.95
Ssh1-202ENSMUST00000112298 HelzQ6DFV5 1964 aaKnown RBP9.11□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Cdc42se2Q8BGH7 84 aa9.1□□□□□ -0.95
Ssh1-202ENSMUST00000112298 4930556J24RikQ9D4U7 146 aa9.1□□□□□ -0.95
Ssh1-202ENSMUST00000112298 P06329 120 aa9.1□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Ighv8-11A0A075B5X4 119 aa9.1□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Trav14-1A0A0G2JF94 121 aa9.1□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Rpl28P41105 137 aaKnown RBP9.1□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Defb42Q8BVB5 75 aa9.1□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Gm42715A0A087WP63 3095 aaKnown RBP9.1□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Serp1Q9Z1W5 66 aa9.1□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Wdr90Q6ZPG2 1874 aa9.09□□□□□ -0.95
Ssh1-202ENSMUST00000112298 H2al1mQ9DAD9 105 aa9.09□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Sprr2jO70561 109 aa9.09□□□□□ -0.95
Ssh1-202ENSMUST00000112298 SbsponQ3UPR9 264 aa9.09□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Defb40Q70KL2 73 aa9.09□□□□□ -0.95
Ssh1-202ENSMUST00000112298 Gm9922Q8C3P1 144 aa9.09□□□□□ -0.95
Ssh1-202ENSMUST00000112298 9230102O04RikA2ASX7 82 aa9.08□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Gm6899Q3USS0 134 aa9.08□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Ovol3D3YYM0 189 aa9.06□□□□□ -0.96
Ssh1-202ENSMUST00000112298 ScxQ64124 207 aa9.06□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Wisp2Q9Z0G4 251 aa9.06□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Krtap27-1E9PX37 202 aa9.06□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Notch3Q61982 2318 aa9.06□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Znf575Q3TXZ1 239 aa9.06□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Wfdc12Q9JHY3 85 aa9.06□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Lce6aD3YV94 81 aa9.05□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Apoc4Q61268 124 aa9.05□□□□□ -0.96
Ssh1-202ENSMUST00000112298 CrygfQ9CXV3 174 aa9.05□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Dscaml1Q4VA61 2053 aa9.04□□□□□ -0.96
Ssh1-202ENSMUST00000112298 A0A286YCN5 57 aa9.04□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Gm21748Q3UE70 102 aa9.04□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Gpha2Q925Q5 128 aa9.03□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Usp34Q6ZQ93 3582 aa9.03□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Prrc2aQ7TSC1 2158 aaKnown RBP9.03□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Ifitm6A0A1B0GS75 124 aa9.03□□□□□ -0.96
Ssh1-202ENSMUST00000112298 4930524J08RikQ9CUJ5 163 aa9.03□□□□□ -0.96
Ssh1-202ENSMUST00000112298 Trbv13-2A0A140T8N6 113 aa9.02□□□□□ -0.97
Ssh1-202ENSMUST00000112298 SrarpQ3ULG3 163 aa9.02□□□□□ -0.97
Ssh1-202ENSMUST00000112298 Ep300B2RWS6 2412 aa9.02□□□□□ -0.97
Ssh1-202ENSMUST00000112298 Gvin1Q80SU7 2427 aa9.02□□□□□ -0.97
Ssh1-202ENSMUST00000112298 H2al1kJ3QP08 105 aa9.01□□□□□ -0.97
Ssh1-202ENSMUST00000112298 Pla2g1bQ9Z0Y2 146 aa9.01□□□□□ -0.97
Ssh1-202ENSMUST00000112298 Cspg4Q8VHY0 2327 aa9.01□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 69.4 ms