RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 DysfQ9ESD7 2090 aa3.72□□□□□ -1.81
Clk1-201ENSMUST00000034868 Wdfy4E9Q2M9 3149 aa3.72□□□□□ -1.81
Clk1-201ENSMUST00000034868 Trav4n-4A0A075B615 110 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 Ighv7-4A0A0A6YXL5 121 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 Tmem141A2AJB2 108 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 Tcte2E9PY37 120 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 Omt2aF6ZJR3 104 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 Rbm3O89086 153 aaKnown RBP3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 Gm5153P01627 120 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 Rnase13Q5GAM7 153 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 CybaQ61462 192 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 NnatQ61979 81 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 Bles03Q8VD62 251 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 DynapQ9D7M5 161 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 Ndufa11Q9D8B4 141 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 1700012A03RikQ9DAF1 130 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 SnurfQ9WU12 71 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 Fam208bQ5DTT3 2382 aa3.71□□□□□ -1.81
Clk1-201ENSMUST00000034868 Ptpn13Q64512 2453 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 Igkv1-132A0A0B4J1H9 120 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 Igkv16-104A0A0B4J1I1 116 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 Igkv3-10A0A0G2JGN0 119 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 Igkv12-89A0A0G2JGW8 112 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 Klk12B2RVZ0 247 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 Gm6594J3QM43 95 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 Xcl1P47993 114 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 AmelxP63277 210 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 Defb4P82019 63 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 H1fxQ80ZM5 188 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 Gm9922Q8C3P1 144 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 Rpp25lQ99JH1 163 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 SNORCQ9CXL7 121 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 Rspo1Q9Z132 265 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 FcgbpE9Q0B5 2583 aa3.71□□□□□ -1.82
Clk1-201ENSMUST00000034868 Hivep2Q3UHF7 2430 aa3.7□□□□□ -1.82
Clk1-201ENSMUST00000034868 Cnot1Q6ZQ08 2375 aaKnown RBP3.7□□□□□ -1.82
Clk1-201ENSMUST00000034868 Megf8P60882 2789 aa3.7□□□□□ -1.82
Clk1-201ENSMUST00000034868 Gm12216A0A1W2P827 62 aa3.7□□□□□ -1.82
Clk1-201ENSMUST00000034868 Fgfbp3Q1HCM0 245 aa3.7□□□□□ -1.82
Clk1-201ENSMUST00000034868 Trav6d-4Q5R1I0 115 aa3.7□□□□□ -1.82
Clk1-201ENSMUST00000034868 Timm21Q8CCM6 249 aa3.7□□□□□ -1.82
Clk1-201ENSMUST00000034868 Rnase4Q9JJH1 148 aa3.7□□□□□ -1.82
Clk1-201ENSMUST00000034868 Phlda3Q9WV95 125 aa3.7□□□□□ -1.82
Clk1-201ENSMUST00000034868 RelnQ60841 3461 aa3.7□□□□□ -1.82
Clk1-201ENSMUST00000034868 Bahcc1Q3UHR0 2643 aa3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 F5O88783 2183 aa3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 Ighv5-12A0A075B5Q4 117 aa3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 Gm29423A0A087WRM1 55 aa3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 Psmg4P0C7N9 123 aa3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 FcorP0DJI6 106 aa3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 Rnase9P60154 184 aa3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 SelenowP63300 88 aa3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 GchfrP99025 84 aa3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 Defb36Q8K3U4 67 aa3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 UqcrqQ9CQ69 82 aa3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 Cacna1eQ61290 2272 aa3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 BptfA2A654 3036 aaKnown RBP3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 PkdrejQ9Z0T6 2126 aa3.69□□□□□ -1.82
Clk1-201ENSMUST00000034868 Igkv4-63A0A0G2JFU6 117 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Cisd3B1AR13 137 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 3110082J24RikF6Z6Z2 108 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Gm17577J3QNF7 156 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Gm933J3QPC1 141 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Fgf12P61329 243 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Gm12888Q3UW77 119 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Smim26Q3V460 107 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Rph3alQ768S4 302 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Ube2aQ9Z255 152 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 VcanQ62059 3357 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 CenpfE9Q3P4 2997 aaKnown RBP3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Notch2O35516 2470 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Vps13aQ5H8C4 3166 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Trav17A0A075B655 113 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 P01789 122 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Tnp2P11378 117 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 BlcapP62951 87 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Defb45Q3V490 66 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Defb19Q8K3I8 83 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 TncQ80YX1 2110 aa3.68□□□□□ -1.82
Clk1-201ENSMUST00000034868 Ints1Q6P4S8 2195 aa3.67□□□□□ -1.82
Clk1-201ENSMUST00000034868 Cep192E9Q4Y4 2514 aaKnown RBP3.67□□□□□ -1.82
Clk1-201ENSMUST00000034868 Igkv4-51A0N8I8 119 aa3.67□□□□□ -1.82
Clk1-201ENSMUST00000034868 Defa27F2Z403 93 aa3.67□□□□□ -1.82
Clk1-201ENSMUST00000034868 Ndufa1O35683 70 aa3.67□□□□□ -1.82
Clk1-201ENSMUST00000034868 Gm10767Q3TQP0 103 aa3.67□□□□□ -1.82
Clk1-201ENSMUST00000034868 Nabp2Q8R2Y9 212 aa3.67□□□□□ -1.82
Clk1-201ENSMUST00000034868 Rita1Q9D1H0 253 aa3.67□□□□□ -1.82
Clk1-201ENSMUST00000034868 Prok2Q9QXU7 128 aa3.67□□□□□ -1.82
Clk1-201ENSMUST00000034868 NipblQ6KCD5 2798 aaKnown RBP3.67□□□□□ -1.82
Clk1-201ENSMUST00000034868 Med12lQ8BQM9 2157 aa3.67□□□□□ -1.82
Clk1-201ENSMUST00000034868 RttnQ8R4Y8 2226 aa3.67□□□□□ -1.82
Clk1-201ENSMUST00000034868 Igkv17-127A0A0G2JDN5 117 aa3.66□□□□□ -1.82
Clk1-201ENSMUST00000034868 Igkv4-81A0A0G2JEY5 119 aa3.66□□□□□ -1.82
Clk1-201ENSMUST00000034868 E030025P04RikA2A6V5 185 aa3.66□□□□□ -1.82
Clk1-201ENSMUST00000034868 Cox6a1P43024 111 aa3.66□□□□□ -1.82
Clk1-201ENSMUST00000034868 TrioQ0KL02 3102 aa3.66□□□□□ -1.82
Clk1-201ENSMUST00000034868 Fam19a3Q7TPG6 132 aa3.66□□□□□ -1.82
Clk1-201ENSMUST00000034868 SptssaQ8R207 71 aa3.66□□□□□ -1.82
Clk1-201ENSMUST00000034868 Q8VC23 124 aa3.66□□□□□ -1.82
Clk1-201ENSMUST00000034868 Prr15Q9D1T5 122 aa3.66□□□□□ -1.82
Retrieved 100 of 22,080 RNA–protein pairs in 69.9 ms