RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 4930518I15RikQ3V2W7 57 aa11.08□□□□□ -0.64
Shank1-202ENSMUST00000107935 Col4a5Q63ZW6 1691 aa11.07□□□□□ -0.64
Shank1-202ENSMUST00000107935 Arfgef3Q3UGY8 2170 aa11.07□□□□□ -0.64
Shank1-202ENSMUST00000107935 Gtf3c1Q8K284 2101 aa11.07□□□□□ -0.64
Shank1-202ENSMUST00000107935 Gm5142Q8C5X9 133 aa11.07□□□□□ -0.64
Shank1-202ENSMUST00000107935 Shank1D3YZU1 2167 aa11.07□□□□□ -0.64
Shank1-202ENSMUST00000107935 Pla2g2dQ9WVF6 144 aa11.06□□□□□ -0.64
Shank1-202ENSMUST00000107935 PtprsB0V2N1 1907 aa11.06□□□□□ -0.64
Shank1-202ENSMUST00000107935 Igkv3-7A0A0G2JE31 119 aa11.06□□□□□ -0.64
Shank1-202ENSMUST00000107935 Ntn5Q3UQ22 452 aa11.06□□□□□ -0.64
Shank1-202ENSMUST00000107935 Crip3Q6Q6R3 243 aa11.06□□□□□ -0.64
Shank1-202ENSMUST00000107935 Nsun4C4P6S0 806 aaKnown RBP11.05□□□□□ -0.64
Shank1-202ENSMUST00000107935 A0A286YCN5 57 aa11.05□□□□□ -0.64
Shank1-202ENSMUST00000107935 Smr3aQ61900 147 aa11.05□□□□□ -0.64
Shank1-202ENSMUST00000107935 Rps28P62858 69 aaKnown RBP11.05□□□□□ -0.64
Shank1-202ENSMUST00000107935 Crip2Q9DCT8 208 aaKnown RBP11.05□□□□□ -0.64
Shank1-202ENSMUST00000107935 Q8K1L6 76 aa11.04□□□□□ -0.64
Shank1-202ENSMUST00000107935 PkdrejQ9Z0T6 2126 aa11.03□□□□□ -0.64
Shank1-202ENSMUST00000107935 Cdc42se2Q8BGH7 84 aa11.03□□□□□ -0.64
Shank1-202ENSMUST00000107935 Gm10197F6QEY5 67 aa11.02□□□□□ -0.64
Shank1-202ENSMUST00000107935 4930556J24RikQ9D4U7 146 aa11.02□□□□□ -0.64
Shank1-202ENSMUST00000107935 Prr12E9PYL2 2035 aaKnown RBP11.02□□□□□ -0.64
Shank1-202ENSMUST00000107935 Gm10490F6VBM2 120 aa11.02□□□□□ -0.65
Shank1-202ENSMUST00000107935 AgrnA2ASQ1 1950 aa11.02□□□□□ -0.65
Shank1-202ENSMUST00000107935 NrgnP60761 78 aa11.01□□□□□ -0.65
Shank1-202ENSMUST00000107935 Znf706Q9D115 76 aaKnown RBP11.01□□□□□ -0.65
Shank1-202ENSMUST00000107935 Wfdc13Q5DQQ6 81 aa11.01□□□□□ -0.65
Shank1-202ENSMUST00000107935 Gm10845Q3UNY9 185 aa11.01□□□□□ -0.65
Shank1-202ENSMUST00000107935 Defb18Q30KP5 85 aa11□□□□□ -0.65
Shank1-202ENSMUST00000107935 Ovol3D3YYM0 189 aa11□□□□□ -0.65
Shank1-202ENSMUST00000107935 Gpha2Q925Q5 128 aa11□□□□□ -0.65
Shank1-202ENSMUST00000107935 Ighv1-59A0A0A6YXE0 117 aa10.99□□□□□ -0.65
Shank1-202ENSMUST00000107935 Nup210Q9QY81 1886 aaKnown RBP10.99□□□□□ -0.65
Shank1-202ENSMUST00000107935 Wfdc15aQ8BH89 80 aa10.99□□□□□ -0.65
Shank1-202ENSMUST00000107935 Chchd7Q8K2Q5 85 aa10.99□□□□□ -0.65
Shank1-202ENSMUST00000107935 Gm10509O88255 85 aa10.98□□□□□ -0.65
Shank1-202ENSMUST00000107935 Ahctf1Q8CJF7 2243 aaKnown RBP10.98□□□□□ -0.65
Shank1-202ENSMUST00000107935 Bean1Q9EQG5 255 aa10.98□□□□□ -0.65
Shank1-202ENSMUST00000107935 SbsponQ3UPR9 264 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 TncQ80YX1 2110 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 Wfdc6bF6ULY1 148 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 B430305J03RikQ8BQQ8 176 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 Pkd1l3Q2EG98 2201 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 Sptbn2Q68FG2 2388 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 A530084C06RikQ3UTW2 186 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 Dscaml1Q4VA61 2053 aa10.96□□□□□ -0.65
Shank1-202ENSMUST00000107935 Akap6E9Q9K8 2307 aa10.96□□□□□ -0.65
Shank1-202ENSMUST00000107935 Gm9887F6RFI0 207 aa10.96□□□□□ -0.65
Shank1-202ENSMUST00000107935 LhbO09108 141 aa10.96□□□□□ -0.66
Shank1-202ENSMUST00000107935 Ly6c2P0CW03 131 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 CrygeQ03740 174 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 CrygfQ9CXV3 174 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 Gm10226O88253 85 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 4930519P11RikQ9CUJ8 166 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 Crybg1A0A0G2JG52 2065 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 Ncoa6Q9JL19 2067 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 Gm10549Q3URY4 149 aa10.94□□□□□ -0.66
Shank1-202ENSMUST00000107935 C130032M10RikQ8C888 123 aa10.94□□□□□ -0.66
Shank1-202ENSMUST00000107935 SycnQ8VCK7 134 aa10.94□□□□□ -0.66
Shank1-202ENSMUST00000107935 U90926O08546 118 aa10.93□□□□□ -0.66
Shank1-202ENSMUST00000107935 Coa6Q8BGD8 79 aa10.93□□□□□ -0.66
Shank1-202ENSMUST00000107935 Prr13Q9CQJ5 137 aa10.92□□□□□ -0.66
Shank1-202ENSMUST00000107935 Tet1Q3URK3 2007 aaKnown RBP10.92□□□□□ -0.66
Shank1-202ENSMUST00000107935 PoleQ9WVF7 2283 aa10.92□□□□□ -0.66
Shank1-202ENSMUST00000107935 Col4a6B1AVK5 1691 aa10.91□□□□□ -0.66
Shank1-202ENSMUST00000107935 Fhl2O70433 279 aa10.9□□□□□ -0.66
Shank1-202ENSMUST00000107935 Wfdc3Q14AE4 130 aa10.9□□□□□ -0.66
Shank1-202ENSMUST00000107935 TroQ6DIC6 2087 aa10.9□□□□□ -0.66
Shank1-202ENSMUST00000107935 Ighv2-9-1A0A075B697 116 aa10.9□□□□□ -0.66
Shank1-202ENSMUST00000107935 PrlhG3UWC3 86 aa10.9□□□□□ -0.66
Shank1-202ENSMUST00000107935 Lmo4P61969 165 aa10.9□□□□□ -0.66
Shank1-202ENSMUST00000107935 PscaP57096 123 aa10.9□□□□□ -0.67
Shank1-202ENSMUST00000107935 Med12A2AGH6 2190 aa10.9□□□□□ -0.67
Shank1-202ENSMUST00000107935 P01819 144 aa10.89□□□□□ -0.67
Shank1-202ENSMUST00000107935 E130116L18RikQ8BMV6 101 aa10.89□□□□□ -0.67
Shank1-202ENSMUST00000107935 Pcdh15Q99PJ1 1943 aa10.89□□□□□ -0.67
Shank1-202ENSMUST00000107935 Zfp407G3UVV3 2246 aa10.89□□□□□ -0.67
Shank1-202ENSMUST00000107935 TprF6ZDS4 2431 aaKnown RBP10.89□□□□□ -0.67
Shank1-202ENSMUST00000107935 Tet2Q4JK59 1912 aaKnown RBP10.89□□□□□ -0.67
Shank1-202ENSMUST00000107935 Sostdc1Q9CQN4 206 aa10.88□□□□□ -0.67
Shank1-202ENSMUST00000107935 Wisp2Q9Z0G4 251 aa10.88□□□□□ -0.67
Shank1-202ENSMUST00000107935 Krtap27-1E9PX37 202 aa10.87□□□□□ -0.67
Shank1-202ENSMUST00000107935 Ptprz1B9EKR1 2312 aa10.87□□□□□ -0.67
Shank1-202ENSMUST00000107935 Ighv1-56A0A0A6YXG2 117 aa10.87□□□□□ -0.67
Shank1-202ENSMUST00000107935 Tln2Q71LX4 2375 aa10.86□□□□□ -0.67
Shank1-202ENSMUST00000107935 Defb45Q3V490 66 aa10.85□□□□□ -0.67
Shank1-202ENSMUST00000107935 Defb42Q8BVB5 75 aa10.85□□□□□ -0.67
Shank1-202ENSMUST00000107935 Gm17509Q9CZ61 145 aa10.85□□□□□ -0.67
Shank1-202ENSMUST00000107935 Cacna1hO88427 2365 aa10.85□□□□□ -0.67
Shank1-202ENSMUST00000107935 Igkv8-28A0A0G2JE47 121 aa10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 Myo7bQ99MZ6 2113 aa10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 HelzQ6DFV5 1964 aaKnown RBP10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 P06329 120 aa10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 Frem1Q684R7 2191 aa10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 E130114P18RikF6S0S7 154 aa10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 B230217C12RikE9Q3Z1 139 aa10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 Krtap16-1A2A5X5 502 aa10.83□□□□□ -0.68
Shank1-202ENSMUST00000107935 Notch4P31695 1964 aa10.83□□□□□ -0.68
Shank1-202ENSMUST00000107935 Fer1l4A3KGK3 1992 aa10.83□□□□□ -0.68
Shank1-202ENSMUST00000107935 BC025920Q3US60 128 aa10.82□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms