RNA–Protein interactions for RNA: ENSMUST00000065005.4

Atg4d-201, Transcript of Cysteine protease ATG4D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Atg4d, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4d-201ENSMUST00000065005 Vpreb3D3Z6J4 130 aa11.6□□□□□ -0.55
Atg4d-201ENSMUST00000065005 FshbQ60687 130 aa11.6□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Naa38Q9D2U5 125 aa11.6□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Pcdh15Q99PJ1 1943 aa11.6□□□□□ -0.55
Atg4d-201ENSMUST00000065005 E130114P18RikF6S0S7 154 aa11.6□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Iglc1A0A0G2JE99 106 aa11.6□□□□□ -0.55
Atg4d-201ENSMUST00000065005 P01843 105 aa11.6□□□□□ -0.55
Atg4d-201ENSMUST00000065005 A230072I06RikQ3UUJ8 172 aa11.6□□□□□ -0.55
Atg4d-201ENSMUST00000065005 P01820 115 aa11.59□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Cox7cP17665 63 aa11.59□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Brk1Q91VR8 75 aa11.59□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Trav11A0A0B4J1J9 114 aa11.59□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Igkv8-21A0A140T8P7 120 aa11.59□□□□□ -0.55
Atg4d-201ENSMUST00000065005 P04944 107 aa11.59□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Gphb5Q812B2 130 aa11.59□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Gm10295Q8CCF3 114 aa11.59□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Plxnb1Q8CJH3 2119 aa11.59□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Esm1Q9QYY7 184 aa11.58□□□□□ -0.55
Atg4d-201ENSMUST00000065005 P01747 120 aa11.58□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Gm8251F6VUT6 1994 aa11.57□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Greb1Q3UHK3 1954 aa11.57□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Gm42674D3YUT9 64 aa11.57□□□□□ -0.56
Atg4d-201ENSMUST00000065005 P06328 117 aa11.57□□□□□ -0.56
Atg4d-201ENSMUST00000065005 7420426K07RikQ3UX66 186 aa11.57□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Ly6c2P0CW03 131 aa11.57□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Gm9958Q8C9U4 106 aa11.57□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Rpl39lQ9CQD0 51 aa11.57□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Mrpl52Q9D0Y8 121 aa11.57□□□□□ -0.56
Atg4d-201ENSMUST00000065005 1700010B08RikQ9DAI7 102 aa11.57□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Tnfrsf23Q9ER63 176 aa11.57□□□□□ -0.56
Atg4d-201ENSMUST00000065005 FancmQ8BGE5 2021 aa11.56□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Gm17521F6QAC8 156 aa11.56□□□□□ -0.56
Atg4d-201ENSMUST00000065005 AvpP35455 168 aa11.56□□□□□ -0.56
Atg4d-201ENSMUST00000065005 AW146154Q3TPQ7 468 aa11.56□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Sprr3O09116 238 aa11.56□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Heatr5aQ5PRF0 2038 aa11.56□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Gm4707V9GXN5 68 aa11.56□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Col5a3Q9JLI2 1739 aa11.56□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Igkv4-92A0A0B4J1I2 117 aa11.56□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Fxyd5P97808 178 aa11.56□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Ufsp1Q9CZP0 217 aa11.56□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Sec61gP60060 68 aa11.55□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Sdk2Q6V4S5 2176 aa11.55□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Ighv8-12A0A0G2JDE1 119 aa11.55□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Tfpi2O35536 230 aa11.55□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Arfgef3Q3UGY8 2170 aa11.55□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Cryba4Q9JJV0 196 aa11.55□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Dopey2Q3UHQ6 2295 aa11.54□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Ncor1Q60974 2453 aa11.54□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Defb13Q8R2I4 64 aa11.54□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Ighv1-85A0A075B5Y6 117 aa11.53□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Ighv1-62-1A0A075B5U3 116 aa11.53□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Obox8V9GWY9 217 aa11.53□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Lce6aD3YV94 81 aa11.53□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Gm10401E9Q3K6 71 aa11.53□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Ccdc179J3QM76 67 aa11.53□□□□□ -0.56
Atg4d-201ENSMUST00000065005 NpyP57774 97 aa11.53□□□□□ -0.56
Atg4d-201ENSMUST00000065005 Lmo4P61969 165 aa11.52□□□□□ -0.56
Atg4d-201ENSMUST00000065005 SbsponQ3UPR9 264 aa11.52□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Arhgap21Q6DFV3 1944 aa11.52□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Ighv1-63A0A075B5X2 117 aa11.52□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Sptan1P16546 2472 aaKnown RBP11.51□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Oxld1Q9CR10 201 aa11.51□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Anapc1P53995 1944 aaKnown RBP11.51□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Ormdl1Q921I0 153 aa11.51□□□□□ -0.57
Atg4d-201ENSMUST00000065005 MgamB5THE2 1827 aa11.5□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Gm9925F6T2U3 160 aa11.5□□□□□ -0.57
Atg4d-201ENSMUST00000065005 CenpeQ6RT24 2474 aaKnown RBP11.5□□□□□ -0.57
Atg4d-201ENSMUST00000065005 2010109I03RikQ9CQ11 111 aa11.5□□□□□ -0.57
Atg4d-201ENSMUST00000065005 AtrxQ61687 2476 aaKnown RBP11.5□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Mlst8Q9DCJ1 326 aa11.49□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Col6a6Q8C6K9 2265 aa11.49□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Plac8l1Q08EJ0 177 aa11.48□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Col24a1Q30D77 1733 aa11.48□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Gm17359A0A0G2JEB7 487 aa11.48□□□□□ -0.57
Atg4d-201ENSMUST00000065005 CrygcQ61597 174 aa11.48□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Igkv1-117A0A140T8M0 119 aa11.48□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Odf3Q920N1 254 aa11.48□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Ly6gP35461 111 aa11.48□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Usf3B2RUQ2 2221 aa11.47□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Q9D8Q6 235 aa11.47□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Prpf8Q99PV0 2335 aaKnown RBP11.47□□□□□ -0.57
Atg4d-201ENSMUST00000065005 5730596B20RikQ8BQ08 205 aa11.47□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Fam19a5Q91WE9 132 aa11.47□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Q9D131 166 aa11.47□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Tet1Q3URK3 2007 aaKnown RBP11.47□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Abca4O35600 2310 aa11.46□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Tcte2E9PY37 120 aa11.46□□□□□ -0.57
Atg4d-201ENSMUST00000065005 P01674 108 aa11.46□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Wfdc15aQ8BH89 80 aa11.46□□□□□ -0.57
Atg4d-201ENSMUST00000065005 Snai3Q9QY31 287 aa11.45□□□□□ -0.58
Atg4d-201ENSMUST00000065005 Ndufa4l2Q4FZG9 87 aa11.45□□□□□ -0.58
Atg4d-201ENSMUST00000065005 Eif4ebp1Q60876 117 aa11.45□□□□□ -0.58
Atg4d-201ENSMUST00000065005 Q9CX25 107 aa11.45□□□□□ -0.58
Atg4d-201ENSMUST00000065005 Ighv1-82A0A0G2JEU7 117 aa11.45□□□□□ -0.58
Atg4d-201ENSMUST00000065005 Ighv1-75A0A075B5Y2 117 aa11.45□□□□□ -0.58
Atg4d-201ENSMUST00000065005 Gm5878E9PUB3 99 aa11.44□□□□□ -0.58
Atg4d-201ENSMUST00000065005 Gm21060J3KMU4 56 aa11.44□□□□□ -0.58
Atg4d-201ENSMUST00000065005 SvipQ3UZP4 77 aa11.44□□□□□ -0.58
Atg4d-201ENSMUST00000065005 E130116L18RikQ8BMV6 101 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 54.3 ms