RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 4930518I15RikQ3V2W7 57 aa11.08□□□□□ -0.64
Shank1-202ENSMUST00000107935 Col4a5Q63ZW6 1691 aa11.07□□□□□ -0.64
Shank1-202ENSMUST00000107935 Arfgef3Q3UGY8 2170 aa11.07□□□□□ -0.64
Shank1-202ENSMUST00000107935 Gtf3c1Q8K284 2101 aa11.07□□□□□ -0.64
Shank1-202ENSMUST00000107935 Gm5142Q8C5X9 133 aa11.07□□□□□ -0.64
Shank1-202ENSMUST00000107935 Shank1D3YZU1 2167 aa11.07□□□□□ -0.64
Shank1-202ENSMUST00000107935 Pla2g2dQ9WVF6 144 aa11.06□□□□□ -0.64
Shank1-202ENSMUST00000107935 PtprsB0V2N1 1907 aa11.06□□□□□ -0.64
Shank1-202ENSMUST00000107935 Igkv3-7A0A0G2JE31 119 aa11.06□□□□□ -0.64
Shank1-202ENSMUST00000107935 Ntn5Q3UQ22 452 aa11.06□□□□□ -0.64
Shank1-202ENSMUST00000107935 Crip3Q6Q6R3 243 aa11.06□□□□□ -0.64
Shank1-202ENSMUST00000107935 Nsun4C4P6S0 806 aaKnown RBP11.05□□□□□ -0.64
Shank1-202ENSMUST00000107935 A0A286YCN5 57 aa11.05□□□□□ -0.64
Shank1-202ENSMUST00000107935 Smr3aQ61900 147 aa11.05□□□□□ -0.64
Shank1-202ENSMUST00000107935 Rps28P62858 69 aaKnown RBP11.05□□□□□ -0.64
Shank1-202ENSMUST00000107935 Crip2Q9DCT8 208 aaKnown RBP11.05□□□□□ -0.64
Shank1-202ENSMUST00000107935 Q8K1L6 76 aa11.04□□□□□ -0.64
Shank1-202ENSMUST00000107935 PkdrejQ9Z0T6 2126 aa11.03□□□□□ -0.64
Shank1-202ENSMUST00000107935 Cdc42se2Q8BGH7 84 aa11.03□□□□□ -0.64
Shank1-202ENSMUST00000107935 Gm10197F6QEY5 67 aa11.02□□□□□ -0.64
Shank1-202ENSMUST00000107935 4930556J24RikQ9D4U7 146 aa11.02□□□□□ -0.64
Shank1-202ENSMUST00000107935 Prr12E9PYL2 2035 aaKnown RBP11.02□□□□□ -0.64
Shank1-202ENSMUST00000107935 Gm10490F6VBM2 120 aa11.02□□□□□ -0.65
Shank1-202ENSMUST00000107935 AgrnA2ASQ1 1950 aa11.02□□□□□ -0.65
Shank1-202ENSMUST00000107935 NrgnP60761 78 aa11.01□□□□□ -0.65
Shank1-202ENSMUST00000107935 Znf706Q9D115 76 aaKnown RBP11.01□□□□□ -0.65
Shank1-202ENSMUST00000107935 Wfdc13Q5DQQ6 81 aa11.01□□□□□ -0.65
Shank1-202ENSMUST00000107935 Gm10845Q3UNY9 185 aa11.01□□□□□ -0.65
Shank1-202ENSMUST00000107935 Defb18Q30KP5 85 aa11□□□□□ -0.65
Shank1-202ENSMUST00000107935 Ovol3D3YYM0 189 aa11□□□□□ -0.65
Shank1-202ENSMUST00000107935 Gpha2Q925Q5 128 aa11□□□□□ -0.65
Shank1-202ENSMUST00000107935 Ighv1-59A0A0A6YXE0 117 aa10.99□□□□□ -0.65
Shank1-202ENSMUST00000107935 Nup210Q9QY81 1886 aaKnown RBP10.99□□□□□ -0.65
Shank1-202ENSMUST00000107935 Wfdc15aQ8BH89 80 aa10.99□□□□□ -0.65
Shank1-202ENSMUST00000107935 Chchd7Q8K2Q5 85 aa10.99□□□□□ -0.65
Shank1-202ENSMUST00000107935 Gm10509O88255 85 aa10.98□□□□□ -0.65
Shank1-202ENSMUST00000107935 Ahctf1Q8CJF7 2243 aaKnown RBP10.98□□□□□ -0.65
Shank1-202ENSMUST00000107935 Bean1Q9EQG5 255 aa10.98□□□□□ -0.65
Shank1-202ENSMUST00000107935 SbsponQ3UPR9 264 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 TncQ80YX1 2110 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 Wfdc6bF6ULY1 148 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 B430305J03RikQ8BQQ8 176 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 Pkd1l3Q2EG98 2201 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 Sptbn2Q68FG2 2388 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 A530084C06RikQ3UTW2 186 aa10.97□□□□□ -0.65
Shank1-202ENSMUST00000107935 Dscaml1Q4VA61 2053 aa10.96□□□□□ -0.65
Shank1-202ENSMUST00000107935 Akap6E9Q9K8 2307 aa10.96□□□□□ -0.65
Shank1-202ENSMUST00000107935 Gm9887F6RFI0 207 aa10.96□□□□□ -0.65
Shank1-202ENSMUST00000107935 LhbO09108 141 aa10.96□□□□□ -0.66
Shank1-202ENSMUST00000107935 Ly6c2P0CW03 131 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 CrygeQ03740 174 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 CrygfQ9CXV3 174 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 Gm10226O88253 85 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 4930519P11RikQ9CUJ8 166 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 Crybg1A0A0G2JG52 2065 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 Ncoa6Q9JL19 2067 aa10.95□□□□□ -0.66
Shank1-202ENSMUST00000107935 Gm10549Q3URY4 149 aa10.94□□□□□ -0.66
Shank1-202ENSMUST00000107935 C130032M10RikQ8C888 123 aa10.94□□□□□ -0.66
Shank1-202ENSMUST00000107935 SycnQ8VCK7 134 aa10.94□□□□□ -0.66
Shank1-202ENSMUST00000107935 U90926O08546 118 aa10.93□□□□□ -0.66
Shank1-202ENSMUST00000107935 Coa6Q8BGD8 79 aa10.93□□□□□ -0.66
Shank1-202ENSMUST00000107935 Prr13Q9CQJ5 137 aa10.92□□□□□ -0.66
Shank1-202ENSMUST00000107935 Tet1Q3URK3 2007 aaKnown RBP10.92□□□□□ -0.66
Shank1-202ENSMUST00000107935 PoleQ9WVF7 2283 aa10.92□□□□□ -0.66
Shank1-202ENSMUST00000107935 Col4a6B1AVK5 1691 aa10.91□□□□□ -0.66
Shank1-202ENSMUST00000107935 Fhl2O70433 279 aa10.9□□□□□ -0.66
Shank1-202ENSMUST00000107935 Wfdc3Q14AE4 130 aa10.9□□□□□ -0.66
Shank1-202ENSMUST00000107935 TroQ6DIC6 2087 aa10.9□□□□□ -0.66
Shank1-202ENSMUST00000107935 Ighv2-9-1A0A075B697 116 aa10.9□□□□□ -0.66
Shank1-202ENSMUST00000107935 PrlhG3UWC3 86 aa10.9□□□□□ -0.66
Shank1-202ENSMUST00000107935 Lmo4P61969 165 aa10.9□□□□□ -0.66
Shank1-202ENSMUST00000107935 PscaP57096 123 aa10.9□□□□□ -0.67
Shank1-202ENSMUST00000107935 Med12A2AGH6 2190 aa10.9□□□□□ -0.67
Shank1-202ENSMUST00000107935 P01819 144 aa10.89□□□□□ -0.67
Shank1-202ENSMUST00000107935 E130116L18RikQ8BMV6 101 aa10.89□□□□□ -0.67
Shank1-202ENSMUST00000107935 Pcdh15Q99PJ1 1943 aa10.89□□□□□ -0.67
Shank1-202ENSMUST00000107935 Zfp407G3UVV3 2246 aa10.89□□□□□ -0.67
Shank1-202ENSMUST00000107935 TprF6ZDS4 2431 aaKnown RBP10.89□□□□□ -0.67
Shank1-202ENSMUST00000107935 Tet2Q4JK59 1912 aaKnown RBP10.89□□□□□ -0.67
Shank1-202ENSMUST00000107935 Sostdc1Q9CQN4 206 aa10.88□□□□□ -0.67
Shank1-202ENSMUST00000107935 Wisp2Q9Z0G4 251 aa10.88□□□□□ -0.67
Shank1-202ENSMUST00000107935 Krtap27-1E9PX37 202 aa10.87□□□□□ -0.67
Shank1-202ENSMUST00000107935 Ptprz1B9EKR1 2312 aa10.87□□□□□ -0.67
Shank1-202ENSMUST00000107935 Ighv1-56A0A0A6YXG2 117 aa10.87□□□□□ -0.67
Shank1-202ENSMUST00000107935 Tln2Q71LX4 2375 aa10.86□□□□□ -0.67
Shank1-202ENSMUST00000107935 Defb45Q3V490 66 aa10.85□□□□□ -0.67
Shank1-202ENSMUST00000107935 Defb42Q8BVB5 75 aa10.85□□□□□ -0.67
Shank1-202ENSMUST00000107935 Gm17509Q9CZ61 145 aa10.85□□□□□ -0.67
Shank1-202ENSMUST00000107935 Cacna1hO88427 2365 aa10.85□□□□□ -0.67
Shank1-202ENSMUST00000107935 Igkv8-28A0A0G2JE47 121 aa10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 Myo7bQ99MZ6 2113 aa10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 HelzQ6DFV5 1964 aaKnown RBP10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 P06329 120 aa10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 Frem1Q684R7 2191 aa10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 E130114P18RikF6S0S7 154 aa10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 B230217C12RikE9Q3Z1 139 aa10.84□□□□□ -0.67
Shank1-202ENSMUST00000107935 Krtap16-1A2A5X5 502 aa10.83□□□□□ -0.68
Shank1-202ENSMUST00000107935 Notch4P31695 1964 aa10.83□□□□□ -0.68
Shank1-202ENSMUST00000107935 Fer1l4A3KGK3 1992 aa10.83□□□□□ -0.68
Shank1-202ENSMUST00000107935 BC025920Q3US60 128 aa10.82□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms