RNA–Protein interactions for RNA: ENSMUST00000192168.1

Pcdha5-201, Transcript of Protocadherin alpha 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha5, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha5-201ENSMUST00000192168 Ighv2-7A0A075B5Q8 116 aa11.32□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Ighv1-85A0A075B5Y6 117 aa11.32□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Vpreb2P13373 142 aa11.32□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Igkv4-74A0A0B4J1I3 119 aa11.32□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Map6d1Q14BB9 191 aa11.32□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Gm4861Q8C5A4 106 aa11.32□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Plxnb1Q8CJH3 2119 aa11.32□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Ncoa6Q9JL19 2067 aa11.31□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Trav13d-1A0A075B606 110 aa11.31□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Abca1P41233 2261 aa11.31□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Gm12689Q8BQU9 117 aa11.31□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 BlcapP62951 87 aa11.31□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Smim1P0C8K7 78 aa11.31□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 P18527 97 aa11.3□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Col6a6Q8C6K9 2265 aa11.3□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 1810032O08RikE9PZV8 113 aa11.3□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Gm7257D3YX25 99 aa11.3□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 B430305J03RikQ8BQQ8 176 aa11.3□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Tcf20Q9EPQ8 1987 aa11.3□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Igkv4-58A0A0G2JGI6 119 aa11.29□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 MifP34884 115 aaKnown RBP11.29□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Mapk1ip1lQ8BH93 242 aa11.29□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Armcx4E9PWM3 2356 aa11.29□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Ighv2-6-8A0A0A6YWY9 116 aa11.29□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Gm6899Q3USS0 134 aa11.29□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Tm2d2Q8R0I4 213 aa11.29□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Pla2g2dQ9WVF6 144 aa11.29□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Cep250Q60952 2414 aa11.29□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Tcl1b3P56842 122 aa11.28□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Gm12353A2AGJ4 60 aa11.28□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Mrpl52Q9D0Y8 121 aa11.28□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 Prp2P05143 317 aa11.27□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 A130051J06RikQ8CAU1 227 aa11.27□□□□□ -0.6
Pcdha5-201ENSMUST00000192168 CadB2RQC6 2225 aa11.27□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Ptprz1B9EKR1 2312 aa11.27□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Gm10518F6UQQ9 182 aa11.27□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Ccl21aP84444 133 aa11.27□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Ccl21bP86792 133 aa11.27□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Ccl21cP86793 133 aa11.27□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Eml6Q5SQM0 1958 aa11.27□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Cox7a1P56392 80 aa11.26□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Arfgef3Q3UGY8 2170 aa11.26□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Fgfbp3Q1HCM0 245 aa11.26□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 BikO70337 150 aa11.26□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 FcorP0DJI6 106 aa11.26□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Gm17472A0A075B683 117 aa11.25□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Wdr38Q9D994 303 aa11.25□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Tcte2E9PY37 120 aa11.25□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Igkv1-35A0A0G2JDE5 120 aa11.24□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Trav13d-4A0A0G2JFX3 110 aa11.24□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Q9D8Q6 235 aa11.24□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Sdk2Q6V4S5 2176 aa11.24□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Crybg1A0A0G2JG52 2065 aa11.24□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Gm1968Q3T9I3 115 aa11.24□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Col8a2P25318 699 aa11.24□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Wipf1Q8K1I7 493 aa11.24□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Gphb5Q812B2 130 aa11.23□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 P01747 120 aa11.23□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Sptan1P16546 2472 aaKnown RBP11.23□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Fam222aQ6PGH4 453 aa11.23□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Gm10542F6XDR3 90 aa11.23□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 P01820 115 aa11.23□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 PrcdQ00LT2 53 aa11.23□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Fam208bQ5DTT3 2382 aa11.22□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Ucn2Q99ML8 113 aa11.22□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Cox7b2Q9D2H1 82 aa11.22□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 AgrnA2ASQ1 1950 aa11.22□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Ighv3-3A0A0A6YWL2 116 aa11.22□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Igkv1-122A0A140T8M9 119 aa11.22□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Sprr3O09116 238 aa11.22□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Sox16Q62247 57 aa11.22□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Pla2g2eQ9QUL3 142 aa11.21□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Igkv2-109A0A075B5K6 120 aa11.21□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Ighv1-66A0A075B5X5 117 aa11.21□□□□□ -0.61
Pcdha5-201ENSMUST00000192168 Ighv13-2A0A0A6YWN3 119 aa11.21□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Sslp1Q3UN54 99 aa11.21□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Trav13n-2A0A0G2JF93 110 aa11.21□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Rpl39lQ9CQD0 51 aa11.21□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Ppp1r32Q148A4 427 aa11.2□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Pcnx3Q8VI59 2028 aa11.2□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Trav13-4-dv7A0A075B6C2 110 aa11.19□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Adamts20P59511 1906 aa11.19□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Gm10251J3QPM5 127 aa11.19□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Ebi3O35228 228 aa11.19□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 TshbP12656 138 aa11.19□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Vpreb1P13372 142 aa11.19□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Smr3aQ61900 147 aa11.19□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Gm2916Q9D9B9 127 aa11.19□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Fhl1P97447 280 aaKnown RBP11.19□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 P84751 237 aa11.18□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Klk12B2RVZ0 247 aa11.18□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Trav13-1A0A075B644 110 aa11.17□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Trav13-2A0A075B649 110 aa11.17□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Serp2Q6TAW2 65 aa11.17□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 4930470P17RikQ9D542 155 aa11.17□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Klk11Q9QYN3 276 aa11.17□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Polr2kQ63871 58 aa11.17□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Ube2d4D3YUH6 135 aa11.16□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Gm10322F7D7I4 111 aa11.16□□□□□ -0.62
Pcdha5-201ENSMUST00000192168 Ube2bP63147 152 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 61.3 ms