RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 OdaphJ3QNT8 126 aa10.93□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 SmcpP15265 143 aa10.93□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Rmi2Q3UPE3 149 aa10.93□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Ubtd1Q91WB7 227 aa10.93□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Ss18l2Q9D174 77 aa10.93□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 AY761184Q9D848 116 aa10.93□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Egr1P08046 533 aa10.92□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Lmo4P61969 165 aa10.92□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Ighv2-6-8A0A0A6YWY9 116 aa10.92□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Gata1P17679 413 aa10.92□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 4930415O20RikQ8CDT5 131 aa10.92□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Cox6cQ9CPQ1 76 aa10.92□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 P06329 120 aa10.91□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Spag11Q8K4N2 71 aa10.91□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 3110018I06RikQ9CXS0 120 aa10.91□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Ighv1-63A0A075B5X2 117 aa10.9□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Gm9887F6RFI0 207 aa10.9□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Casp6O08738 276 aa10.9□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 3110070M22RikQ9DAQ7 118 aa10.9□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Glrp1E9Q9S8 174 aa10.9□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Gm17455G3UW87 128 aa10.9□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Krtap26-1Q9D7N2 215 aa10.9□□□□□ -0.66
Ushbp1-201ENSMUST00000049184 Fbn2Q61555 2907 aa10.9□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Hcfc1Q61191 2045 aaKnown RBP10.89□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Gm20730A0A075B5J6 119 aa10.89□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Tmem101Q91VP7 257 aa10.89□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Znf580Q9DB38 172 aa10.89□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Trav3-4A0A075B654 114 aa10.89□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Edn2P22389 175 aa10.89□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Ndufa3Q9CQ91 84 aa10.89□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Ndufa11Q9D8B4 141 aa10.89□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Ighv5-8A0A075B676 92 aa10.88□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Cela2aP05208 271 aa10.88□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Pla2g2aP31482 146 aa10.88□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 GalmQ8K157 342 aa10.88□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Ly86O88188 162 aa10.87□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 SbsponQ3UPR9 264 aa10.87□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Lrcol1Q3URS3 161 aa10.87□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Eif4ebp1Q60876 117 aa10.87□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Gatd1Q8BFQ8 220 aa10.87□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 BlcapP62951 87 aa10.86□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Tcf15Q60756 195 aa10.86□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Usmg5Q78IK2 58 aa10.86□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 H1fxQ80ZM5 188 aa10.86□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Ndufs7Q9DC70 224 aa10.86□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Timm17bQ9Z0V7 172 aa10.86□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 SetxA2AKX3 2646 aa10.86□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Msrb2Q78J03 175 aa10.86□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Trav4-3A0A0B4J1K1 110 aa10.85□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Lama5Q61001 3718 aa10.85□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Krtap27-1E9PX37 202 aa10.85□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 P01753 117 aa10.85□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Defa1P11477 93 aa10.85□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 SpinklQ8CEK3 90 aa10.85□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Trav13d-1A0A075B606 110 aa10.84□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Eif4ebp3Q80VV3 101 aa10.84□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 AI854703Q8BIN3 203 aa10.84□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Prelid3aQ8VE85 172 aa10.84□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Fam216aQ9DB54 251 aa10.84□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 MsmbO08540 113 aa10.84□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Sprr3O09116 238 aa10.84□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Snrpd3P62320 126 aaKnown RBP10.84□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Apoc4Q61268 124 aa10.84□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Gm9922Q8C3P1 144 aa10.84□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Gm4861Q8C5A4 106 aa10.84□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 HampQ9EQ21 83 aa10.84□□□□□ -0.67
Ushbp1-201ENSMUST00000049184 Tln1P26039 2541 aaKnown RBP10.83□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Wfdc15aQ8BH89 80 aa10.83□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 RetnQ99P87 114 aa10.83□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Spink12Q9D256 87 aa10.83□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Smim10l1A0A087WNQ7 89 aa10.82□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Gm11020F6ZGD5 61 aa10.82□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Spry2Q9QXV8 315 aa10.82□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Gm29666A0A087WQ99 126 aa10.81□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Gm10553J3QPF1 123 aa10.81□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Gm9747Q810H1 104 aa10.81□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Fgf23Q9EPC2 251 aa10.81□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Ptprz1B9EKR1 2312 aa10.81□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Med13lQ6JPI3 2207 aa10.81□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Ighv2-3A0A075B696 115 aa10.8□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Bri3P28662 125 aa10.8□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Adgrg4B7ZCC9 3073 aa10.8□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Phpt1Q9DAK9 124 aa10.8□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Abca4O35600 2310 aa10.8□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Ighv1-11A0A0A6YWI9 117 aa10.79□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Gm10490F6VBM2 120 aa10.79□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Defa16P50714 93 aa10.79□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Defa2P28309 93 aa10.79□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Igkv4-91A0A075B5L2 119 aa10.78□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Ighv1-72P01751 139 aa10.78□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 CirbpP60824 172 aaKnown RBP10.78□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 TeppQ6IMH0 216 aa10.78□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 4930564D02RikQ9D4S4 103 aa10.78□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Cd164l2Q9D6W7 172 aa10.78□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Gm10322F7D7I4 111 aa10.78□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Gm10226O88253 85 aa10.78□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Znf740Q6NZQ6 180 aa10.78□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Esm1Q9QYY7 184 aa10.78□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Fam208bQ5DTT3 2382 aa10.77□□□□□ -0.68
Ushbp1-201ENSMUST00000049184 Trdv5A0A075B661 115 aa10.77□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 1713.8 ms