RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ifi27l2aQ8R412 90 aa9.94□□□□□ -0.82
Nup88-201ENSMUST00000035283 Tmem263Q9DAM7 115 aa9.94□□□□□ -0.82
Nup88-201ENSMUST00000035283 Akap6E9Q9K8 2307 aa9.94□□□□□ -0.82
Nup88-201ENSMUST00000035283 Igkv4-62A0A0G2JDW9 117 aa9.94□□□□□ -0.82
Nup88-201ENSMUST00000035283 Gm20499D3Z4G5 72 aa9.94□□□□□ -0.82
Nup88-201ENSMUST00000035283 Sprr3O09116 238 aa9.94□□□□□ -0.82
Nup88-201ENSMUST00000035283 Mfap4Q9D1H9 257 aa9.94□□□□□ -0.82
Nup88-201ENSMUST00000035283 Ccl24Q9JKC0 119 aa9.94□□□□□ -0.82
Nup88-201ENSMUST00000035283 Celsr2Q9R0M0 2920 aa9.93□□□□□ -0.82
Nup88-201ENSMUST00000035283 Trbv16A0A0B4J1H3 115 aa9.93□□□□□ -0.82
Nup88-201ENSMUST00000035283 Fam19a4Q7TPG5 135 aa9.93□□□□□ -0.82
Nup88-201ENSMUST00000035283 Ighv1-85A0A075B5Y6 117 aa9.93□□□□□ -0.82
Nup88-201ENSMUST00000035283 Prr13Q9CQJ5 137 aa9.93□□□□□ -0.82
Nup88-201ENSMUST00000035283 Casp6O08738 276 aa9.92□□□□□ -0.82
Nup88-201ENSMUST00000035283 Ighv1-5A0A0A6YWG2 117 aa9.92□□□□□ -0.82
Nup88-201ENSMUST00000035283 AI854703Q8BIN3 203 aa9.92□□□□□ -0.82
Nup88-201ENSMUST00000035283 Lgals4Q8K419 326 aa9.92□□□□□ -0.82
Nup88-201ENSMUST00000035283 Cyyr1Q8VIH7 165 aa9.92□□□□□ -0.82
Nup88-201ENSMUST00000035283 PlaurP35456 327 aa9.91□□□□□ -0.82
Nup88-201ENSMUST00000035283 Samd5Q3V1H9 173 aa9.91□□□□□ -0.82
Nup88-201ENSMUST00000035283 Usmg5Q78IK2 58 aa9.91□□□□□ -0.82
Nup88-201ENSMUST00000035283 MrapQ9D159 127 aa9.91□□□□□ -0.82
Nup88-201ENSMUST00000035283 Phlda3Q9WV95 125 aa9.91□□□□□ -0.82
Nup88-201ENSMUST00000035283 Pkd1l2Q7TN88 2461 aa9.91□□□□□ -0.82
Nup88-201ENSMUST00000035283 Abca2P41234 2434 aa9.91□□□□□ -0.82
Nup88-201ENSMUST00000035283 Ncor2Q9WU42 2472 aaKnown RBP9.91□□□□□ -0.82
Nup88-201ENSMUST00000035283 Ndufs7Q9DC70 224 aa9.91□□□□□ -0.82
Nup88-201ENSMUST00000035283 Gm29666A0A087WQ99 126 aa9.9□□□□□ -0.82
Nup88-201ENSMUST00000035283 Smrp1Q2MH31 260 aa9.9□□□□□ -0.82
Nup88-201ENSMUST00000035283 Krtap26-1Q9D7N2 215 aa9.9□□□□□ -0.82
Nup88-201ENSMUST00000035283 AY761184Q9D848 116 aa9.9□□□□□ -0.82
Nup88-201ENSMUST00000035283 Gcn1E9PVA8 2671 aaKnown RBP9.9□□□□□ -0.82
Nup88-201ENSMUST00000035283 Trav7d-3Q5R1I1 112 aa9.9□□□□□ -0.83
Nup88-201ENSMUST00000035283 Itpr3P70227 2670 aa9.89□□□□□ -0.83
Nup88-201ENSMUST00000035283 Rpl32-psP17932 135 aa9.89□□□□□ -0.83
Nup88-201ENSMUST00000035283 LystP97412 3788 aa9.89□□□□□ -0.83
Nup88-201ENSMUST00000035283 PspnO70300 156 aa9.89□□□□□ -0.83
Nup88-201ENSMUST00000035283 Pla2g2cP48076 150 aa9.89□□□□□ -0.83
Nup88-201ENSMUST00000035283 1700020N15RikL7MTX3 112 aa9.88□□□□□ -0.83
Nup88-201ENSMUST00000035283 P01753 117 aa9.88□□□□□ -0.83
Nup88-201ENSMUST00000035283 Gm10226O88253 85 aa9.88□□□□□ -0.83
Nup88-201ENSMUST00000035283 Atp5g3P56384 141 aa9.88□□□□□ -0.83
Nup88-201ENSMUST00000035283 Cfap126Q6P8X9 189 aa9.88□□□□□ -0.83
Nup88-201ENSMUST00000035283 Nhlrc1Q8BR37 401 aa9.88□□□□□ -0.83
Nup88-201ENSMUST00000035283 Znf580Q9DB38 172 aa9.88□□□□□ -0.83
Nup88-201ENSMUST00000035283 Gm20730A0A075B5J6 119 aa9.87□□□□□ -0.83
Nup88-201ENSMUST00000035283 Trav9-2A0A075B647 113 aa9.87□□□□□ -0.83
Nup88-201ENSMUST00000035283 Ighv2-3A0A075B696 115 aa9.87□□□□□ -0.83
Nup88-201ENSMUST00000035283 Trav9-4A0A0B4J1K2 113 aa9.87□□□□□ -0.83
Nup88-201ENSMUST00000035283 TtrP07309 147 aa9.87□□□□□ -0.83
Nup88-201ENSMUST00000035283 Rmi2Q3UPE3 149 aa9.87□□□□□ -0.83
Nup88-201ENSMUST00000035283 Ighv1-63A0A075B5X2 117 aa9.87□□□□□ -0.83
Nup88-201ENSMUST00000035283 A530064D06RikQ8BNV8 229 aa9.87□□□□□ -0.83
Nup88-201ENSMUST00000035283 Ighv2-7A0A075B5Q8 116 aa9.86□□□□□ -0.83
Nup88-201ENSMUST00000035283 OtogO55225 2910 aa9.86□□□□□ -0.83
Nup88-201ENSMUST00000035283 Utp20Q5XG71 2788 aaKnown RBP9.86□□□□□ -0.83
Nup88-201ENSMUST00000035283 Gm10251J3QPM5 127 aa9.85□□□□□ -0.83
Nup88-201ENSMUST00000035283 Ly6gP35461 111 aa9.85□□□□□ -0.83
Nup88-201ENSMUST00000035283 Snrpd3P62320 126 aaKnown RBP9.85□□□□□ -0.83
Nup88-201ENSMUST00000035283 Taf15Q8BQ46 557 aaKnown RBP9.85□□□□□ -0.83
Nup88-201ENSMUST00000035283 1810032O08RikE9PZV8 113 aa9.85□□□□□ -0.83
Nup88-201ENSMUST00000035283 P06329 120 aa9.85□□□□□ -0.83
Nup88-201ENSMUST00000035283 Bri3P28662 125 aa9.85□□□□□ -0.83
Nup88-201ENSMUST00000035283 Lrcol1Q3URS3 161 aa9.85□□□□□ -0.83
Nup88-201ENSMUST00000035283 Gm29423A0A087WRM1 55 aa9.84□□□□□ -0.83
Nup88-201ENSMUST00000035283 Trav13d-1A0A075B606 110 aa9.84□□□□□ -0.83
Nup88-201ENSMUST00000035283 Gm9887F6RFI0 207 aa9.84□□□□□ -0.83
Nup88-201ENSMUST00000035283 Gm10490F6VBM2 120 aa9.84□□□□□ -0.83
Nup88-201ENSMUST00000035283 Gm17455G3UW87 128 aa9.84□□□□□ -0.83
Nup88-201ENSMUST00000035283 Trav7-6A0A075B640 112 aa9.83□□□□□ -0.84
Nup88-201ENSMUST00000035283 Ighv1-52A0A0A6YXC3 117 aa9.83□□□□□ -0.84
Nup88-201ENSMUST00000035283 Rbmy1bQ60990 380 aa9.83□□□□□ -0.84
Nup88-201ENSMUST00000035283 3110070M22RikQ9DAQ7 118 aa9.83□□□□□ -0.84
Nup88-201ENSMUST00000035283 Gm6793B2RXM2 351 aa9.82□□□□□ -0.84
Nup88-201ENSMUST00000035283 P04219 140 aa9.82□□□□□ -0.84
Nup88-201ENSMUST00000035283 Gata1P17679 413 aa9.82□□□□□ -0.84
Nup88-201ENSMUST00000035283 Gm4861Q8C5A4 106 aa9.82□□□□□ -0.84
Nup88-201ENSMUST00000035283 Lyrm7Q9DA03 104 aa9.82□□□□□ -0.84
Nup88-201ENSMUST00000035283 Ighv2-6-8A0A0A6YWY9 116 aa9.81□□□□□ -0.84
Nup88-201ENSMUST00000035283 4930415O20RikQ8CDT5 131 aa9.81□□□□□ -0.84
Nup88-201ENSMUST00000035283 FlncQ8VHX6 2726 aaKnown RBP9.81□□□□□ -0.84
Nup88-201ENSMUST00000035283 Krtap27-1E9PX37 202 aa9.81□□□□□ -0.84
Nup88-201ENSMUST00000035283 B230217C12RikE9Q3Z1 139 aa9.81□□□□□ -0.84
Nup88-201ENSMUST00000035283 Gm9936Q8C864 160 aa9.81□□□□□ -0.84
Nup88-201ENSMUST00000035283 Fgf23Q9EPC2 251 aa9.81□□□□□ -0.84
Nup88-201ENSMUST00000035283 Eif4ebp3Q80VV3 101 aa9.8□□□□□ -0.84
Nup88-201ENSMUST00000035283 Ifitm1Q9D103 106 aa9.8□□□□□ -0.84
Nup88-201ENSMUST00000035283 Synj2bpQ9D6K5 145 aa9.8□□□□□ -0.84
Nup88-201ENSMUST00000035283 Wdr38Q9D994 303 aa9.8□□□□□ -0.84
Nup88-201ENSMUST00000035283 Chd8Q09XV5 2582 aaKnown RBP9.8□□□□□ -0.84
Nup88-201ENSMUST00000035283 AngP21570 145 aa9.8□□□□□ -0.84
Nup88-201ENSMUST00000035283 4930564D02RikQ9D4S4 103 aa9.8□□□□□ -0.84
Nup88-201ENSMUST00000035283 Ep300B2RWS6 2412 aa9.8□□□□□ -0.84
Nup88-201ENSMUST00000035283 CenpwQ3URR0 86 aa9.79□□□□□ -0.84
Nup88-201ENSMUST00000035283 Gm11020F6ZGD5 61 aa9.78□□□□□ -0.84
Nup88-201ENSMUST00000035283 Gm10767Q3TQP0 103 aa9.78□□□□□ -0.84
Nup88-201ENSMUST00000035283 Ube2wQ8VDW4 151 aa9.78□□□□□ -0.84
Nup88-201ENSMUST00000035283 Igfn1Q3KNY0 2849 aa9.78□□□□□ -0.84
Nup88-201ENSMUST00000035283 Igkv4-91A0A075B5L2 119 aa9.78□□□□□ -0.84
Nup88-201ENSMUST00000035283 Glrp1E9Q9S8 174 aa9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 63.8 ms