RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Gm10251J3QPM5 127 aa11.25□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Prr9Q8BV84 116 aa11.25□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Socs3O35718 225 aa11.25□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Fam19a4Q7TPG5 135 aa11.25□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Mzt1Q8BUR9 78 aa11.25□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Nop10Q9CQS2 64 aa11.25□□□□□ -0.61
Scaf4-201ENSMUST00000039280 LhbO09108 141 aa11.24□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Hbb-b2P02089 147 aa11.24□□□□□ -0.61
Scaf4-201ENSMUST00000039280 TshbP12656 138 aa11.24□□□□□ -0.61
Scaf4-201ENSMUST00000039280 4930470P17RikQ9D542 155 aa11.24□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Atp5eP56382 52 aa11.24□□□□□ -0.61
Scaf4-201ENSMUST00000039280 BB014433Q8C5R5 389 aa11.24□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Trbv16A0A0B4J1H3 115 aa11.24□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Scgb1b2O35176 93 aa11.24□□□□□ -0.61
Scaf4-201ENSMUST00000039280 SvipQ3UZP4 77 aa11.24□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Ighv1-75A0A075B5Y2 117 aa11.23□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Ube2d1P61080 147 aaKnown RBP11.23□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Rnf183Q8QZS5 190 aa11.23□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Cdip1Q9DB75 208 aa11.23□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Odf1Q61999 247 aa11.23□□□□□ -0.61
Scaf4-201ENSMUST00000039280 BC048562Q80ZQ7 204 aa11.23□□□□□ -0.61
Scaf4-201ENSMUST00000039280 2310009B15RikA0A0A6YWI4 143 aa11.23□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Prp2P05143 317 aa11.23□□□□□ -0.61
Scaf4-201ENSMUST00000039280 SrarpQ3ULG3 163 aa11.23□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Wdr38Q9D994 303 aa11.23□□□□□ -0.61
Scaf4-201ENSMUST00000039280 C1qcQ02105 246 aa11.22□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Glrp1E9Q9S8 174 aa11.22□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Atp5g3P56384 141 aa11.22□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Defb2P82020 71 aa11.21□□□□□ -0.61
Scaf4-201ENSMUST00000039280 4930442H23RikQ9D5G7 103 aa11.21□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Cyyr1Q8VIH7 165 aa11.21□□□□□ -0.61
Scaf4-201ENSMUST00000039280 Trav4d-3A0A075B625 110 aa11.21□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Trav9d-3A0A075B695 113 aa11.21□□□□□ -0.62
Scaf4-201ENSMUST00000039280 DmdP11531 3678 aa11.21□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Prss58Q8BW11 241 aa11.2□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Ube2d3P61079 147 aa11.2□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Ube2d2P62838 147 aa11.2□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Q8R092 253 aa11.2□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Xcl1P47993 114 aa11.19□□□□□ -0.62
Scaf4-201ENSMUST00000039280 P84751 237 aa11.19□□□□□ -0.62
Scaf4-201ENSMUST00000039280 FshbQ60687 130 aa11.19□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Gm20726G3UX18 150 aa11.19□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Smrp1Q2MH31 260 aa11.19□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Ifitm1Q9D103 106 aa11.19□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Pglyrp4Q0VB07 374 aa11.18□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Cmc4Q61908 68 aa11.18□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Igkv4-70A0A0B4J1I5 116 aa11.17□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Fhl2O70433 279 aa11.17□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Cox17P56394 63 aa11.17□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Hist1h4aP62806 103 aaKnown RBP11.17□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Lyrm9Q3UN90 78 aa11.17□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Q99M08 65 aa11.17□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Vmo1Q5SXG7 201 aa11.17□□□□□ -0.62
Scaf4-201ENSMUST00000039280 FcorP0DJI6 106 aa11.16□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Hcfc1Q61191 2045 aaKnown RBP11.16□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Gcn1E9PVA8 2671 aaKnown RBP11.16□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Igkv1-99F6XWB2 120 aa11.16□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Gata1P17679 413 aa11.16□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Gatd1Q8BFQ8 220 aa11.16□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Trav13d-1A0A075B606 110 aa11.16□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Cfap126Q6P8X9 189 aa11.16□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Smr3aQ61900 147 aa11.15□□□□□ -0.62
Scaf4-201ENSMUST00000039280 1520401A03RikA0A0J9YVH6 598 aa11.15□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Psmb8P28063 276 aa11.15□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Zc2hc1bQ9D534 172 aa11.15□□□□□ -0.62
Scaf4-201ENSMUST00000039280 Gm7102J3QQ10 178 aa11.15□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Defa21Q8C1P2 93 aa11.15□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Gphb5Q812B2 130 aa11.14□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Ighv3-3A0A0A6YWL2 116 aa11.13□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Rpl32P62911 135 aaKnown RBP11.13□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Ang3P97802 145 aa11.13□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Pfn2Q9JJV2 140 aa11.12□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Igkv6-13A0A0G2JGY3 119 aa11.12□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Cox7a1P56392 80 aa11.12□□□□□ -0.63
Scaf4-201ENSMUST00000039280 SelenowP63300 88 aa11.12□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Gm16381A0A1Y7VKT9 73 aa11.11□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Gm8439G3UWA7 96 aa11.11□□□□□ -0.63
Scaf4-201ENSMUST00000039280 MalO09198 153 aa11.11□□□□□ -0.63
Scaf4-201ENSMUST00000039280 SpegQ62407 3262 aa11.1□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Zfp951A0A087WRH0 451 aa11.1□□□□□ -0.63
Scaf4-201ENSMUST00000039280 GfyJ3KML8 504 aa11.1□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Polr2kQ63871 58 aa11.1□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Gm21748Q3UE70 102 aa11.1□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Cep192E9Q4Y4 2514 aaKnown RBP11.1□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Ankrd17Q99NH0 2603 aaKnown RBP11.1□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Myo15aQ9QZZ4 3511 aa11.1□□□□□ -0.63
Scaf4-201ENSMUST00000039280 PrlhG3UWC3 86 aa11.1□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Dad1P61804 113 aa11.1□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Gm5464Q3UY29 175 aa11.1□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Defa20Q45VN2 95 aa11.1□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Defb29Q8BGW9 78 aa11.09□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Q9DAB9 146 aa11.09□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Pglyrp1O88593 182 aa11.09□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Trav9d-4A0A0G2JG37 103 aa11.09□□□□□ -0.63
Scaf4-201ENSMUST00000039280 Lst1O08843 95 aa11.08□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Crip2Q9DCT8 208 aaKnown RBP11.08□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Gm10135F6TEE5 83 aa11.08□□□□□ -0.64
Scaf4-201ENSMUST00000039280 A930009A15RikG3UYI6 118 aa11.08□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Ighv1-66A0A075B5X5 117 aa11.07□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Trav13n-1A0A0G2JEU8 110 aa11.07□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms