RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 P06320 134 aa8.12□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Rpl39P62892 51 aa8.12□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Gm44965A0A0N4SVR3 59 aa8.12□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Cfap126Q6P8X9 189 aa8.12□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Wfdc10Q3V2J9 124 aa8.11□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Gm5941Q497P9 117 aa8.11□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Ighv1-52A0A0A6YXC3 117 aa8.11□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Col5a3Q9JLI2 1739 aa8.11□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Gm10518F6UQQ9 182 aa8.11□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Kiaa1549Q68FD9 1940 aa8.11□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Colca2F8VPY8 239 aa8.11□□□□□ -1.11
Col6a3-201ENSMUST00000056925 A730015C16RikQ8C992 119 aa8.11□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Hoxb4P10284 250 aa8.11□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Ighv8-5A0A0A6YY60 119 aa8.1□□□□□ -1.11
Col6a3-201ENSMUST00000056925 4930546C10RikE9Q4Y3 121 aa8.1□□□□□ -1.11
Col6a3-201ENSMUST00000056925 P01786 117 aa8.1□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Tln1P26039 2541 aaKnown RBP8.1□□□□□ -1.11
Col6a3-201ENSMUST00000056925 A130051J06RikQ8CAU1 227 aa8.1□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Tfpi2O35536 230 aa8.09□□□□□ -1.11
Col6a3-201ENSMUST00000056925 LitafQ9JLJ0 161 aa8.09□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Col24a1Q30D77 1733 aa8.09□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Smrp1Q2MH31 260 aa8.09□□□□□ -1.11
Col6a3-201ENSMUST00000056925 P01729 129 aa8.09□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Ly6c1P0CW02 131 aa8.09□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Zfp36l1P23950 338 aa8.09□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Snai3Q9QY31 287 aa8.09□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Ighv2-6A0A075B6A7 116 aa8.09□□□□□ -1.11
Col6a3-201ENSMUST00000056925 Ube2e1P52482 193 aa8.09□□□□□ -1.11
Col6a3-201ENSMUST00000056925 ArtnQ9Z0L2 224 aa8.09□□□□□ -1.11
Col6a3-201ENSMUST00000056925 AmelxP63277 210 aa8.09□□□□□ -1.11
Col6a3-201ENSMUST00000056925 C1qcQ02105 246 aa8.09□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Tm2d1Q99MB3 208 aa8.09□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Rnf114Q9ET26 229 aa8.08□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Trbv13-1A0A0B4J1P8 112 aa8.08□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Cd59aO55186 123 aa8.08□□□□□ -1.12
Col6a3-201ENSMUST00000056925 P04946 108 aa8.08□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Fxyd5P97808 178 aa8.08□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Lypd8Q9D7S0 255 aa8.08□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Trav13n-2A0A0G2JF93 110 aa8.07□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Wisp3D3Z5L9 354 aa8.07□□□□□ -1.12
Col6a3-201ENSMUST00000056925 9530003J23RikQ8BM26 151 aa8.07□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Igkv12-89A0A0G2JGW8 112 aa8.07□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Ighv1-77A0A0G2JGS9 117 aa8.07□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Fstl3Q9EQC7 256 aa8.07□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Gm7257D3YX25 99 aa8.07□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Gp9O88186 177 aa8.07□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Msrb2Q78J03 175 aa8.07□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Fam110aQ8R184 296 aa8.07□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Trav9n-4A0A075B631 113 aa8.07□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Prok1Q14A28 105 aa8.07□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Gm12689Q8BQU9 117 aa8.07□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Hivep2Q3UHF7 2430 aa8.06□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Ighv1-64A0A075B5X3 117 aa8.06□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Sslp1Q3UN54 99 aa8.06□□□□□ -1.12
Col6a3-201ENSMUST00000056925 P06330 118 aa8.06□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Loxl1P97873 607 aa8.06□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Sptbn4E9PX29 2561 aa8.06□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Trav13n-1A0A0G2JEU8 110 aa8.06□□□□□ -1.12
Col6a3-201ENSMUST00000056925 MsmpB1AWI6 139 aa8.06□□□□□ -1.12
Col6a3-201ENSMUST00000056925 1500011B03RikQ3TTH7 73 aa8.06□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Gm17359A0A0G2JEB7 487 aa8.06□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Ighv1-50A0A075B5W1 117 aa8.05□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Foxs1Q61574 329 aa8.05□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Trav13d-1A0A075B606 110 aa8.05□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Csrp1P97315 193 aaKnown RBP8.05□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Fam216bQ8CC14 138 aa8.05□□□□□ -1.12
Col6a3-201ENSMUST00000056925 P01674 108 aa8.05□□□□□ -1.12
Col6a3-201ENSMUST00000056925 P01649 108 aa8.05□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Pglyrp1O88593 182 aa8.05□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Nop10Q9CQS2 64 aa8.05□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Notch2O35516 2470 aa8.04□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Ighv3-4A0A0A6YXF1 117 aa8.04□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Igkv3-5A0A140T8M6 119 aa8.04□□□□□ -1.12
Col6a3-201ENSMUST00000056925 OdaphJ3QNT8 126 aa8.04□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Ttc28Q80XJ3 2450 aa8.03□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Ighv3-6P18531 116 aa8.03□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Tm2d2Q8R0I4 213 aa8.03□□□□□ -1.12
Col6a3-201ENSMUST00000056925 4930470P17RikQ9D542 155 aa8.03□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Fhl4Q8CDC8 279 aa8.03□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Klk11Q9QYN3 276 aa8.03□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Ypel4Q65Z93 127 aa8.03□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Reg3gO09049 174 aa8.03□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Spag11Q8K4N2 71 aa8.02□□□□□ -1.12
Col6a3-201ENSMUST00000056925 Gm17521F6QAC8 156 aa8.02□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Lrp4Q8VI56 1905 aa8.02□□□□□ -1.13
Col6a3-201ENSMUST00000056925 LoxP28301 411 aa8.02□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Ighv1-4A0A075B5T4 117 aa8.02□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Ighv1-74A0A0G2JGK2 117 aa8.02□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Wdr90Q6ZPG2 1874 aa8.02□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Igkv1-88A0A140T8N1 120 aa8.02□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Trav13d-4A0A0G2JFX3 110 aa8.02□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Prh1P05142 261 aa8.02□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Cd164Q9R0L9 197 aa8.02□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Ighv13-2A0A0A6YWN3 119 aa8.01□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Trav13-1A0A075B644 110 aa8.01□□□□□ -1.13
Col6a3-201ENSMUST00000056925 1700084M14RikB1AT01 78 aa8.01□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Ighv1-62-1A0A075B5U3 116 aa8.01□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Cox7b2Q9D2H1 82 aa8.01□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Ankhd1E9PUR0 2548 aaKnown RBP8.01□□□□□ -1.13
Col6a3-201ENSMUST00000056925 Igkv3-4A0A140T8Q4 119 aa8.01□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 76.9 ms