RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Igf2rQ07113 2483 aaKnown RBP12.4□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Rps28P62858 69 aaKnown RBP12.4□□□□□ -0.42
Col17a1-202ENSMUST00000086923 Dennd4cA6H8H2 1906 aa12.4□□□□□ -0.42
Col17a1-202ENSMUST00000086923 P01747 120 aa12.4□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Gm12689Q8BQU9 117 aa12.39□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Igkv4-92A0A0B4J1I2 117 aa12.39□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Gm10553J3QPF1 123 aa12.39□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Gm21748Q3UE70 102 aa12.39□□□□□ -0.43
Col17a1-202ENSMUST00000086923 AgrnA2ASQ1 1950 aa12.39□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Trav9n-4A0A075B631 113 aa12.39□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Plxnb1Q8CJH3 2119 aa12.39□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Q99M08 65 aa12.38□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Obsl1D3YYU8 1804 aaKnown RBP12.38□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Arhgap21Q6DFV3 1944 aa12.38□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Gm5878E9PUB3 99 aa12.38□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Ighv1-53A0A075B5W3 117 aa12.38□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Cox6b1P56391 86 aaKnown RBP12.38□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Tm2d2Q8R0I4 213 aa12.38□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Gm16223Q8CBM3 117 aa12.37□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Trbv13-2A0A140T8N6 113 aa12.37□□□□□ -0.43
Col17a1-202ENSMUST00000086923 UqcrqQ9CQ69 82 aa12.37□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Igkv8-34A0A0G2JDU0 121 aa12.37□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Tmem131O70472 1877 aa12.37□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Ighv1-75A0A075B5Y2 117 aa12.37□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Ighv1-85A0A075B5Y6 117 aa12.36□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Cd164Q9R0L9 197 aa12.36□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Ighv3-1A0A075B5S6 116 aa12.36□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Gm5153P01627 120 aa12.35□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Smr3aQ61900 147 aa12.35□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Ighv2-6-8A0A0A6YWY9 116 aa12.34□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Gm17577J3QNF7 156 aa12.34□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Pcnx2Q5DU28 2122 aa12.34□□□□□ -0.43
Col17a1-202ENSMUST00000086923 Spint4Q9D263 159 aa12.34□□□□□ -0.43
Col17a1-202ENSMUST00000086923 TshbP12656 138 aa12.33□□□□□ -0.44
Col17a1-202ENSMUST00000086923 TeppQ6IMH0 216 aa12.33□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Nav2E9Q842 2432 aa12.33□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Crip2Q9DCT8 208 aaKnown RBP12.33□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Wnk1P83741 2377 aa12.33□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Gvin1Q80SU7 2427 aa12.33□□□□□ -0.44
Col17a1-202ENSMUST00000086923 4930546C10RikE9Q4Y3 121 aa12.33□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Gm17521F6QAC8 156 aa12.33□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Dkk4Q8VEJ3 221 aa12.33□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Col8a2P25318 699 aa12.32□□□□□ -0.44
Col17a1-202ENSMUST00000086923 P01823 113 aa12.32□□□□□ -0.44
Col17a1-202ENSMUST00000086923 P84751 237 aa12.32□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Eif4ebp1Q60876 117 aa12.32□□□□□ -0.44
Col17a1-202ENSMUST00000086923 1700074P13RikQ9D9G7 251 aa12.32□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Eml5Q8BQM8 1977 aa12.32□□□□□ -0.44
Col17a1-202ENSMUST00000086923 ScxQ64124 207 aa12.31□□□□□ -0.44
Col17a1-202ENSMUST00000086923 P01820 115 aa12.3□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Pglyrp1O88593 182 aa12.3□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Ighv10-1A0A0B4J1J6 119 aa12.29□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Gm11011D3Z3L9 86 aa12.29□□□□□ -0.44
Col17a1-202ENSMUST00000086923 GfyJ3KML8 504 aa12.29□□□□□ -0.44
Col17a1-202ENSMUST00000086923 4930518I15RikQ3V2W7 57 aa12.29□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Gm26566Q8CAC1 153 aa12.29□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Gm10401E9Q3K6 71 aa12.29□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Cnot1Q6ZQ08 2375 aaKnown RBP12.29□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Camk2n2Q78WH7 79 aa12.29□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Ntn5Q3UQ22 452 aa12.29□□□□□ -0.44
Col17a1-202ENSMUST00000086923 4930524J08RikQ9CUJ5 163 aa12.29□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Cox7b2Q9D2H1 82 aa12.28□□□□□ -0.44
Col17a1-202ENSMUST00000086923 1810032O08RikE9PZV8 113 aa12.28□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Gm10577Q3UDV9 132 aa12.28□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Fer1l4A3KGK3 1992 aa12.28□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Ighv1-82A0A0G2JEU7 117 aa12.28□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Tcl1b3P56842 122 aa12.28□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Pcdh15Q99PJ1 1943 aa12.28□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Gm9958Q8C9U4 106 aa12.27□□□□□ -0.44
Col17a1-202ENSMUST00000086923 Gm15557A6PWY0 234 aa12.27□□□□□ -0.44
Col17a1-202ENSMUST00000086923 PrcdQ00LT2 53 aa12.27□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Ighv2-7A0A075B5Q8 116 aa12.27□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Igkv8-18A0A0B4J1J3 123 aa12.27□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Cox7bP56393 80 aa12.27□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Ighv1-62-1A0A075B5U3 116 aa12.27□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Ighv1-72P01751 139 aa12.27□□□□□ -0.45
Col17a1-202ENSMUST00000086923 CnfnQ6PCW6 111 aa12.27□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Ptprz1B9EKR1 2312 aa12.26□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Wfdc10Q3V2J9 124 aa12.26□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Mapk1ip1lQ8BH93 242 aa12.26□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Thsd7bQ6P4U0 1607 aa12.25□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Polr2kQ63871 58 aa12.25□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Gm9805F6YK59 57 aa12.25□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Fam19a1Q7TPG8 133 aa12.25□□□□□ -0.45
Col17a1-202ENSMUST00000086923 DysfQ9ESD7 2090 aa12.24□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Col5a3Q9JLI2 1739 aa12.24□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Fhl1P97447 280 aaKnown RBP12.24□□□□□ -0.45
Col17a1-202ENSMUST00000086923 1700011M02RikB1AX35 88 aa12.24□□□□□ -0.45
Col17a1-202ENSMUST00000086923 SbsponQ3UPR9 264 aa12.24□□□□□ -0.45
Col17a1-202ENSMUST00000086923 2010109I03RikQ9CQ11 111 aa12.24□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Igkv1-110A0A0B4J1I0 119 aa12.24□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Igkv1-117A0A140T8M0 119 aa12.24□□□□□ -0.45
Col17a1-202ENSMUST00000086923 E030018B13RikJ3QMS9 113 aa12.23□□□□□ -0.45
Col17a1-202ENSMUST00000086923 CstadQ9D245 104 aa12.22□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Gm9970F6ZED4 185 aa12.22□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Med13lQ6JPI3 2207 aa12.22□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Kif26aQ52KG5 1881 aa12.22□□□□□ -0.45
Col17a1-202ENSMUST00000086923 A830005F24RikQ8BRT5 167 aa12.22□□□□□ -0.45
Col17a1-202ENSMUST00000086923 4930564D02RikQ9D4S4 103 aa12.22□□□□□ -0.45
Col17a1-202ENSMUST00000086923 Gm10735Q3US96 136 aa12.21□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms