RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Gm21994F6T2D2 329 aa13.73□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Hoxd3P09027 433 aa13.73□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Cryba4Q9JJV0 196 aa13.73□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Akap6E9Q9K8 2307 aa13.73□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Tmem258P61166 79 aa13.73□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Fam19a4Q7TPG5 135 aa13.72□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Jmjd1cQ69ZK6 2350 aa13.72□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Eif4ebp1Q60876 117 aa13.72□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Chchd5Q9CQP3 110 aa13.72□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Znf672Q99LH4 468 aa13.72□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 PpdpfQ9CR37 115 aa13.72□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Mrpl35Q9CQL6 188 aa13.71□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Wfdc15bQ9JHY4 80 aa13.71□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Ighv1-75A0A075B5Y2 117 aa13.71□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Igkv4-72A0A0B4J1I4 117 aa13.71□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 P01659 112 aa13.71□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 PkdrejQ9Z0T6 2126 aa13.71□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Trav9-2A0A075B647 113 aa13.71□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Trav9-4A0A0B4J1K2 113 aa13.71□□□□□ -0.21
Col4a3bp-202ENSMUST00000109444 Rpl39P62892 51 aa13.71□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Nop10Q9CQS2 64 aa13.7□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Plxnb1Q8CJH3 2119 aa13.7□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Gm17359A0A0G2JEB7 487 aa13.7□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 P01643 108 aa13.7□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Spink10Q8CAC8 162 aa13.7□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Trav11A0A0B4J1J9 114 aa13.7□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Gm15557A6PWY0 234 aa13.69□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Cfap126Q6P8X9 189 aa13.69□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Sptbn1Q62261 2363 aaKnown RBP13.69□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Ighv1-11A0A0A6YWI9 117 aa13.69□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Ccl21aP84444 133 aa13.69□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Ccl21bP86792 133 aa13.69□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Ccl21cP86793 133 aa13.69□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Lypd6Q8BPP5 171 aa13.69□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 TncQ80YX1 2110 aa13.69□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Qrich2A0A140LIY9 2337 aa13.68□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Q9CX25 107 aa13.68□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Gm10553J3QPF1 123 aa13.67□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 AngP21570 145 aa13.67□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 1110002E22RikE0CYV9 1786 aa13.67□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 HelzQ6DFV5 1964 aaKnown RBP13.67□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Igkv4-69A0A0B4J1I6 116 aa13.67□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Gm17455G3UW87 128 aa13.67□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Map6d1Q14BB9 191 aa13.67□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Ptprz1B9EKR1 2312 aa13.67□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Zfp951A0A087WRH0 451 aa13.66□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Q9D131 166 aa13.66□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Trav9n-2A0A0G2JDP3 113 aa13.66□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Gm42674D3YUT9 64 aa13.66□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Tmem223Q9CQE2 199 aaKnown RBP13.66□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Trbv13-1A0A0B4J1P8 112 aa13.65□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Ndufs7Q9DC70 224 aa13.65□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Pcnx1Q9QYC1 2344 aa13.65□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Fxyd5P97808 178 aa13.65□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Igkv4-79A0A075B5L8 119 aa13.65□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Mapk1ip1lQ8BH93 242 aa13.65□□□□□ -0.22
Col4a3bp-202ENSMUST00000109444 Igkv4-78A0A0A6YYE5 119 aa13.64□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Med12A2AGH6 2190 aa13.64□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Gm4861Q8C5A4 106 aa13.64□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Trav7-6A0A075B640 112 aa13.63□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 OdaphJ3QNT8 126 aa13.63□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Cnot1Q6ZQ08 2375 aaKnown RBP13.63□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Tet2Q4JK59 1912 aaKnown RBP13.63□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Igkv4-57A0A0A6YYE7 117 aa13.63□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 BlcapP62951 87 aa13.63□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 BC107364E9Q5A2 140 aa13.62□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 AtrxQ61687 2476 aaKnown RBP13.62□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Rbm3O89086 153 aaKnown RBP13.62□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Gm14137Q8CE97 175 aa13.62□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Col6a6Q8C6K9 2265 aa13.62□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Gata3P23772 443 aa13.62□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Trav9d-3A0A075B695 113 aa13.62□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Prr12E9PYL2 2035 aaKnown RBP13.61□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Ighv2-7A0A075B5Q8 116 aa13.61□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Armcx4E9PWM3 2356 aa13.61□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Znf239P24399 201 aa13.61□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 P06328 117 aa13.61□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Pde6gP09174 87 aa13.61□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Fgf6P21658 208 aa13.61□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Rbx1P62878 108 aa13.61□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Tcf20Q9EPQ8 1987 aa13.6□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Ang3P97802 145 aa13.6□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Heatr5aQ5PRF0 2038 aa13.6□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Cep250Q60952 2414 aa13.6□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Pla2g2dQ9WVF6 144 aa13.6□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Ighv1-82A0A0G2JEU7 117 aa13.59□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Ighv1-61P01749 117 aa13.59□□□□□ -0.23
Col4a3bp-202ENSMUST00000109444 Usf3B2RUQ2 2221 aa13.58□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Gm44965A0A0N4SVR3 59 aa13.58□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Tmem254aP0DN89 123 aa13.58□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Tmem254bP0DN90 123 aa13.58□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Tmem254cP0DN91 123 aa13.58□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Cfc1P97766 202 aa13.58□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Gm7257D3YX25 99 aa13.57□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 1810032O08RikE9PZV8 113 aa13.57□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Gm20726G3UX18 150 aa13.57□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Triap1Q9D8Z2 76 aa13.57□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Sslp1Q3UN54 99 aa13.57□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Gm6899Q3USS0 134 aa13.56□□□□□ -0.24
Col4a3bp-202ENSMUST00000109444 Abca1P41233 2261 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms