RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Rpl35aO55142 110 aa3.56□□□□□ -1.84
Prkdc-201ENSMUST00000023352 P01745 121 aa3.56□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Tcl1b5P56845 121 aa3.56□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Wfdc11A2A5H7 82 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Spink1P09036 80 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Rpl18aP62717 176 aaKnown RBP3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 1700010B08RikQ9DAI7 102 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Smim10l1A0A087WNQ7 89 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Igkv4-74A0A0B4J1I3 119 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Igf1P05017 153 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Gm3618D3Z4P5 127 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Gm2916Q9D9B9 127 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Alms1Q8K4E0 3251 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ighv1-64A0A075B5X3 117 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Cd27P41272 250 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Apoc4Q61268 124 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ighv1-55A0A075B5W6 117 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Gm37389A0A0A6YW05 95 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Lst1O08843 95 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Cdpf1Q8R3A2 119 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 A0A1Y7VLU2 103 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ighv12-3A0A075B5T1 117 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ighv1-61P01749 117 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Gm4763Q8CFJ5 196 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ighv1-69A0A0G2JFS5 117 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Hoxb4P10284 250 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Synj2bpQ9D6K5 145 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Chchd5Q9CQP3 110 aa3.55□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ighv5-6A0A075B5Q0 117 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ighv1-53A0A075B5W3 117 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 P01728 117 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 UqcrqQ9CQ69 82 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Defb26Q30KN7 186 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ppp1r32Q148A4 427 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 ArtnQ9Z0L2 224 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ighv6-7A0A0A6YWU3 119 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Nsun4C4P6S0 806 aaKnown RBP3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Gm9970F6ZED4 185 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Gm17324Q8C6J8 137 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 P01790 122 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Smim1P0C8K7 78 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 P01748 117 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 P01820 115 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Spink10Q8CAC8 162 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Fgf6P21658 208 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 D930007J09RikQ9D2K6 131 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Igkv8-21A0A140T8P7 120 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 AmelxP63277 210 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ccl21aP84444 133 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ccl21bP86792 133 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ccl21cP86793 133 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 4933414I15RikQ9D4D5 133 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Msrb3Q8BU85 253 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 CstadQ9D245 104 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Nbeal1E9PYP2 2688 aa3.54□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Q08AU9 97 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 UtrnE9Q6R7 3430 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ighv1-50A0A075B5W1 117 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Gm12253Q5NC48 229 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Znf580Q9DB38 172 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Gm11020F6ZGD5 61 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ndufa4l2Q4FZG9 87 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Camk2n2Q78WH7 79 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Rnf152Q8BG47 203 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 H2al1aQ5M8Q2 105 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 4930415O20RikQ8CDT5 131 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Ube2e2Q91W82 201 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 P01787 123 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Fhl1P97447 280 aaKnown RBP3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 AW146154Q3TPQ7 468 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Trav7-6A0A075B640 112 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 P01658 132 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 P01659 112 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Atox1O08997 68 aaKnown RBP3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Lect2O88803 151 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Csdc2Q91YQ3 154 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Cysrt1Q9D1E4 142 aa3.53□□□□□ -1.84
Prkdc-201ENSMUST00000023352 Wfdc18P62810 74 aa3.53□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Odf1Q61999 247 aa3.53□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Crip3Q6Q6R3 243 aa3.53□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Chd8Q09XV5 2582 aaKnown RBP3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Igkv3-10A0A0G2JGN0 119 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Reg3gO09049 174 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Gp9O88186 177 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Ighv1-58A0A075B5W9 117 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Foxi2Q3I5G5 311 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Epg5Q80TA9 2572 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Gm5941Q497P9 117 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 4930470P17RikQ9D542 155 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Gm26558Q8BLW8 286 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Ighv1-74A0A0G2JGK2 117 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 AngP21570 145 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Klk9Q32M27 251 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 FshbQ60687 130 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Pfn2Q9JJV2 140 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Gm17455G3UW87 128 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Gm10577Q3UDV9 132 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Igkv6-13A0A0G2JGY3 119 aa3.52□□□□□ -1.85
Prkdc-201ENSMUST00000023352 Ighv1-5A0A0A6YWG2 117 aa3.51□□□□□ -1.85
Prkdc-201ENSMUST00000023352 P01789 122 aa3.51□□□□□ -1.85
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms