RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Gm20730A0A075B5J6 119 aa9.37□□□□□ -0.91
Nup88-203ENSMUST00000108531 Igkv4-91A0A075B5L2 119 aa9.37□□□□□ -0.91
Nup88-203ENSMUST00000108531 Trav4d-3A0A075B625 110 aa9.37□□□□□ -0.91
Nup88-203ENSMUST00000108531 P01786 117 aa9.37□□□□□ -0.91
Nup88-203ENSMUST00000108531 Timm17bQ9Z0V7 172 aa9.37□□□□□ -0.91
Nup88-203ENSMUST00000108531 1700020N15RikL7MTX3 112 aa9.36□□□□□ -0.91
Nup88-203ENSMUST00000108531 Smrp1Q2MH31 260 aa9.36□□□□□ -0.91
Nup88-203ENSMUST00000108531 Ucn2Q99ML8 113 aa9.36□□□□□ -0.91
Nup88-203ENSMUST00000108531 2310009B15RikA0A0A6YWI4 143 aa9.36□□□□□ -0.91
Nup88-203ENSMUST00000108531 Igkv4-78A0A0A6YYE5 119 aa9.36□□□□□ -0.91
Nup88-203ENSMUST00000108531 Gm815Q3UWS2 115 aa9.36□□□□□ -0.91
Nup88-203ENSMUST00000108531 Fam110dQ80X91 271 aa9.36□□□□□ -0.91
Nup88-203ENSMUST00000108531 Prelid3aQ8VE85 172 aa9.36□□□□□ -0.91
Nup88-203ENSMUST00000108531 Ang3P97802 145 aa9.35□□□□□ -0.91
Nup88-203ENSMUST00000108531 Trav9n-2A0A0G2JDP3 113 aa9.34□□□□□ -0.91
Nup88-203ENSMUST00000108531 Eif4ebp1Q60876 117 aa9.34□□□□□ -0.91
Nup88-203ENSMUST00000108531 Gm9747Q810H1 104 aa9.34□□□□□ -0.91
Nup88-203ENSMUST00000108531 Trav13d-1A0A075B606 110 aa9.34□□□□□ -0.91
Nup88-203ENSMUST00000108531 Gm29423A0A087WRM1 55 aa9.34□□□□□ -0.91
Nup88-203ENSMUST00000108531 Glrp1E9Q9S8 174 aa9.34□□□□□ -0.91
Nup88-203ENSMUST00000108531 P01738 130 aa9.34□□□□□ -0.91
Nup88-203ENSMUST00000108531 4930415O20RikQ8CDT5 131 aa9.34□□□□□ -0.91
Nup88-203ENSMUST00000108531 H1fxQ80ZM5 188 aa9.33□□□□□ -0.92
Nup88-203ENSMUST00000108531 Fgf23Q9EPC2 251 aa9.33□□□□□ -0.92
Nup88-203ENSMUST00000108531 Ep300B2RWS6 2412 aa9.33□□□□□ -0.92
Nup88-203ENSMUST00000108531 Gm17472A0A075B683 117 aa9.33□□□□□ -0.92
Nup88-203ENSMUST00000108531 CenpwQ3URR0 86 aa9.33□□□□□ -0.92
Nup88-203ENSMUST00000108531 Gm3443F7CCV5 94 aa9.32□□□□□ -0.92
Nup88-203ENSMUST00000108531 Gm8439G3UWA7 96 aa9.32□□□□□ -0.92
Nup88-203ENSMUST00000108531 Rnf152Q8BG47 203 aa9.32□□□□□ -0.92
Nup88-203ENSMUST00000108531 Rnf183Q8QZS5 190 aa9.32□□□□□ -0.92
Nup88-203ENSMUST00000108531 Ube2wQ8VDW4 151 aa9.32□□□□□ -0.92
Nup88-203ENSMUST00000108531 Q99M08 65 aa9.32□□□□□ -0.92
Nup88-203ENSMUST00000108531 OtogO55225 2910 aa9.31□□□□□ -0.92
Nup88-203ENSMUST00000108531 Gcn1E9PVA8 2671 aaKnown RBP9.31□□□□□ -0.92
Nup88-203ENSMUST00000108531 Atp5g3P56384 141 aa9.31□□□□□ -0.92
Nup88-203ENSMUST00000108531 Gm9913Q8BQQ2 135 aa9.31□□□□□ -0.92
Nup88-203ENSMUST00000108531 Tmem101Q91VP7 257 aa9.31□□□□□ -0.92
Nup88-203ENSMUST00000108531 Akap6E9Q9K8 2307 aa9.31□□□□□ -0.92
Nup88-203ENSMUST00000108531 Smim10l1A0A087WNQ7 89 aa9.3□□□□□ -0.92
Nup88-203ENSMUST00000108531 Tmem213Q08EA8 116 aa9.3□□□□□ -0.92
Nup88-203ENSMUST00000108531 4930432M17RikQ3V0W9 174 aa9.29□□□□□ -0.92
Nup88-203ENSMUST00000108531 Cox6cQ9CPQ1 76 aa9.29□□□□□ -0.92
Nup88-203ENSMUST00000108531 Utp20Q5XG71 2788 aaKnown RBP9.29□□□□□ -0.92
Nup88-203ENSMUST00000108531 NbasE9Q411 2356 aa9.28□□□□□ -0.92
Nup88-203ENSMUST00000108531 Ighv1-61P01749 117 aa9.28□□□□□ -0.92
Nup88-203ENSMUST00000108531 1700010B08RikQ9DAI7 102 aa9.28□□□□□ -0.92
Nup88-203ENSMUST00000108531 Muc4Q8JZM8 3443 aa9.28□□□□□ -0.92
Nup88-203ENSMUST00000108531 Kmt2bO08550 2713 aa9.28□□□□□ -0.92
Nup88-203ENSMUST00000108531 Trav7-6A0A075B640 112 aa9.28□□□□□ -0.92
Nup88-203ENSMUST00000108531 Gm11020F6ZGD5 61 aa9.28□□□□□ -0.92
Nup88-203ENSMUST00000108531 ColqO35348 457 aa9.28□□□□□ -0.92
Nup88-203ENSMUST00000108531 P01823 113 aa9.28□□□□□ -0.92
Nup88-203ENSMUST00000108531 CirbpP60824 172 aaKnown RBP9.28□□□□□ -0.92
Nup88-203ENSMUST00000108531 Lyrm7Q9DA03 104 aa9.28□□□□□ -0.92
Nup88-203ENSMUST00000108531 Avpi1Q9D7H4 142 aa9.27□□□□□ -0.93
Nup88-203ENSMUST00000108531 Chd8Q09XV5 2582 aaKnown RBP9.27□□□□□ -0.93
Nup88-203ENSMUST00000108531 LystP97412 3788 aa9.27□□□□□ -0.93
Nup88-203ENSMUST00000108531 Gm10542F6XDR3 90 aa9.26□□□□□ -0.93
Nup88-203ENSMUST00000108531 Rnase1P00683 149 aa9.26□□□□□ -0.93
Nup88-203ENSMUST00000108531 Gm10767Q3TQP0 103 aa9.26□□□□□ -0.93
Nup88-203ENSMUST00000108531 Eif4ebp3Q80VV3 101 aa9.26□□□□□ -0.93
Nup88-203ENSMUST00000108531 Wdr38Q9D994 303 aa9.25□□□□□ -0.93
Nup88-203ENSMUST00000108531 Dmbt1Q60997 2085 aa9.25□□□□□ -0.93
Nup88-203ENSMUST00000108531 Nbeal1E9PYP2 2688 aa9.25□□□□□ -0.93
Nup88-203ENSMUST00000108531 Igkv4-79A0A075B5L8 119 aa9.25□□□□□ -0.93
Nup88-203ENSMUST00000108531 Gm9513B3GLJ6 99 aa9.25□□□□□ -0.93
Nup88-203ENSMUST00000108531 Gm7849D3YX03 116 aa9.25□□□□□ -0.93
Nup88-203ENSMUST00000108531 Rpl36aP83882 106 aaKnown RBP9.25□□□□□ -0.93
Nup88-203ENSMUST00000108531 Fxyd5P97808 178 aa9.25□□□□□ -0.93
Nup88-203ENSMUST00000108531 Morn3Q8C5T4 241 aa9.25□□□□□ -0.93
Nup88-203ENSMUST00000108531 Ccl21aP84444 133 aa9.24□□□□□ -0.93
Nup88-203ENSMUST00000108531 Ccl21bP86792 133 aa9.24□□□□□ -0.93
Nup88-203ENSMUST00000108531 Ccl21cP86793 133 aa9.24□□□□□ -0.93
Nup88-203ENSMUST00000108531 Gm4861Q8C5A4 106 aa9.24□□□□□ -0.93
Nup88-203ENSMUST00000108531 Ptpn13Q64512 2453 aa9.24□□□□□ -0.93
Nup88-203ENSMUST00000108531 FlncQ8VHX6 2726 aaKnown RBP9.23□□□□□ -0.93
Nup88-203ENSMUST00000108531 Celsr2Q9R0M0 2920 aa9.23□□□□□ -0.93
Nup88-203ENSMUST00000108531 Ighv1-62-1A0A075B5U3 116 aa9.23□□□□□ -0.93
Nup88-203ENSMUST00000108531 Shisa2Q8QZV2 295 aa9.23□□□□□ -0.93
Nup88-203ENSMUST00000108531 Phpt1Q9DAK9 124 aa9.23□□□□□ -0.93
Nup88-203ENSMUST00000108531 Nav3Q80TN7 2359 aa9.23□□□□□ -0.93
Nup88-203ENSMUST00000108531 Trav13n-1A0A0G2JEU8 110 aa9.23□□□□□ -0.93
Nup88-203ENSMUST00000108531 P01729 129 aa9.23□□□□□ -0.93
Nup88-203ENSMUST00000108531 Cops9Q3U898 57 aa9.23□□□□□ -0.93
Nup88-203ENSMUST00000108531 SpinklQ8CEK3 90 aa9.23□□□□□ -0.93
Nup88-203ENSMUST00000108531 Prr13Q9CQJ5 137 aa9.23□□□□□ -0.93
Nup88-203ENSMUST00000108531 Ly6hQ9WUC3 139 aa9.23□□□□□ -0.93
Nup88-203ENSMUST00000108531 Gm5089A1L3C8 106 aa9.22□□□□□ -0.93
Nup88-203ENSMUST00000108531 Gm7075D3Z497 112 aa9.22□□□□□ -0.93
Nup88-203ENSMUST00000108531 Defb42Q8BVB5 75 aa9.22□□□□□ -0.93
Nup88-203ENSMUST00000108531 Sostdc1Q9CQN4 206 aa9.22□□□□□ -0.93
Nup88-203ENSMUST00000108531 Xlr5cQ9JJR2 179 aa9.22□□□□□ -0.93
Nup88-203ENSMUST00000108531 Spink1P09036 80 aa9.21□□□□□ -0.93
Nup88-203ENSMUST00000108531 Atp5eP56382 52 aa9.21□□□□□ -0.93
Nup88-203ENSMUST00000108531 Spink10Q8CAC8 162 aa9.21□□□□□ -0.93
Nup88-203ENSMUST00000108531 Abca12E9Q876 2595 aa9.21□□□□□ -0.94
Nup88-203ENSMUST00000108531 PrlhG3UWC3 86 aa9.21□□□□□ -0.94
Nup88-203ENSMUST00000108531 Tfpi2O35536 230 aa9.21□□□□□ -0.94
Nup88-203ENSMUST00000108531 Plac8l1Q08EJ0 177 aa9.21□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 169.4 ms