RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Ubald2Q8BQH4 164 aa12.53□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Igkv4-62A0A0G2JDW9 117 aa12.53□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Ros1Q78DX7 2340 aa12.53□□□□□ -0.4
Ctcf-201ENSMUST00000005841 P01739 132 aa12.53□□□□□ -0.4
Ctcf-201ENSMUST00000005841 1500011B03RikQ3TTH7 73 aa12.53□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Ighv1-12A0A0A6YXJ9 117 aa12.52□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Gm9887F6RFI0 207 aa12.52□□□□□ -0.4
Ctcf-201ENSMUST00000005841 FcorP0DJI6 106 aa12.52□□□□□ -0.4
Ctcf-201ENSMUST00000005841 1700067P10RikG3X8U2 183 aa12.52□□□□□ -0.41
Ctcf-201ENSMUST00000005841 P01724 129 aa12.52□□□□□ -0.41
Ctcf-201ENSMUST00000005841 P01727 129 aa12.52□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Cep250Q60952 2414 aa12.52□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Defb20Q30KP3 96 aa12.52□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Ighv1-85A0A075B5Y6 117 aa12.51□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Pglyrp1O88593 182 aa12.51□□□□□ -0.41
Ctcf-201ENSMUST00000005841 F11rO88792 300 aa12.51□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Defb30Q30KN4 75 aa12.51□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Ubr5Q80TP3 2792 aa12.51□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Ighv1-52A0A0A6YXC3 117 aa12.51□□□□□ -0.41
Ctcf-201ENSMUST00000005841 LeprotO89013 131 aa12.51□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Edn3P48299 214 aa12.51□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Atp5lQ9CPQ8 103 aa12.51□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Mfap4Q9D1H9 257 aa12.51□□□□□ -0.41
Ctcf-201ENSMUST00000005841 P01820 115 aa12.51□□□□□ -0.41
Ctcf-201ENSMUST00000005841 CenpwQ3URR0 86 aa12.51□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Tmem263Q9DAM7 115 aa12.5□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Gm9922Q8C3P1 144 aa12.5□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Gm3285A0A1W2P7U0 201 aa12.5□□□□□ -0.41
Ctcf-201ENSMUST00000005841 3110070M22RikQ9DAQ7 118 aa12.49□□□□□ -0.41
Ctcf-201ENSMUST00000005841 TgfaP48030 159 aa12.49□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Mrpl35Q9CQL6 188 aa12.49□□□□□ -0.41
Ctcf-201ENSMUST00000005841 SbsponQ3UPR9 264 aa12.49□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Wdr38Q9D994 303 aa12.49□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Gm10251J3QPM5 127 aa12.48□□□□□ -0.41
Ctcf-201ENSMUST00000005841 S100a4P07091 101 aa12.48□□□□□ -0.41
Ctcf-201ENSMUST00000005841 C1qcQ02105 246 aa12.48□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Ighv1-63A0A075B5X2 117 aa12.48□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Trbv16A0A0B4J1H3 115 aa12.48□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Rpl32-psP17932 135 aa12.48□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Spink6Q8BT20 105 aa12.47□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Iah1Q9DB29 249 aa12.47□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Gm867A0A1W2P7T4 151 aa12.47□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Krtap27-1E9PX37 202 aa12.47□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Bri3P28662 125 aa12.47□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Gm9936Q8C864 160 aa12.47□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Mpv17l2Q8VIK2 200 aa12.47□□□□□ -0.41
Ctcf-201ENSMUST00000005841 4930442H23RikQ9D5G7 103 aa12.47□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Gm17727E9Q4V7 109 aa12.46□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Ube2e1P52482 193 aa12.46□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Atp5g3P56384 141 aa12.46□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Defb47Q30KN1 79 aa12.46□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Msrb2Q78J03 175 aa12.46□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Esp24A8R0V6 68 aa12.46□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Rasl11bQ922H7 247 aa12.46□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Rab37Q9JKM7 223 aa12.46□□□□□ -0.41
Ctcf-201ENSMUST00000005841 Eif4ebp1Q60876 117 aa12.46□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Gm6793B2RXM2 351 aa12.45□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Gm933J3QPC1 141 aa12.45□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Mettl26Q9DCS2 204 aa12.45□□□□□ -0.42
Ctcf-201ENSMUST00000005841 P01750 117 aa12.45□□□□□ -0.42
Ctcf-201ENSMUST00000005841 1700020N15RikL7MTX3 112 aa12.45□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Pla2g2aP31482 146 aa12.45□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Zc2hc1bQ9D534 172 aa12.45□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Ighv2-6-8A0A0A6YWY9 116 aa12.44□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Q4KKZ1 196 aa12.44□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Gm904Q3V2L5 102 aa12.43□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Eif4ebp3Q80VV3 101 aa12.43□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Fgf23Q9EPC2 251 aa12.43□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Dopey2Q3UHQ6 2295 aa12.43□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Cnot1Q6ZQ08 2375 aaKnown RBP12.43□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Smim20D3Z7Q2 69 aa12.43□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Ndufb4Q9CQC7 129 aa12.43□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Gm20499D3Z4G5 72 aa12.42□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Cfap126Q6P8X9 189 aa12.42□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Lect2O88803 151 aa12.41□□□□□ -0.42
Ctcf-201ENSMUST00000005841 March3Q8BRX9 218 aa12.4□□□□□ -0.42
Ctcf-201ENSMUST00000005841 Ighv1-72P01751 139 aa12.4□□□□□ -0.43
Ctcf-201ENSMUST00000005841 H1fxQ80ZM5 188 aa12.4□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Arl3Q9WUL7 182 aa12.4□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Ighv1-50A0A075B5W1 117 aa12.39□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Apoc4Q61268 124 aa12.39□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Wfdc15aQ8BH89 80 aa12.39□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Klk7Q91VE3 249 aa12.39□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Cd164l2Q9D6W7 172 aa12.39□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Spint3Q3UW09 88 aa12.39□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Trav7d-3Q5R1I1 112 aa12.39□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Esm1Q9QYY7 184 aa12.39□□□□□ -0.43
Ctcf-201ENSMUST00000005841 AcacaQ5SWU9 2345 aa12.38□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Rbmy1bQ60990 380 aa12.38□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Morn3Q8C5T4 241 aa12.38□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Gm15557A6PWY0 234 aa12.38□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Gm9970F6ZED4 185 aa12.38□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Xlr5cQ9JJR2 179 aa12.38□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Timm17bQ9Z0V7 172 aa12.38□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Trav4d-3A0A075B625 110 aa12.37□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Ube2wQ8VDW4 151 aa12.37□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Fam208bQ5DTT3 2382 aa12.37□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Ash1lQ99MY8 2958 aa12.37□□□□□ -0.43
Ctcf-201ENSMUST00000005841 Sptbn1Q62261 2363 aaKnown RBP12.37□□□□□ -0.43
Ctcf-201ENSMUST00000005841 SetxA2AKX3 2646 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms