RNA–Protein interactions for RNA: ENSMUST00000180353.1

Sox1-201, Transcript of Transcription factor SOX-1, mousemouse

APPRIS P1 BASIC

Gene Sox1, Length 4,832 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1-201ENSMUST00000180353 Tmem254bP0DN90 123 aa16.57■□□□□ 0.24
Sox1-201ENSMUST00000180353 Tmem254cP0DN91 123 aa16.57■□□□□ 0.24
Sox1-201ENSMUST00000180353 Hoxb4P10284 250 aa16.57■□□□□ 0.24
Sox1-201ENSMUST00000180353 P18527 97 aa16.57■□□□□ 0.24
Sox1-201ENSMUST00000180353 BC048562Q80ZQ7 204 aa16.56■□□□□ 0.24
Sox1-201ENSMUST00000180353 Acyp1P56376 99 aa16.56■□□□□ 0.24
Sox1-201ENSMUST00000180353 Taf15Q8BQ46 557 aaKnown RBP16.56■□□□□ 0.24
Sox1-201ENSMUST00000180353 Usmg5Q78IK2 58 aa16.56■□□□□ 0.24
Sox1-201ENSMUST00000180353 Tet2Q4JK59 1912 aaKnown RBP16.55■□□□□ 0.24
Sox1-201ENSMUST00000180353 Tmem86bQ497J1 226 aa16.55■□□□□ 0.24
Sox1-201ENSMUST00000180353 HelzQ6DFV5 1964 aaKnown RBP16.54■□□□□ 0.24
Sox1-201ENSMUST00000180353 Ighv1-52A0A0A6YXC3 117 aa16.54■□□□□ 0.24
Sox1-201ENSMUST00000180353 Ang4Q3TMQ6 144 aa16.54■□□□□ 0.24
Sox1-201ENSMUST00000180353 Tomm7Q9D173 55 aa16.54■□□□□ 0.24
Sox1-201ENSMUST00000180353 P04943 107 aa16.54■□□□□ 0.24
Sox1-201ENSMUST00000180353 BikO70337 150 aa16.53■□□□□ 0.24
Sox1-201ENSMUST00000180353 Fam19a4Q7TPG5 135 aa16.53■□□□□ 0.24
Sox1-201ENSMUST00000180353 Gata1P17679 413 aa16.53■□□□□ 0.24
Sox1-201ENSMUST00000180353 Trav14d-3-dv8A0A075B619 120 aa16.52■□□□□ 0.23
Sox1-201ENSMUST00000180353 Lyzl4Q9D925 145 aa16.52■□□□□ 0.23
Sox1-201ENSMUST00000180353 Rnf114Q9ET26 229 aa16.52■□□□□ 0.23
Sox1-201ENSMUST00000180353 Notch3Q61982 2318 aa16.51■□□□□ 0.23
Sox1-201ENSMUST00000180353 Obox8V9GWY9 217 aa16.51■□□□□ 0.23
Sox1-201ENSMUST00000180353 Vpreb2P13373 142 aa16.51■□□□□ 0.23
Sox1-201ENSMUST00000180353 Cdip1Q9DB75 208 aa16.5■□□□□ 0.23
Sox1-201ENSMUST00000180353 Gm10337F7DEP7 55 aa16.5■□□□□ 0.23
Sox1-201ENSMUST00000180353 1500011B03RikQ3TTH7 73 aa16.5■□□□□ 0.23
Sox1-201ENSMUST00000180353 AgrnA2ASQ1 1950 aa16.49■□□□□ 0.23
Sox1-201ENSMUST00000180353 Mrps21P58059 87 aa16.49■□□□□ 0.23
Sox1-201ENSMUST00000180353 Col6a4A2AX52 2309 aa16.49■□□□□ 0.23
Sox1-201ENSMUST00000180353 Rnf185Q91YT2 192 aa16.49■□□□□ 0.23
Sox1-201ENSMUST00000180353 Med13lQ6JPI3 2207 aa16.48■□□□□ 0.23
Sox1-201ENSMUST00000180353 TroQ6DIC6 2087 aa16.48■□□□□ 0.23
Sox1-201ENSMUST00000180353 Cfap126Q6P8X9 189 aa16.48■□□□□ 0.23
Sox1-201ENSMUST00000180353 Tmem263Q9DAM7 115 aa16.48■□□□□ 0.23
Sox1-201ENSMUST00000180353 Psmb8P28063 276 aa16.47■□□□□ 0.23
Sox1-201ENSMUST00000180353 Ang3P97802 145 aa16.47■□□□□ 0.23
Sox1-201ENSMUST00000180353 Nbl1Q61477 178 aa16.47■□□□□ 0.23
Sox1-201ENSMUST00000180353 Igkv4-57-1A0A075B5M4 119 aa16.47■□□□□ 0.23
Sox1-201ENSMUST00000180353 Gm9949Q8C9F4 104 aa16.47■□□□□ 0.23
Sox1-201ENSMUST00000180353 Bub3Q9WVA3 326 aa16.47■□□□□ 0.23
Sox1-201ENSMUST00000180353 Col8a2P25318 699 aa16.46■□□□□ 0.23
Sox1-201ENSMUST00000180353 Pgpep1lQ9CWB5 130 aa16.46■□□□□ 0.23
Sox1-201ENSMUST00000180353 Serp2Q6TAW2 65 aa16.45■□□□□ 0.22
Sox1-201ENSMUST00000180353 A0A286YE02 88 aa16.45■□□□□ 0.22
Sox1-201ENSMUST00000180353 Q9D8Q6 235 aa16.45■□□□□ 0.22
Sox1-201ENSMUST00000180353 1700010B08RikQ9DAI7 102 aa16.45■□□□□ 0.22
Sox1-201ENSMUST00000180353 Igkv4-68A0A0B4J1I7 117 aa16.45■□□□□ 0.22
Sox1-201ENSMUST00000180353 Ighv1-64A0A075B5X3 117 aa16.44■□□□□ 0.22
Sox1-201ENSMUST00000180353 Naa38Q9D2U5 125 aa16.44■□□□□ 0.22
Sox1-201ENSMUST00000180353 E130218I03RikA0A0U1RNU5 63 aa16.44■□□□□ 0.22
Sox1-201ENSMUST00000180353 Znf672Q99LH4 468 aa16.44■□□□□ 0.22
Sox1-201ENSMUST00000180353 Wipf1Q8K1I7 493 aa16.43■□□□□ 0.22
Sox1-201ENSMUST00000180353 Spag11Q8K4N2 71 aa16.43■□□□□ 0.22
Sox1-201ENSMUST00000180353 Spink13Q3UTS8 97 aa16.43■□□□□ 0.22
Sox1-201ENSMUST00000180353 Fer1l4A3KGK3 1992 aa16.42■□□□□ 0.22
Sox1-201ENSMUST00000180353 Ighv1-74A0A0G2JGK2 117 aa16.42■□□□□ 0.22
Sox1-201ENSMUST00000180353 Tanc2A2A690 1994 aa16.42■□□□□ 0.22
Sox1-201ENSMUST00000180353 Ube2d3P61079 147 aa16.42■□□□□ 0.22
Sox1-201ENSMUST00000180353 Ube2d2P62838 147 aa16.42■□□□□ 0.22
Sox1-201ENSMUST00000180353 Znf239P24399 201 aa16.41■□□□□ 0.22
Sox1-201ENSMUST00000180353 Ube2d1P61080 147 aaKnown RBP16.41■□□□□ 0.22
Sox1-201ENSMUST00000180353 Csdc2Q91YQ3 154 aa16.41■□□□□ 0.22
Sox1-201ENSMUST00000180353 Rpl18aP62717 176 aaKnown RBP16.41■□□□□ 0.22
Sox1-201ENSMUST00000180353 Ighv1-50A0A075B5W1 117 aa16.4■□□□□ 0.22
Sox1-201ENSMUST00000180353 AvpP35455 168 aa16.4■□□□□ 0.22
Sox1-201ENSMUST00000180353 Gm5629P06327 117 aa16.4■□□□□ 0.22
Sox1-201ENSMUST00000180353 Gm10192Q3V0S1 108 aa16.4■□□□□ 0.22
Sox1-201ENSMUST00000180353 CstadQ9D245 104 aa16.4■□□□□ 0.22
Sox1-201ENSMUST00000180353 Gm19935A0A1B0GSF9 52 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 OdaphJ3QNT8 126 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 Trav13d-1A0A075B606 110 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 Gm3618D3Z4P5 127 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 Gm2916Q9D9B9 127 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 Cox17P56394 63 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 Smr3aQ61900 147 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 9230109A22RikQ8BHE6 111 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 A830031A19RikQ8BNT5 113 aa16.39■□□□□ 0.21
Sox1-201ENSMUST00000180353 Nav2E9Q842 2432 aa16.38■□□□□ 0.21
Sox1-201ENSMUST00000180353 Ormdl1Q921I0 153 aa16.38■□□□□ 0.21
Sox1-201ENSMUST00000180353 Ighv12-3A0A075B5T1 117 aa16.38■□□□□ 0.21
Sox1-201ENSMUST00000180353 Spata25Q9DA57 226 aa16.38■□□□□ 0.21
Sox1-201ENSMUST00000180353 P04219 140 aa16.37■□□□□ 0.21
Sox1-201ENSMUST00000180353 Eml6Q5SQM0 1958 aa16.37■□□□□ 0.21
Sox1-201ENSMUST00000180353 P01750 117 aa16.37■□□□□ 0.21
Sox1-201ENSMUST00000180353 Trav13n-1A0A0G2JEU8 110 aa16.36■□□□□ 0.21
Sox1-201ENSMUST00000180353 Gm12689Q8BQU9 117 aa16.36■□□□□ 0.21
Sox1-201ENSMUST00000180353 Trbv16A0A0B4J1H3 115 aa16.36■□□□□ 0.21
Sox1-201ENSMUST00000180353 C1qcQ02105 246 aa16.36■□□□□ 0.21
Sox1-201ENSMUST00000180353 P01748 117 aa16.36■□□□□ 0.21
Sox1-201ENSMUST00000180353 Igkv1-35A0A0G2JDE5 120 aa16.35■□□□□ 0.21
Sox1-201ENSMUST00000180353 Ighv3-4A0A0A6YXF1 117 aa16.35■□□□□ 0.21
Sox1-201ENSMUST00000180353 P01725 110 aa16.35■□□□□ 0.21
Sox1-201ENSMUST00000180353 Gm15217A2CG07 155 aa16.34■□□□□ 0.21
Sox1-201ENSMUST00000180353 Msrb2Q78J03 175 aa16.34■□□□□ 0.21
Sox1-201ENSMUST00000180353 Lyrm9Q3UN90 78 aa16.33■□□□□ 0.2
Sox1-201ENSMUST00000180353 Ndufc1Q9CQY9 76 aa16.33■□□□□ 0.2
Sox1-201ENSMUST00000180353 Dido1Q8C9B9 2256 aaKnown RBP16.33■□□□□ 0.2
Sox1-201ENSMUST00000180353 Igkv4-61A0A0G2JH00 117 aa16.33■□□□□ 0.2
Sox1-201ENSMUST00000180353 Gm815Q3UWS2 115 aa16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 112.7 ms