RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Ang3P97802 145 aa11.6□□□□□ -0.55
Vcan-201ENSMUST00000109543 Ube2e2Q91W82 201 aa11.6□□□□□ -0.55
Vcan-201ENSMUST00000109543 Muc4Q8JZM8 3443 aa11.6□□□□□ -0.55
Vcan-201ENSMUST00000109543 Trav9-2A0A075B647 113 aa11.6□□□□□ -0.55
Vcan-201ENSMUST00000109543 Trav9-4A0A0B4J1K2 113 aa11.6□□□□□ -0.55
Vcan-201ENSMUST00000109543 Umad1E0CX23 159 aa11.6□□□□□ -0.55
Vcan-201ENSMUST00000109543 Gpx1P11352 201 aa11.6□□□□□ -0.55
Vcan-201ENSMUST00000109543 Sdhaf1Q3U276 118 aa11.6□□□□□ -0.55
Vcan-201ENSMUST00000109543 Muc2Q80Z19 2680 aa11.59□□□□□ -0.55
Vcan-201ENSMUST00000109543 Ly6g5bQ8K1T4 194 aa11.59□□□□□ -0.55
Vcan-201ENSMUST00000109543 Gnb1lQ9EQ15 326 aa11.59□□□□□ -0.55
Vcan-201ENSMUST00000109543 Tep1P97499 2629 aa11.59□□□□□ -0.55
Vcan-201ENSMUST00000109543 Zfyve26Q5DU37 2529 aa11.59□□□□□ -0.55
Vcan-201ENSMUST00000109543 Ighv12-3A0A075B5T1 117 aa11.59□□□□□ -0.55
Vcan-201ENSMUST00000109543 A930009A15RikG3UYI6 118 aa11.59□□□□□ -0.55
Vcan-201ENSMUST00000109543 Thy1P01831 162 aa11.59□□□□□ -0.55
Vcan-201ENSMUST00000109543 Clec4b2Q67DU8 208 aa11.59□□□□□ -0.55
Vcan-201ENSMUST00000109543 Cphx2Q8BX39 182 aa11.59□□□□□ -0.55
Vcan-201ENSMUST00000109543 Celsr2Q9R0M0 2920 aa11.59□□□□□ -0.55
Vcan-201ENSMUST00000109543 BC107364E9Q5A2 140 aa11.58□□□□□ -0.56
Vcan-201ENSMUST00000109543 Gm10775Q3V290 127 aa11.58□□□□□ -0.56
Vcan-201ENSMUST00000109543 Ormdl2Q9CQZ0 153 aa11.58□□□□□ -0.56
Vcan-201ENSMUST00000109543 Spcs1Q9D958 161 aa11.58□□□□□ -0.56
Vcan-201ENSMUST00000109543 Josd1Q9DBJ6 202 aa11.58□□□□□ -0.56
Vcan-201ENSMUST00000109543 Usp9xP70398 2559 aaKnown RBP11.58□□□□□ -0.56
Vcan-201ENSMUST00000109543 Fxyd7P59648 80 aa11.58□□□□□ -0.56
Vcan-201ENSMUST00000109543 Foxi1Q922I5 372 aa11.58□□□□□ -0.56
Vcan-201ENSMUST00000109543 Ube2v1Q9CZY3 147 aa11.58□□□□□ -0.56
Vcan-201ENSMUST00000109543 Gm16442D3YZG3 307 aa11.57□□□□□ -0.56
Vcan-201ENSMUST00000109543 Gm17430F6RSK3 157 aa11.57□□□□□ -0.56
Vcan-201ENSMUST00000109543 Gm10271F6WY25 52 aa11.57□□□□□ -0.56
Vcan-201ENSMUST00000109543 Cd69P37217 199 aa11.57□□□□□ -0.56
Vcan-201ENSMUST00000109543 C1qcQ02105 246 aa11.57□□□□□ -0.56
Vcan-201ENSMUST00000109543 Iah1Q9DB29 249 aa11.57□□□□□ -0.56
Vcan-201ENSMUST00000109543 Bahcc1Q3UHR0 2643 aa11.57□□□□□ -0.56
Vcan-201ENSMUST00000109543 Gm5089A1L3C8 106 aa11.57□□□□□ -0.56
Vcan-201ENSMUST00000109543 Olfr313Q5NC55 308 aa11.57□□□□□ -0.56
Vcan-201ENSMUST00000109543 Trbv13-1A0A0B4J1P8 112 aa11.56□□□□□ -0.56
Vcan-201ENSMUST00000109543 1810032O08RikE9PZV8 113 aa11.56□□□□□ -0.56
Vcan-201ENSMUST00000109543 BtcQ05928 177 aa11.56□□□□□ -0.56
Vcan-201ENSMUST00000109543 Fam216aQ9DB54 251 aa11.56□□□□□ -0.56
Vcan-201ENSMUST00000109543 CtrlQ9ER05 264 aa11.56□□□□□ -0.56
Vcan-201ENSMUST00000109543 Ankrd11E9Q4F7 2643 aa11.55□□□□□ -0.56
Vcan-201ENSMUST00000109543 Ighv1-63A0A075B5X2 117 aa11.55□□□□□ -0.56
Vcan-201ENSMUST00000109543 Ighv1-66A0A075B5X5 117 aa11.55□□□□□ -0.56
Vcan-201ENSMUST00000109543 Hoxd3P09027 433 aa11.55□□□□□ -0.56
Vcan-201ENSMUST00000109543 Gcn1E9PVA8 2671 aaKnown RBP11.55□□□□□ -0.56
Vcan-201ENSMUST00000109543 Gm29666A0A087WQ99 126 aa11.55□□□□□ -0.56
Vcan-201ENSMUST00000109543 1500011B03RikQ3TTH7 73 aa11.55□□□□□ -0.56
Vcan-201ENSMUST00000109543 Clec5aQ9R007 190 aa11.55□□□□□ -0.56
Vcan-201ENSMUST00000109543 LrbaQ9ESE1 2856 aa11.55□□□□□ -0.56
Vcan-201ENSMUST00000109543 Gm5629P06327 117 aa11.54□□□□□ -0.56
Vcan-201ENSMUST00000109543 G0s2Q61585 103 aa11.54□□□□□ -0.56
Vcan-201ENSMUST00000109543 Chac1Q8R3J5 223 aa11.54□□□□□ -0.56
Vcan-201ENSMUST00000109543 PmvkQ9D1G2 192 aa11.54□□□□□ -0.56
Vcan-201ENSMUST00000109543 Tex48Q9DA81 110 aa11.54□□□□□ -0.56
Vcan-201ENSMUST00000109543 Sec11aQ9R0P6 179 aa11.54□□□□□ -0.56
Vcan-201ENSMUST00000109543 ColqO35348 457 aa11.54□□□□□ -0.56
Vcan-201ENSMUST00000109543 Spink10Q8CAC8 162 aa11.54□□□□□ -0.56
Vcan-201ENSMUST00000109543 Lgals6O54891 301 aa11.53□□□□□ -0.56
Vcan-201ENSMUST00000109543 Fhl2O70433 279 aa11.53□□□□□ -0.56
Vcan-201ENSMUST00000109543 Vmn1r197Q8R265 298 aa11.53□□□□□ -0.56
Vcan-201ENSMUST00000109543 Ighv5-9-1A0A0A6YVS4 126 aa11.53□□□□□ -0.56
Vcan-201ENSMUST00000109543 Gm20499D3Z4G5 72 aa11.53□□□□□ -0.56
Vcan-201ENSMUST00000109543 Smim13E9Q942 88 aa11.53□□□□□ -0.56
Vcan-201ENSMUST00000109543 P18527 97 aa11.53□□□□□ -0.56
Vcan-201ENSMUST00000109543 Cdpf1Q8R3A2 119 aa11.53□□□□□ -0.56
Vcan-201ENSMUST00000109543 4930564D02RikQ9D4S4 103 aa11.53□□□□□ -0.56
Vcan-201ENSMUST00000109543 Akap6E9Q9K8 2307 aa11.53□□□□□ -0.56
Vcan-201ENSMUST00000109543 Ly86O88188 162 aa11.52□□□□□ -0.57
Vcan-201ENSMUST00000109543 Mc5rP41149 325 aa11.52□□□□□ -0.57
Vcan-201ENSMUST00000109543 AI854703Q8BIN3 203 aa11.52□□□□□ -0.57
Vcan-201ENSMUST00000109543 Cotl1Q9CQI6 142 aa11.52□□□□□ -0.57
Vcan-201ENSMUST00000109543 Trbv16A0A0B4J1H3 115 aa11.52□□□□□ -0.57
Vcan-201ENSMUST00000109543 Gm17732E9Q5I2 61 aa11.52□□□□□ -0.57
Vcan-201ENSMUST00000109543 Egr2P08152 470 aa11.52□□□□□ -0.57
Vcan-201ENSMUST00000109543 Fgf6P21658 208 aa11.52□□□□□ -0.57
Vcan-201ENSMUST00000109543 Defa9P50707 93 aa11.52□□□□□ -0.57
Vcan-201ENSMUST00000109543 Defb2P82020 71 aa11.52□□□□□ -0.57
Vcan-201ENSMUST00000109543 Gphb5Q812B2 130 aa11.52□□□□□ -0.57
Vcan-201ENSMUST00000109543 AY761184Q9D848 116 aa11.52□□□□□ -0.57
Vcan-201ENSMUST00000109543 Cited1P97769 203 aa11.51□□□□□ -0.57
Vcan-201ENSMUST00000109543 Spag11Q8K4N2 71 aa11.51□□□□□ -0.57
Vcan-201ENSMUST00000109543 Ucn2Q99ML8 113 aa11.51□□□□□ -0.57
Vcan-201ENSMUST00000109543 PpdpfQ9CR37 115 aa11.51□□□□□ -0.57
Vcan-201ENSMUST00000109543 Gm5464Q3UY29 175 aa11.51□□□□□ -0.57
Vcan-201ENSMUST00000109543 Rs1Q9Z1L4 224 aa11.51□□□□□ -0.57
Vcan-201ENSMUST00000109543 Ighv1-62-2A0A0A6YXZ4 119 aa11.5□□□□□ -0.57
Vcan-201ENSMUST00000109543 Ndufa1O35683 70 aa11.5□□□□□ -0.57
Vcan-201ENSMUST00000109543 Psmb8P28063 276 aa11.5□□□□□ -0.57
Vcan-201ENSMUST00000109543 Reg3gO09049 174 aa11.49□□□□□ -0.57
Vcan-201ENSMUST00000109543 Pglyrp1O88593 182 aa11.49□□□□□ -0.57
Vcan-201ENSMUST00000109543 Synj2bpQ9D6K5 145 aa11.49□□□□□ -0.57
Vcan-201ENSMUST00000109543 Rpl36-ps4A0A140T8U4 117 aa11.49□□□□□ -0.57
Vcan-201ENSMUST00000109543 Gm8439G3UWA7 96 aa11.49□□□□□ -0.57
Vcan-201ENSMUST00000109543 P01753 117 aa11.49□□□□□ -0.57
Vcan-201ENSMUST00000109543 Polr2kQ63871 58 aa11.49□□□□□ -0.57
Vcan-201ENSMUST00000109543 A730046J19RikA0A1B0GSN8 89 aa11.48□□□□□ -0.57
Vcan-201ENSMUST00000109543 Cd33Q63994 403 aa11.48□□□□□ -0.57
Vcan-201ENSMUST00000109543 Prss29Q99MS4 279 aa11.48□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms