RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Ighv8-2A0A0A6YW58 119 aa7.39□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Tmem210Q9D2F0 147 aa7.39□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Ormdl1Q921I0 153 aa7.38□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Trav6n-6A0A075B6B2 114 aa7.38□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Fgf6P21658 208 aa7.38□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Trav12-3A0A075B648 115 aa7.38□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Wnk1P83741 2377 aa7.38□□□□□ -1.23
Col6a5-201ENSMUST00000165165 P01658 132 aa7.38□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Cox7cP17665 63 aa7.38□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Gm12253Q5NC48 229 aa7.38□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Ly6c1P0CW02 131 aa7.38□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Atp6v0e2Q91XE7 81 aa7.38□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Igkv1-117A0A140T8M0 119 aa7.37□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Gm28539A0A087WSL9 92 aa7.37□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Erdr1J3QMM0 206 aa7.37□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Ighv1-4A0A075B5T4 117 aa7.37□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Tfpi2O35536 230 aa7.37□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Camk2n2Q78WH7 79 aa7.37□□□□□ -1.23
Col6a5-201ENSMUST00000165165 9430069I07RikQ9CX21 111 aa7.37□□□□□ -1.23
Col6a5-201ENSMUST00000165165 CenpwQ3URR0 86 aa7.37□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Cep290Q6A078 2472 aa7.37□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Trav13n-2A0A0G2JF93 110 aa7.37□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Ccdc179J3QM76 67 aa7.37□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Rnf152Q8BG47 203 aa7.37□□□□□ -1.23
Col6a5-201ENSMUST00000165165 NpbQ8K4P1 119 aa7.37□□□□□ -1.23
Col6a5-201ENSMUST00000165165 P01745 121 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Igf1P05017 153 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Trav13d-4A0A0G2JFX3 110 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Hoxb4P10284 250 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Mrpl35Q9CQL6 188 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Rpl39lQ9CQD0 51 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Serp1Q9Z1W5 66 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Ighv1-76A0A0G2JFE9 117 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Grem1O70326 184 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Them7Q9DCP4 223 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 OdaphJ3QNT8 126 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Gm26602M0QWA4 95 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Gm10384Q3UQ87 92 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Pom121l2Q5SW25 972 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Obox8V9GWY9 217 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 P18528 98 aa7.36□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Gm17521F6QAC8 156 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 P01638 115 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Ndufc1Q9CQY9 76 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Ighv1-50A0A075B5W1 117 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Gm12689Q8BQU9 117 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Igkv8-30A0A140T8M3 121 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 P01660 111 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Iglc1A0A0G2JE99 106 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Ighv1-74A0A0G2JGK2 117 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 P01843 105 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Igkv3-7A0A0G2JE31 119 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Gm44973A0A140LJJ1 189 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Tcl1b3P56842 122 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Q80X32 188 aaKnown RBP7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Rhno1Q8K3A4 235 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Tm2d1Q99MB3 208 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Gm20878L7N244 103 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 P01655 112 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Cfap126Q6P8X9 189 aa7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Ncor2Q9WU42 2472 aaKnown RBP7.35□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Pde6gP09174 87 aa7.34□□□□□ -1.23
Col6a5-201ENSMUST00000165165 1700084M14RikB1AT01 78 aa7.34□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Fancd2osQ9D4K4 178 aa7.34□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Pmaip1Q9JM54 103 aa7.34□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Cox7bP56393 80 aa7.34□□□□□ -1.23
Col6a5-201ENSMUST00000165165 EpopQ7TNS8 369 aa7.34□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Gm9961Q8BNV2 113 aa7.34□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Trav9n-4A0A075B631 113 aa7.34□□□□□ -1.23
Col6a5-201ENSMUST00000165165 A0A1L1SR50 188 aa7.34□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Reg3bP35230 175 aa7.34□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Col5a3Q9JLI2 1739 aa7.34□□□□□ -1.23
Col6a5-201ENSMUST00000165165 Inafm1E9PV59 130 aa7.34□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Tmem213Q08EA8 116 aa7.34□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Wdr90Q6ZPG2 1874 aa7.33□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Ighv1-64A0A075B5X3 117 aa7.33□□□□□ -1.24
Col6a5-201ENSMUST00000165165 P04946 108 aa7.33□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Cdpf1Q8R3A2 119 aa7.33□□□□□ -1.24
Col6a5-201ENSMUST00000165165 C920008G01RikA0A0B4J1N1 112 aa7.33□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Gata3P23772 443 aa7.33□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Tcl1b2P56841 117 aa7.33□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Trbv14A0A140T8L9 115 aa7.33□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Trav13-2A0A075B649 110 aa7.33□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Trav13n-1A0A0G2JEU8 110 aa7.33□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Gm17677B3GLJ5 116 aa7.33□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Edn3P48299 214 aa7.32□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Lypd6Q8BPP5 171 aa7.32□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Psmb8P28063 276 aa7.32□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Gphb5Q812B2 130 aa7.32□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Fam19a1Q7TPG8 133 aa7.32□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Esm1Q9QYY7 184 aa7.32□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Nxph4G3X9N5 304 aa7.32□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Fhl4Q8CDC8 279 aa7.32□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Gtsf1Q9DAN6 167 aa7.32□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Atox1O08997 68 aaKnown RBP7.31□□□□□ -1.24
Col6a5-201ENSMUST00000165165 B230359F08RikA0A0B4J1K3 109 aa7.31□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Fxyd1Q9Z239 92 aa7.31□□□□□ -1.24
Col6a5-201ENSMUST00000165165 4930470P17RikQ9D542 155 aa7.31□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Trav13d-1A0A075B606 110 aa7.31□□□□□ -1.24
Col6a5-201ENSMUST00000165165 Trav13-1A0A075B644 110 aa7.3□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 84.6 ms