RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Odf3Q920N1 254 aa5.7□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ndufa1O35683 70 aa5.69□□□□□ -1.5
Bdnf-207ENSMUST00000111047 P01812 117 aa5.69□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Spink13Q3UTS8 97 aa5.69□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Csdc2Q91YQ3 154 aa5.69□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Higd1aQ9JLR9 95 aa5.69□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ighv1-58A0A075B5W9 117 aa5.69□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Tcte2E9PY37 120 aa5.69□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Socs3O35718 225 aa5.69□□□□□ -1.5
Bdnf-207ENSMUST00000111047 BC106179Q8C9L1 186 aa5.69□□□□□ -1.5
Bdnf-207ENSMUST00000111047 SpenQ62504 3644 aaKnown RBP5.69□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Fgf6P21658 208 aa5.69□□□□□ -1.5
Bdnf-207ENSMUST00000111047 4930596D02RikQ3V0H9 216 aa5.69□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Usp9xP70398 2559 aaKnown RBP5.69□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Nat8b-psE0CYC6 232 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 PolP10400 120 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Cox7cP17665 63 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Atp5lQ9CPQ8 103 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Vps13cQ8BX70 3748 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ighv1-12A0A0A6YXJ9 117 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 MdfiP70331 251 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 FshbQ60687 130 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Sprr3O09116 238 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 TshbP12656 138 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Edn2P22389 175 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Foxi1Q922I5 372 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Tac4Q99N14 128 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ccl24Q9JKC0 119 aa5.68□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Trbv13-1A0A0B4J1P8 112 aa5.67□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm10553J3QPF1 123 aa5.67□□□□□ -1.5
Bdnf-207ENSMUST00000111047 TtrP07309 147 aa5.67□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ifitm10Q8BR26 201 aa5.67□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Chd8Q09XV5 2582 aaKnown RBP5.67□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Igkv2-137A0A0B4J1H6 120 aa5.67□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Cfc1P97766 202 aa5.67□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Dpm2Q9Z324 84 aa5.67□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm20499D3Z4G5 72 aa5.67□□□□□ -1.5
Bdnf-207ENSMUST00000111047 SmcpP15265 143 aa5.67□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Srp14P16254 110 aaKnown RBP5.67□□□□□ -1.5
Bdnf-207ENSMUST00000111047 GalmQ8K157 342 aa5.67□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ighv1-75A0A075B5Y2 117 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 1520401A03RikA0A0J9YVH6 598 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Egr2P08152 470 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Defa2P28309 93 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ndufb4Q9CQC7 129 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Itpr1P11881 2749 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Abca2P41234 2434 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Igkv4-74A0A0B4J1I3 119 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm35549A0A0N4SUS7 141 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 P01747 120 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 P06328 117 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm16223Q8CBM3 117 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ighv1-52A0A0A6YXC3 117 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 NrgnP60761 78 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Smrp1Q2MH31 260 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Samd5Q3V1H9 173 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Dmrt3Q80WT2 476 aa5.66□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Igkv4-70A0A0B4J1I5 116 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Igkv4-71A0A0G2JEH0 117 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Esp24A8R0V6 68 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm21994F6T2D2 329 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gm933J3QPC1 141 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 P18527 97 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 1500011B03RikQ3TTH7 73 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Klhdc1Q80YG3 406 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Rab37Q9JKM7 223 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Nav3Q80TN7 2359 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ccl25O35903 144 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ccl19O70460 108 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 P01837 106 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 P01843 105 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Odf1Q61999 247 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Spag11Q8K4N2 71 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Gemin7Q9CWY4 129 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Klk5Q9D140 293 aa5.65□□□□□ -1.5
Bdnf-207ENSMUST00000111047 Ighv12-3A0A075B5T1 117 aa5.65□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Rpl39P62892 51 aa5.65□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Fam222aQ6PGH4 453 aa5.65□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Wnk1P83741 2377 aa5.65□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Gm5629P06327 117 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Prr9Q8BV84 116 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Spink12Q9D256 87 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Zzef1Q5SSH7 2924 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Gm884A2A9H6 3643 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Krtap28-13A0A087WQP5 138 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Gm9925F6T2U3 160 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Q9DAB9 146 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Trav4n-4A0A075B615 110 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Taf15Q8BQ46 557 aaKnown RBP5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Igkv4-91A0A075B5L2 119 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Ighv3-3A0A0A6YWL2 116 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Gm17455G3UW87 128 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 P01811 117 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Pla2g2aP31482 146 aa5.64□□□□□ -1.51
Bdnf-207ENSMUST00000111047 DspE9Q557 2883 aaKnown RBP5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Abca12E9Q876 2595 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Trbv16A0A0B4J1H3 115 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Gm26661M0QWV4 156 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Foxi2Q3I5G5 311 aa5.63□□□□□ -1.51
Bdnf-207ENSMUST00000111047 Lyzl4Q9D925 145 aa5.63□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 91.7 ms