RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 Il1f10Q8R459 152 aa12.58□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Gm1553Q66VB7 94 aa12.57□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Rpl11Q9CXW4 178 aaKnown RBP12.57□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Psmb11Q8BG41 302 aa12.56□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Gm5105Q8C6Y9 112 aa12.56□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Lgals6O54891 301 aa12.55□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 BB014433Q8C5R5 389 aa12.55□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Tmem14cQ9CQN6 114 aa12.55□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Dynlrb2Q9DAJ5 96 aa12.55□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Chd9Q8BYH8 2885 aa12.55□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 9530053A07RikE9PVG8 2581 aa12.55□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Sumo2P61957 95 aaKnown RBP12.55□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 A930009A15RikG3UYI6 118 aa12.54□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Gm28044L7N1X0 119 aa12.54□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Chd6A3KFM7 2711 aa12.54□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Ighv1-9A0A0A6YW37 117 aa12.53□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Q4KKZ1 196 aa12.53□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Cysltr1Q99JA4 352 aa12.53□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Rpl36-ps4A0A140T8U4 117 aa12.53□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Atp5eP56382 52 aa12.53□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Tmem170bP86050 132 aa12.53□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Spink2Q8BMY7 86 aa12.53□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Lgals4Q8K419 326 aa12.53□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Krtap26-1Q9D7N2 215 aa12.53□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Nat8b-psE0CYC6 232 aa12.52□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Psmb8P28063 276 aa12.52□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Khdc1cQ4KL78 166 aa12.52□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Ss18Q62280 418 aa12.52□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Zfp248Q640N4 576 aa12.52□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 CicQ924A2 2510 aa12.52□□□□□ -0.4
Hoxc4-202ENSMUST00000165375 Rpl13aP19253 203 aaKnown RBP12.52□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Dmrt3Q80WT2 476 aa12.52□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Ifi27l2aQ8R412 90 aa12.52□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 HilpdaQ9JLS0 64 aa12.52□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 4930447F04RikA2AFR2 126 aa12.51□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Avpi1Q9D7H4 142 aa12.51□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 4930596D02RikQ3V0H9 216 aa12.5□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Olfr313Q5NC55 308 aa12.5□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Morn3Q8C5T4 241 aa12.5□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Igkv4-69A0A0B4J1I6 116 aa12.5□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Gm2564F6Z9S8 108 aa12.5□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Ccl19O70460 108 aa12.5□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Wfdc15aQ8BH89 80 aa12.5□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Atp5lQ9CPQ8 103 aa12.5□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Setd2E9Q5F9 2537 aa12.49□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Gpr82Q8BZR0 328 aa12.49□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Gm3233E9Q2H5 230 aa12.49□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 SrarpQ3ULG3 163 aa12.49□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Phlda3Q9WV95 125 aa12.49□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Akap13E9Q394 2776 aa12.48□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Krtap24-1G3X9A2 248 aa12.48□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Tenm4Q3UHK6 2771 aa12.47□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Igkv20-101-2A0A0G2JDU3 113 aa12.47□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Gm42674D3YUT9 64 aa12.47□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Gm5629P06327 117 aa12.47□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Gm10735Q3US96 136 aa12.47□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Fbn1Q61554 2873 aaKnown RBP12.47□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 NpwA0A1L1STR8 176 aa12.47□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Smim20D3Z7Q2 69 aa12.47□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Fhl2O70433 279 aa12.47□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 CckP09240 115 aa12.47□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Triap1Q9D8Z2 76 aa12.47□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Igkv4-81A0A0G2JEY5 119 aa12.46□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Ang5Q5GAN1 145 aa12.46□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Odf1Q61999 247 aa12.46□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Gm16223Q8CBM3 117 aa12.46□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Q9DAB9 146 aa12.46□□□□□ -0.41
Hoxc4-202ENSMUST00000165375 Ighv2-7A0A075B5Q8 116 aa12.46□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Ighv1-64A0A075B5X3 117 aa12.46□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Ighv1-12A0A0A6YXJ9 117 aa12.46□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Ighv1-82A0A0G2JEU7 117 aa12.46□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Trbv17A0A140T8P8 114 aa12.46□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Cox6b1P56391 86 aaKnown RBP12.46□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Foxi2Q3I5G5 311 aa12.46□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Wnk1P83741 2377 aa12.46□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 P01750 117 aa12.45□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 TshbP12656 138 aa12.45□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Rpl32P62911 135 aaKnown RBP12.45□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Gm10271F6WY25 52 aa12.44□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Gm933J3QPC1 141 aa12.44□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Lyrm7Q9DA03 104 aa12.44□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Gm6793B2RXM2 351 aa12.43□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Rnf152Q8BG47 203 aa12.43□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Xirp2Q4U4S6 3784 aa12.43□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 P01739 132 aa12.43□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Ighv1-62-3P01754 117 aa12.43□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 S100a4P07091 101 aa12.43□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Rpl32-psP17932 135 aa12.43□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Gkn1Q9CR36 201 aa12.43□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Morn5Q9DAI9 170 aa12.43□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Q9DAQ5 155 aa12.43□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Igkv4-70A0A0B4J1I5 116 aa12.42□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Snrpd3P62320 126 aaKnown RBP12.42□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 PmvkQ9D1G2 192 aa12.42□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Rab37Q9JKM7 223 aa12.42□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 SmcpP15265 143 aa12.41□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Fhl1P97447 280 aaKnown RBP12.41□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Mrpl36Q99N90 102 aa12.41□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Gm904Q3V2L5 102 aa12.41□□□□□ -0.42
Hoxc4-202ENSMUST00000165375 Ighv5-9-1A0A0A6YVS4 126 aa12.4□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 89.7 ms