RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Ube2aQ9Z255 152 aa10.78□□□□□ -0.68
Pcdha1-201ENSMUST00000070797 H2al1kJ3QP08 105 aa10.78□□□□□ -0.68
Pcdha1-201ENSMUST00000070797 Ufsp1Q9CZP0 217 aa10.78□□□□□ -0.68
Pcdha1-201ENSMUST00000070797 Tns1E9Q0S6 1888 aaKnown RBP10.77□□□□□ -0.68
Pcdha1-201ENSMUST00000070797 Pcnx3Q8VI59 2028 aa10.77□□□□□ -0.68
Pcdha1-201ENSMUST00000070797 9430015G10RikA2ASP7 199 aa10.77□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Defb45Q3V490 66 aa10.77□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Crip2Q9DCT8 208 aaKnown RBP10.77□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Dscaml1Q4VA61 2053 aa10.77□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Tcl1b5P56845 121 aa10.76□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Fgf23Q9EPC2 251 aa10.76□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Gm10549Q3URY4 149 aa10.76□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 SbsponQ3UPR9 264 aa10.76□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Pcnx1Q9QYC1 2344 aa10.75□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Ncor2Q9WU42 2472 aaKnown RBP10.75□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 P01745 121 aa10.75□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Cox7bP56393 80 aa10.75□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 1700056E22RikF7CNM6 234 aa10.75□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 BC025920Q3US60 128 aa10.75□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 CdsnQ7TPC1 561 aa10.75□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 BaalcQ8VHV1 145 aa10.75□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Plac8l1Q08EJ0 177 aa10.74□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Ntn5Q3UQ22 452 aa10.74□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 LhbO09108 141 aa10.74□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Gm10509O88255 85 aa10.74□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 P01755 137 aa10.74□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Igkv3-5A0A140T8M6 119 aa10.74□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Gm10647E9Q8X0 124 aa10.74□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Krtap27-1E9PX37 202 aa10.73□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Gm10735Q3US96 136 aa10.73□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Chchd7Q8K2Q5 85 aa10.73□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Ovol3D3YYM0 189 aa10.72□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Gm10226O88253 85 aa10.72□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Rtl10D3YWW5 146 aa10.71□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 E130116L18RikQ8BMV6 101 aa10.71□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Cdc42se2Q8BGH7 84 aa10.71□□□□□ -0.69
Pcdha1-201ENSMUST00000070797 Gm10490F6VBM2 120 aa10.71□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Gm10845Q3UNY9 185 aa10.71□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Prr13Q9CQJ5 137 aa10.71□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Rnase1P00683 149 aa10.71□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Dkk4Q8VEJ3 221 aa10.71□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Trbv13-2A0A140T8N6 113 aa10.7□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Gm11011D3Z3L9 86 aa10.7□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Sdk2Q6V4S5 2176 aa10.7□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Plxnb1Q8CJH3 2119 aa10.7□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Igkv4-92A0A0B4J1I2 117 aa10.7□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Gm26566Q8CAC1 153 aa10.7□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Q9DAB9 146 aa10.7□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 SnurfQ9WU12 71 aa10.7□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 CadB2RQC6 2225 aa10.7□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Lmo4P61969 165 aa10.7□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 4930564D02RikQ9D4S4 103 aa10.7□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 2010109I03RikQ9CQ11 111 aa10.7□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Sec61gP60060 68 aa10.69□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 4930518I15RikQ3V2W7 57 aa10.69□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Gvin1Q80SU7 2427 aa10.69□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Ighv10-3A0A075B5T6 119 aa10.69□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Pcnx2Q5DU28 2122 aa10.69□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Pip4p1Q3TWL2 284 aa10.69□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Gm9913Q8BQQ2 135 aa10.69□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 A0A286YE49 62 aa10.68□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 NrgnP60761 78 aa10.68□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Gm5142Q8C5X9 133 aa10.68□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 H2al1mQ9DAD9 105 aa10.68□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Sprr2jO70561 109 aa10.67□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Ep300B2RWS6 2412 aa10.67□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Reg3bP35230 175 aa10.66□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 4930556J24RikQ9D4U7 146 aa10.66□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Ighv1-59A0A0A6YXE0 117 aa10.65□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 TroQ6DIC6 2087 aa10.65□□□□□ -0.7
Pcdha1-201ENSMUST00000070797 Cd164Q9R0L9 197 aa10.64□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Ighv1-56A0A0A6YXG2 117 aa10.63□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Spint4Q9D263 159 aa10.63□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Gm5153P01627 120 aa10.63□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Fam19a1Q7TPG8 133 aa10.62□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Igkv1-117A0A140T8M0 119 aa10.62□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Fhl2O70433 279 aa10.62□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Dopey2Q3UHQ6 2295 aa10.62□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Higd2aQ9CQJ1 106 aa10.61□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Tet1Q3URK3 2007 aaKnown RBP10.61□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Gm10570F6VB42 170 aa10.61□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Prpf8Q99PV0 2335 aaKnown RBP10.61□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Wdr90Q6ZPG2 1874 aa10.61□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Ighv2-9-1A0A075B697 116 aa10.61□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Krtap16-1A2A5X5 502 aa10.61□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 TectaO08523 2155 aa10.6□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Sdk1Q3UH53 2193 aa10.6□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Psmb11Q8BG41 302 aa10.6□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Esm1Q9QYY7 184 aa10.59□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Col6a4A2AX52 2309 aa10.59□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 SonQ9QX47 2444 aaKnown RBP10.59□□□□□ -0.71
Pcdha1-201ENSMUST00000070797 Shisa2Q8QZV2 295 aa10.58□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 Ighv2-5A0A0A6YY69 116 aa10.58□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 Arhgef17Q80U35 2057 aa10.57□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 Igkv1-110A0A0B4J1I0 119 aa10.57□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 Ifitm6A0A1B0GS75 124 aa10.57□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 B230217C12RikE9Q3Z1 139 aa10.57□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 3110070M22RikQ9DAQ7 118 aa10.57□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 DysfQ9ESD7 2090 aa10.56□□□□□ -0.72
Pcdha1-201ENSMUST00000070797 ScxQ64124 207 aa10.56□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 59.8 ms