RNA–Protein interactions for RNA: ENSMUST00000187938.6

Fn1-211, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 7,965 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-211ENSMUST00000187938 Hist1h2bcQ6ZWY9 126 aaKnown RBP9.76□□□□□ -0.85
Fn1-211ENSMUST00000187938 Thsd7bQ6P4U0 1607 aa9.76□□□□□ -0.85
Fn1-211ENSMUST00000187938 Gm12355A2A4X6 163 aa9.75□□□□□ -0.85
Fn1-211ENSMUST00000187938 Srsf3P84104 164 aaKnown RBP9.75□□□□□ -0.85
Fn1-211ENSMUST00000187938 Ca5aP23589 299 aa9.75□□□□□ -0.85
Fn1-211ENSMUST00000187938 A230072I06RikQ3UUJ8 172 aa9.75□□□□□ -0.85
Fn1-211ENSMUST00000187938 Tnrc6aQ3UHK8 1896 aaKnown RBP9.75□□□□□ -0.85
Fn1-211ENSMUST00000187938 AtrxQ61687 2476 aaKnown RBP9.75□□□□□ -0.85
Fn1-211ENSMUST00000187938 Map6d1Q14BB9 191 aa9.75□□□□□ -0.85
Fn1-211ENSMUST00000187938 Gm6034E9Q101 117 aa9.75□□□□□ -0.85
Fn1-211ENSMUST00000187938 Trbv13-1A0A0B4J1P8 112 aa9.74□□□□□ -0.85
Fn1-211ENSMUST00000187938 Eml6Q5SQM0 1958 aa9.74□□□□□ -0.85
Fn1-211ENSMUST00000187938 Ighv1-77A0A0G2JGS9 117 aa9.74□□□□□ -0.85
Fn1-211ENSMUST00000187938 9430015G10RikA2ASP7 199 aa9.74□□□□□ -0.85
Fn1-211ENSMUST00000187938 Ighv8-12A0A0G2JDE1 119 aa9.74□□□□□ -0.85
Fn1-211ENSMUST00000187938 Rpl28P41105 137 aaKnown RBP9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 LtbP41155 306 aa9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 P01793 123 aa9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 StrcQ8VIM6 1809 aa9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 P01794 123 aa9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 Fxyd5P97808 178 aa9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 1500011B03RikQ3TTH7 73 aa9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 Trav12d-3A0A075B6A4 115 aa9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 Q08AU9 97 aa9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 Vopp1Q8R1C3 172 aa9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 Brk1Q91VR8 75 aa9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 Pmaip1Q9JM54 103 aa9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 FancmQ8BGE5 2021 aa9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 Zic4Q61467 341 aa9.73□□□□□ -0.85
Fn1-211ENSMUST00000187938 Spg11Q3UHA3 2430 aa9.72□□□□□ -0.85
Fn1-211ENSMUST00000187938 Gm10542F6XDR3 90 aa9.72□□□□□ -0.85
Fn1-211ENSMUST00000187938 P06329 120 aa9.72□□□□□ -0.85
Fn1-211ENSMUST00000187938 Pcnx3Q8VI59 2028 aa9.72□□□□□ -0.85
Fn1-211ENSMUST00000187938 Igkv1-35A0A0G2JDE5 120 aa9.72□□□□□ -0.85
Fn1-211ENSMUST00000187938 Defb11Q8R2I7 77 aa9.72□□□□□ -0.85
Fn1-211ENSMUST00000187938 Sdk1Q3UH53 2193 aa9.72□□□□□ -0.85
Fn1-211ENSMUST00000187938 Prok2Q9QXU7 128 aa9.72□□□□□ -0.85
Fn1-211ENSMUST00000187938 Ly6hQ9WUC3 139 aa9.72□□□□□ -0.85
Fn1-211ENSMUST00000187938 Hist1h2bfP10853 126 aa9.71□□□□□ -0.85
Fn1-211ENSMUST00000187938 Hist1h2bbQ64475 126 aa9.71□□□□□ -0.85
Fn1-211ENSMUST00000187938 Hist1h2bkQ8CGP1 126 aaKnown RBP9.71□□□□□ -0.85
Fn1-211ENSMUST00000187938 Hist1h2bpQ8CGP2 126 aaKnown RBP9.71□□□□□ -0.85
Fn1-211ENSMUST00000187938 Atp23Q9CWQ3 201 aa9.71□□□□□ -0.85
Fn1-211ENSMUST00000187938 P01789 122 aa9.71□□□□□ -0.86
Fn1-211ENSMUST00000187938 Vpreb2P13373 142 aa9.71□□□□□ -0.86
Fn1-211ENSMUST00000187938 Scn10aQ6QIY3 1958 aa9.71□□□□□ -0.86
Fn1-211ENSMUST00000187938 Rpl39lQ9CQD0 51 aa9.7□□□□□ -0.86
Fn1-211ENSMUST00000187938 SostQ99P68 211 aa9.7□□□□□ -0.86
Fn1-211ENSMUST00000187938 Gm9925F6T2U3 160 aa9.69□□□□□ -0.86
Fn1-211ENSMUST00000187938 Prr12E9PYL2 2035 aaKnown RBP9.69□□□□□ -0.86
Fn1-211ENSMUST00000187938 Klhdc3Q8VEM9 382 aa9.69□□□□□ -0.86
Fn1-211ENSMUST00000187938 2010109I03RikQ9CQ11 111 aa9.69□□□□□ -0.86
Fn1-211ENSMUST00000187938 Wfdc13Q5DQQ6 81 aa9.69□□□□□ -0.86
Fn1-211ENSMUST00000187938 Dido1Q8C9B9 2256 aaKnown RBP9.69□□□□□ -0.86
Fn1-211ENSMUST00000187938 P01791 123 aa9.69□□□□□ -0.86
Fn1-211ENSMUST00000187938 Tcrg-V5A0A0G2JGV5 113 aa9.69□□□□□ -0.86
Fn1-211ENSMUST00000187938 Defb45Q3V490 66 aa9.69□□□□□ -0.86
Fn1-211ENSMUST00000187938 Ube2d4D3YUH6 135 aa9.68□□□□□ -0.86
Fn1-211ENSMUST00000187938 Wfdc17Q5SSJ1 76 aa9.68□□□□□ -0.86
Fn1-211ENSMUST00000187938 Gm12689Q8BQU9 117 aa9.68□□□□□ -0.86
Fn1-211ENSMUST00000187938 Fhl2O70433 279 aa9.68□□□□□ -0.86
Fn1-211ENSMUST00000187938 Defb2P82020 71 aa9.68□□□□□ -0.86
Fn1-211ENSMUST00000187938 Ormdl1Q921I0 153 aa9.68□□□□□ -0.86
Fn1-211ENSMUST00000187938 Ccl17F6R5P4 103 aa9.67□□□□□ -0.86
Fn1-211ENSMUST00000187938 Mrpl35Q9CQL6 188 aa9.67□□□□□ -0.86
Fn1-211ENSMUST00000187938 Lce6aD3YV94 81 aa9.67□□□□□ -0.86
Fn1-211ENSMUST00000187938 Gp9O88186 177 aa9.67□□□□□ -0.86
Fn1-211ENSMUST00000187938 CrygeQ03740 174 aa9.67□□□□□ -0.86
Fn1-211ENSMUST00000187938 Cdkn2aQ64364 169 aa9.67□□□□□ -0.86
Fn1-211ENSMUST00000187938 CrygfQ9CXV3 174 aa9.67□□□□□ -0.86
Fn1-211ENSMUST00000187938 Serp2Q6TAW2 65 aa9.67□□□□□ -0.86
Fn1-211ENSMUST00000187938 Prr15lQ8JZM2 100 aa9.67□□□□□ -0.86
Fn1-211ENSMUST00000187938 Q9D8Q6 235 aa9.67□□□□□ -0.86
Fn1-211ENSMUST00000187938 Plxna3P70208 1872 aa9.67□□□□□ -0.86
Fn1-211ENSMUST00000187938 A830005F24RikQ8BRT5 167 aa9.67□□□□□ -0.86
Fn1-211ENSMUST00000187938 4933414I15RikQ9D4D5 133 aa9.67□□□□□ -0.86
Fn1-211ENSMUST00000187938 P06320 134 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 Gm27027S4R1M6 97 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 LctF8VPT3 1931 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 Trav12-3A0A075B648 115 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 Trav4-3A0A0B4J1K1 110 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 Gm20604F8WIA3 75 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 AngP21570 145 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 Fhl3Q9R059 289 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 Greb1Q3UHK3 1954 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 Ighv1-85A0A075B5Y6 117 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 Tal2Q62282 108 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 Hivep2Q3UHF7 2430 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 Brwd1Q921C3 2304 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 Gm19684G3UZ45 117 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 Plxna4Q80UG2 1893 aa9.66□□□□□ -0.86
Fn1-211ENSMUST00000187938 Ovol3D3YYM0 189 aa9.65□□□□□ -0.86
Fn1-211ENSMUST00000187938 Ccl25O35903 144 aa9.65□□□□□ -0.86
Fn1-211ENSMUST00000187938 Gm17606F6ZL36 78 aa9.65□□□□□ -0.86
Fn1-211ENSMUST00000187938 Inafm1E9PV59 130 aa9.65□□□□□ -0.86
Fn1-211ENSMUST00000187938 HelzQ6DFV5 1964 aaKnown RBP9.65□□□□□ -0.86
Fn1-211ENSMUST00000187938 Col4a5Q63ZW6 1691 aa9.65□□□□□ -0.87
Fn1-211ENSMUST00000187938 Tcl1b2P56841 117 aa9.65□□□□□ -0.87
Fn1-211ENSMUST00000187938 Rpl39P62892 51 aa9.65□□□□□ -0.87
Fn1-211ENSMUST00000187938 Dscaml1Q4VA61 2053 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 103.4 ms