RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 A0A1Y7VMQ4 148 aa13.58□□□□□ -0.23
Lig3-209ENSMUST00000173009 Igkv1-99F6XWB2 120 aa13.58□□□□□ -0.23
Lig3-209ENSMUST00000173009 Tmem238lA0A1B0GS74 79 aa13.58□□□□□ -0.24
Lig3-209ENSMUST00000173009 Reg3bP35230 175 aa13.58□□□□□ -0.24
Lig3-209ENSMUST00000173009 Timm10bQ9WV96 100 aa13.58□□□□□ -0.24
Lig3-209ENSMUST00000173009 Ighv2-6A0A075B6A7 116 aa13.57□□□□□ -0.24
Lig3-209ENSMUST00000173009 2310050C09RikG5E8Z3 280 aa13.57□□□□□ -0.24
Lig3-209ENSMUST00000173009 Plpp2Q9DAX2 276 aa13.57□□□□□ -0.24
Lig3-209ENSMUST00000173009 PlecQ9QXS1 4691 aaKnown RBP13.57□□□□□ -0.24
Lig3-209ENSMUST00000173009 Ighv8-8A0A0A6YXQ0 119 aa13.56□□□□□ -0.24
Lig3-209ENSMUST00000173009 Rpl36-ps4A0A140T8U4 117 aa13.56□□□□□ -0.24
Lig3-209ENSMUST00000173009 Bsph1Q3UW26 133 aa13.56□□□□□ -0.24
Lig3-209ENSMUST00000173009 Fam241bQ9D882 120 aa13.56□□□□□ -0.24
Lig3-209ENSMUST00000173009 Q5BN45 167 aa13.55□□□□□ -0.24
Lig3-209ENSMUST00000173009 Eif4ebp1Q60876 117 aa13.55□□□□□ -0.24
Lig3-209ENSMUST00000173009 Esp4A8R0T8 117 aa13.55□□□□□ -0.24
Lig3-209ENSMUST00000173009 Insl3O09107 122 aa13.55□□□□□ -0.24
Lig3-209ENSMUST00000173009 Plac8l1Q08EJ0 177 aa13.55□□□□□ -0.24
Lig3-209ENSMUST00000173009 Tm2d2Q8R0I4 213 aa13.55□□□□□ -0.24
Lig3-209ENSMUST00000173009 PolP10400 120 aa13.54□□□□□ -0.24
Lig3-209ENSMUST00000173009 E130208F15RikQ3UPV3 143 aa13.54□□□□□ -0.24
Lig3-209ENSMUST00000173009 OtorQ9JIE3 128 aa13.54□□□□□ -0.24
Lig3-209ENSMUST00000173009 Rbx1P62878 108 aa13.53□□□□□ -0.24
Lig3-209ENSMUST00000173009 Q3UNZ8 350 aa13.53□□□□□ -0.24
Lig3-209ENSMUST00000173009 Ifitm1Q9D103 106 aa13.53□□□□□ -0.24
Lig3-209ENSMUST00000173009 Gm45785A0A1B0GT05 94 aa13.53□□□□□ -0.24
Lig3-209ENSMUST00000173009 FcorP0DJI6 106 aa13.53□□□□□ -0.24
Lig3-209ENSMUST00000173009 Pla2g2eQ9QUL3 142 aa13.53□□□□□ -0.24
Lig3-209ENSMUST00000173009 Ighv1-11A0A0A6YWI9 117 aa13.52□□□□□ -0.25
Lig3-209ENSMUST00000173009 P03985 172 aa13.51□□□□□ -0.25
Lig3-209ENSMUST00000173009 Gm4861Q8C5A4 106 aa13.51□□□□□ -0.25
Lig3-209ENSMUST00000173009 Igkv3-9A0A140T8P4 119 aa13.5□□□□□ -0.25
Lig3-209ENSMUST00000173009 SnrpeP62305 92 aaKnown RBP13.5□□□□□ -0.25
Lig3-209ENSMUST00000173009 Odf3l2Q3TZ65 277 aa13.5□□□□□ -0.25
Lig3-209ENSMUST00000173009 AY074887Q8R5F9 132 aa13.5□□□□□ -0.25
Lig3-209ENSMUST00000173009 HilpdaQ9JLS0 64 aa13.5□□□□□ -0.25
Lig3-209ENSMUST00000173009 Cox7a2lQ61387 111 aa13.5□□□□□ -0.25
Lig3-209ENSMUST00000173009 Zfand2bQ91X58 257 aa13.5□□□□□ -0.25
Lig3-209ENSMUST00000173009 Gm1968Q3T9I3 115 aa13.49□□□□□ -0.25
Lig3-209ENSMUST00000173009 BC025920Q3US60 128 aa13.49□□□□□ -0.25
Lig3-209ENSMUST00000173009 RetnlaQ9EP95 111 aa13.49□□□□□ -0.25
Lig3-209ENSMUST00000173009 PemtQ61907 199 aa13.48□□□□□ -0.25
Lig3-209ENSMUST00000173009 Fam19a4Q7TPG5 135 aa13.48□□□□□ -0.25
Lig3-209ENSMUST00000173009 Psors1c2Q80ZC9 134 aa13.48□□□□□ -0.25
Lig3-209ENSMUST00000173009 Gm21693J3QK27 380 aa13.48□□□□□ -0.25
Lig3-209ENSMUST00000173009 Igll1P20764 209 aa13.48□□□□□ -0.25
Lig3-209ENSMUST00000173009 Gng4P50153 75 aa13.48□□□□□ -0.25
Lig3-209ENSMUST00000173009 Gm10842Q3U587 122 aa13.48□□□□□ -0.25
Lig3-209ENSMUST00000173009 Malsu1Q9CWV0 228 aa13.48□□□□□ -0.25
Lig3-209ENSMUST00000173009 Atxn7l1Q9CZ05 146 aa13.48□□□□□ -0.25
Lig3-209ENSMUST00000173009 Tspan13Q9D8C2 204 aa13.48□□□□□ -0.25
Lig3-209ENSMUST00000173009 Igkv3-1A0A075B5P1 119 aa13.47□□□□□ -0.25
Lig3-209ENSMUST00000173009 Gm9747Q810H1 104 aa13.47□□□□□ -0.25
Lig3-209ENSMUST00000173009 Cdc42se2Q8BGH7 84 aa13.47□□□□□ -0.25
Lig3-209ENSMUST00000173009 Tm4sf20Q9CQY8 226 aa13.47□□□□□ -0.25
Lig3-209ENSMUST00000173009 Gm9047B9EJX3 177 aa13.46□□□□□ -0.25
Lig3-209ENSMUST00000173009 NpyP57774 97 aa13.46□□□□□ -0.25
Lig3-209ENSMUST00000173009 Dnah7aE9Q0T8 4024 aa13.45□□□□□ -0.26
Lig3-209ENSMUST00000173009 Hist3h2bbQ8CGP0 126 aa13.45□□□□□ -0.26
Lig3-209ENSMUST00000173009 Hist3h2baQ9D2U9 126 aa13.45□□□□□ -0.26
Lig3-209ENSMUST00000173009 TgO08710 2766 aa13.45□□□□□ -0.26
Lig3-209ENSMUST00000173009 Zfp951A0A087WRH0 451 aa13.44□□□□□ -0.26
Lig3-209ENSMUST00000173009 Prh1P05142 261 aa13.44□□□□□ -0.26
Lig3-209ENSMUST00000173009 Prp2P05143 317 aa13.44□□□□□ -0.26
Lig3-209ENSMUST00000173009 Igkv4-79A0A075B5L8 119 aa13.43□□□□□ -0.26
Lig3-209ENSMUST00000173009 Cfap126Q6P8X9 189 aa13.43□□□□□ -0.26
Lig3-209ENSMUST00000173009 Higd1aQ9JLR9 95 aa13.43□□□□□ -0.26
Lig3-209ENSMUST00000173009 EnhoQ8K1D8 76 aa13.41□□□□□ -0.26
Lig3-209ENSMUST00000173009 MobpQ9D2P8 170 aa13.41□□□□□ -0.26
Lig3-209ENSMUST00000173009 Ighv1-72P01751 139 aa13.4□□□□□ -0.26
Lig3-209ENSMUST00000173009 TcraP01849 138 aa13.4□□□□□ -0.26
Lig3-209ENSMUST00000173009 Gm10130F6ZHM5 101 aa13.4□□□□□ -0.26
Lig3-209ENSMUST00000173009 Hist1h2bfP10853 126 aa13.39□□□□□ -0.27
Lig3-209ENSMUST00000173009 PlnP61014 52 aa13.39□□□□□ -0.27
Lig3-209ENSMUST00000173009 Hist1h2bbQ64475 126 aa13.39□□□□□ -0.27
Lig3-209ENSMUST00000173009 Hist1h2bkQ8CGP1 126 aaKnown RBP13.39□□□□□ -0.27
Lig3-209ENSMUST00000173009 Hist1h2bpQ8CGP2 126 aaKnown RBP13.39□□□□□ -0.27
Lig3-209ENSMUST00000173009 Timm17aQ9Z0V8 171 aa13.39□□□□□ -0.27
Lig3-209ENSMUST00000173009 Vamp3P63024 103 aa13.37□□□□□ -0.27
Lig3-209ENSMUST00000173009 Gm16485Q8C4B7 115 aa13.37□□□□□ -0.27
Lig3-209ENSMUST00000173009 Ighv13-2A0A0A6YWN3 119 aa13.37□□□□□ -0.27
Lig3-209ENSMUST00000173009 Trav7-6A0A075B640 112 aa13.36□□□□□ -0.27
Lig3-209ENSMUST00000173009 Ighv2-6-8A0A0A6YWY9 116 aa13.36□□□□□ -0.27
Lig3-209ENSMUST00000173009 Tmem170bP86050 132 aa13.36□□□□□ -0.27
Lig3-209ENSMUST00000173009 Cd33Q63994 403 aa13.36□□□□□ -0.27
Lig3-209ENSMUST00000173009 Ifitm10Q8BR26 201 aa13.36□□□□□ -0.27
Lig3-209ENSMUST00000173009 Psmb2Q9R1P3 201 aa13.36□□□□□ -0.27
Lig3-209ENSMUST00000173009 Esp34G3UXG0 151 aa13.35□□□□□ -0.27
Lig3-209ENSMUST00000173009 RetnQ99P87 114 aa13.35□□□□□ -0.27
Lig3-209ENSMUST00000173009 Defa15P50713 93 aa13.35□□□□□ -0.27
Lig3-209ENSMUST00000173009 Gm11444F6QMA6 170 aa13.34□□□□□ -0.27
Lig3-209ENSMUST00000173009 Gm10542F6XDR3 90 aa13.34□□□□□ -0.27
Lig3-209ENSMUST00000173009 Prss29Q99MS4 279 aa13.34□□□□□ -0.27
Lig3-209ENSMUST00000173009 Igkv6-13A0A0G2JGY3 119 aa13.33□□□□□ -0.28
Lig3-209ENSMUST00000173009 Krtap11-1E9Q2E9 183 aa13.33□□□□□ -0.28
Lig3-209ENSMUST00000173009 Bak1O08734 209 aa13.33□□□□□ -0.28
Lig3-209ENSMUST00000173009 Tfpi2O35536 230 aa13.33□□□□□ -0.28
Lig3-209ENSMUST00000173009 P01794 123 aa13.33□□□□□ -0.28
Lig3-209ENSMUST00000173009 Trav12-3A0A075B648 115 aa13.32□□□□□ -0.28
Lig3-209ENSMUST00000173009 Igkv2-137A0A0B4J1H6 120 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 68.7 ms