RNA–Protein interactions for RNA: ENSMUST00000081170.8

Sgcb-201, Transcript of Beta-sarcoglycan, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sgcb, Length 3,786 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sgcb-201ENSMUST00000081170 Tmem223Q9CQE2 199 aaKnown RBP8.54□□□□□ -1.04
Sgcb-201ENSMUST00000081170 Trav4-3A0A0B4J1K1 110 aa8.54□□□□□ -1.04
Sgcb-201ENSMUST00000081170 Gm10553J3QPF1 123 aa8.54□□□□□ -1.04
Sgcb-201ENSMUST00000081170 Lamtor3O88653 124 aa8.54□□□□□ -1.04
Sgcb-201ENSMUST00000081170 Myo9aQ8C170 2542 aa8.54□□□□□ -1.04
Sgcb-201ENSMUST00000081170 Trav13-2A0A075B649 110 aa8.53□□□□□ -1.04
Sgcb-201ENSMUST00000081170 P01753 117 aa8.53□□□□□ -1.04
Sgcb-201ENSMUST00000081170 Defb30Q30KN4 75 aa8.53□□□□□ -1.04
Sgcb-201ENSMUST00000081170 Smr3aQ61900 147 aa8.53□□□□□ -1.04
Sgcb-201ENSMUST00000081170 1500011B03RikQ3TTH7 73 aa8.53□□□□□ -1.04
Sgcb-201ENSMUST00000081170 P01750 117 aa8.53□□□□□ -1.04
Sgcb-201ENSMUST00000081170 Rps28P62858 69 aaKnown RBP8.53□□□□□ -1.04
Sgcb-201ENSMUST00000081170 Fam229bQ8CF36 80 aa8.53□□□□□ -1.04
Sgcb-201ENSMUST00000081170 Ighv3-4A0A0A6YXF1 117 aa8.52□□□□□ -1.04
Sgcb-201ENSMUST00000081170 Tomm7Q9D173 55 aa8.52□□□□□ -1.04
Sgcb-201ENSMUST00000081170 Sfta2E9PXB6 77 aa8.52□□□□□ -1.05
Sgcb-201ENSMUST00000081170 P01748 117 aa8.52□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Ube2e2Q91W82 201 aa8.52□□□□□ -1.05
Sgcb-201ENSMUST00000081170 4930524J08RikQ9CUJ5 163 aa8.52□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Bean1Q9EQG5 255 aa8.52□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Trav9n-2A0A0G2JDP3 113 aa8.51□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Ighv1-74A0A0G2JGK2 117 aa8.51□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Spink4O35679 86 aa8.51□□□□□ -1.05
Sgcb-201ENSMUST00000081170 PspnO70300 156 aa8.51□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Minos1Q7TNS2 76 aa8.51□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Fam19a3Q7TPG6 132 aa8.51□□□□□ -1.05
Sgcb-201ENSMUST00000081170 4930556J24RikQ9D4U7 146 aa8.51□□□□□ -1.05
Sgcb-201ENSMUST00000081170 1700056E22RikF7CNM6 234 aa8.51□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Snrpd3P62320 126 aaKnown RBP8.51□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Col5a1O88207 1838 aa8.5□□□□□ -1.05
Sgcb-201ENSMUST00000081170 CnfnQ6PCW6 111 aa8.5□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Zfhx3Q61329 3726 aa8.5□□□□□ -1.05
Sgcb-201ENSMUST00000081170 1700011M02RikB1AX35 88 aa8.5□□□□□ -1.05
Sgcb-201ENSMUST00000081170 LhbO09108 141 aa8.49□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Ighv1-61P01749 117 aa8.49□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Cops9Q3U898 57 aa8.49□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Gphb5Q812B2 130 aa8.49□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Rpl39lQ9CQD0 51 aa8.49□□□□□ -1.05
Sgcb-201ENSMUST00000081170 1700084M14RikB1AT01 78 aa8.49□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Ccl3P10855 92 aa8.49□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Tm2d2Q8R0I4 213 aa8.49□□□□□ -1.05
Sgcb-201ENSMUST00000081170 P18532 116 aa8.49□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Ly6gP35461 111 aa8.49□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Gata4Q08369 441 aa8.49□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Sostdc1Q9CQN4 206 aa8.49□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Ighv1-82A0A0G2JEU7 117 aa8.48□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Trav13d-4A0A0G2JFX3 110 aa8.48□□□□□ -1.05
Sgcb-201ENSMUST00000081170 H2al1aQ5M8Q2 105 aa8.48□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Vpreb2P13373 142 aa8.48□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Psmb11Q8BG41 302 aa8.48□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Higd2aQ9CQJ1 106 aa8.48□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Crlf1Q9JM58 425 aa8.48□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Gcn1E9PVA8 2671 aaKnown RBP8.48□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Trank1Q8BV79 2999 aa8.48□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Ighv1-50A0A075B5W1 117 aa8.47□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Ighv1-49A0A0A6YWX2 117 aa8.46□□□□□ -1.05
Sgcb-201ENSMUST00000081170 1700010B08RikQ9DAI7 102 aa8.46□□□□□ -1.05
Sgcb-201ENSMUST00000081170 Cox6b1P56391 86 aaKnown RBP8.46□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Dynlrb2Q9DAJ5 96 aa8.46□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Trav9-2A0A075B647 113 aa8.46□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Trav9-4A0A0B4J1K2 113 aa8.46□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Shisa2Q8QZV2 295 aa8.46□□□□□ -1.06
Sgcb-201ENSMUST00000081170 2010109I03RikQ9CQ11 111 aa8.46□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Gm20499D3Z4G5 72 aa8.45□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Gm9887F6RFI0 207 aa8.45□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Serp1Q9Z1W5 66 aa8.45□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Ighv1-64A0A075B5X3 117 aa8.45□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Ube2d4D3YUH6 135 aa8.45□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Zfand3Q497H0 227 aa8.45□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Q9CX25 107 aa8.45□□□□□ -1.06
Sgcb-201ENSMUST00000081170 HrnrQ8VHD8 2496 aa8.45□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Gm5878E9PUB3 99 aa8.45□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Gm9747Q810H1 104 aa8.45□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Ighv1-58A0A075B5W9 117 aa8.44□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Trav9d-3A0A075B695 113 aa8.44□□□□□ -1.06
Sgcb-201ENSMUST00000081170 P01755 137 aa8.44□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Chd8Q09XV5 2582 aaKnown RBP8.44□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Ighv1-4A0A075B5T4 117 aa8.44□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Ighv1-53A0A075B5W3 117 aa8.44□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Ighv1-66A0A075B5X5 117 aa8.43□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Igkv1-117A0A140T8M0 119 aa8.43□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Ormdl1Q921I0 153 aa8.43□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Lage3Q9CR70 148 aa8.43□□□□□ -1.06
Sgcb-201ENSMUST00000081170 4930442H23RikQ9D5G7 103 aa8.43□□□□□ -1.06
Sgcb-201ENSMUST00000081170 P01820 115 aa8.43□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Dkk4Q8VEJ3 221 aa8.43□□□□□ -1.06
Sgcb-201ENSMUST00000081170 PtprqP0C5E4 2300 aa8.43□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Fgf23Q9EPC2 251 aa8.43□□□□□ -1.06
Sgcb-201ENSMUST00000081170 MtorQ9JLN9 2549 aa8.42□□□□□ -1.06
Sgcb-201ENSMUST00000081170 NrgnP60761 78 aa8.42□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Klk9Q32M27 251 aa8.42□□□□□ -1.06
Sgcb-201ENSMUST00000081170 BC025920Q3US60 128 aa8.42□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Ighv12-3A0A075B5T1 117 aa8.41□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Igkv4-61A0A0G2JH00 117 aa8.41□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Ovol3D3YYM0 189 aa8.41□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Gm20604F8WIA3 75 aa8.41□□□□□ -1.06
Sgcb-201ENSMUST00000081170 BlcapP62951 87 aa8.41□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Prr15lQ8JZM2 100 aa8.41□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Ighv1-62-1A0A075B5U3 116 aa8.4□□□□□ -1.06
Sgcb-201ENSMUST00000081170 Ighv1-12A0A0A6YXJ9 117 aa8.4□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 85.7 ms