RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Gm7849D3YX03 116 aa10.98□□□□□ -0.65
Nup88-202ENSMUST00000108530 Gm3443F7CCV5 94 aa10.98□□□□□ -0.65
Nup88-202ENSMUST00000108530 Cd69P37217 199 aa10.98□□□□□ -0.65
Nup88-202ENSMUST00000108530 Olfr761Q7TRJ0 323 aa10.98□□□□□ -0.65
Nup88-202ENSMUST00000108530 Gm28038F7BCN9 126 aa10.98□□□□□ -0.65
Nup88-202ENSMUST00000108530 S100a4P07091 101 aa10.98□□□□□ -0.65
Nup88-202ENSMUST00000108530 Ighv5-9-1A0A0A6YVS4 126 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 Igkv4-62A0A0G2JDW9 117 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 Gm28305F6U473 122 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 Gm94Q3V2D2 93 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 Clec4b2Q67DU8 208 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 CnfnQ6PCW6 111 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 Defa22Q8C1N8 93 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 Gm20458E9PXJ7 78 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 MdfiP70331 251 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 Runx1Q03347 451 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 Tmem241Q3UME2 297 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 Olfr322Q5NCC8 327 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 Cox7a2lQ61387 111 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 PdpnQ62011 172 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 Wfdc21Q8BTE6 63 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 Crlf1Q9JM58 425 aa10.97□□□□□ -0.65
Nup88-202ENSMUST00000108530 P06328 117 aa10.96□□□□□ -0.65
Nup88-202ENSMUST00000108530 Mc5rP41149 325 aa10.96□□□□□ -0.65
Nup88-202ENSMUST00000108530 Ammecr1lQ8JZZ6 310 aa10.96□□□□□ -0.65
Nup88-202ENSMUST00000108530 Ube2v1Q9CZY3 147 aa10.96□□□□□ -0.65
Nup88-202ENSMUST00000108530 Fam216aQ9DB54 251 aa10.96□□□□□ -0.65
Nup88-202ENSMUST00000108530 Ighv3-3A0A0A6YWL2 116 aa10.96□□□□□ -0.66
Nup88-202ENSMUST00000108530 Khdc1cQ4KL78 166 aa10.96□□□□□ -0.66
Nup88-202ENSMUST00000108530 Fam241bQ9D882 120 aa10.96□□□□□ -0.66
Nup88-202ENSMUST00000108530 Itpr2Q9Z329 2701 aa10.96□□□□□ -0.66
Nup88-202ENSMUST00000108530 Ighv1-75A0A075B5Y2 117 aa10.95□□□□□ -0.66
Nup88-202ENSMUST00000108530 Il22ra1Q80XZ4 581 aa10.95□□□□□ -0.66
Nup88-202ENSMUST00000108530 HampQ9EQ21 83 aa10.95□□□□□ -0.66
Nup88-202ENSMUST00000108530 9530053A07RikE9PVG8 2581 aa10.95□□□□□ -0.66
Nup88-202ENSMUST00000108530 Trbv14A0A140T8L9 115 aa10.95□□□□□ -0.66
Nup88-202ENSMUST00000108530 H2al2bA9Z055 111 aa10.95□□□□□ -0.66
Nup88-202ENSMUST00000108530 AngP21570 145 aa10.95□□□□□ -0.66
Nup88-202ENSMUST00000108530 Bsph1Q3UW26 133 aa10.95□□□□□ -0.66
Nup88-202ENSMUST00000108530 Olfr975Q8VG91 310 aa10.95□□□□□ -0.66
Nup88-202ENSMUST00000108530 Foxi1Q922I5 372 aa10.95□□□□□ -0.66
Nup88-202ENSMUST00000108530 Fmc1Q9CR13 113 aa10.95□□□□□ -0.66
Nup88-202ENSMUST00000108530 Gm15294V9GXA7 121 aa10.95□□□□□ -0.66
Nup88-202ENSMUST00000108530 Hivep3A2A884 2348 aa10.95□□□□□ -0.66
Nup88-202ENSMUST00000108530 Smim10l1A0A087WNQ7 89 aa10.94□□□□□ -0.66
Nup88-202ENSMUST00000108530 Trbv30A0A0B4J1P1 111 aa10.94□□□□□ -0.66
Nup88-202ENSMUST00000108530 Trav14n-2A0A0G2JDF5 121 aa10.94□□□□□ -0.66
Nup88-202ENSMUST00000108530 Spag11Q8K4N2 71 aa10.94□□□□□ -0.66
Nup88-202ENSMUST00000108530 Igkv4-74A0A0B4J1I3 119 aa10.94□□□□□ -0.66
Nup88-202ENSMUST00000108530 Hnrnpa3Q8BG05 379 aaKnown RBP10.94□□□□□ -0.66
Nup88-202ENSMUST00000108530 Clec5aQ9R007 190 aa10.94□□□□□ -0.66
Nup88-202ENSMUST00000108530 Gm26938S4R185 226 aa10.94□□□□□ -0.66
Nup88-202ENSMUST00000108530 Scgb1b19F6WYW0 93 aa10.93□□□□□ -0.66
Nup88-202ENSMUST00000108530 AI854703Q8BIN3 203 aa10.93□□□□□ -0.66
Nup88-202ENSMUST00000108530 Synj2bpQ9D6K5 145 aa10.93□□□□□ -0.66
Nup88-202ENSMUST00000108530 Gpx7Q99LJ6 186 aa10.92□□□□□ -0.66
Nup88-202ENSMUST00000108530 4930564D02RikQ9D4S4 103 aa10.92□□□□□ -0.66
Nup88-202ENSMUST00000108530 Ighv9-1A0A0B4J1P3 117 aa10.92□□□□□ -0.66
Nup88-202ENSMUST00000108530 Cphx2Q8BX39 182 aa10.92□□□□□ -0.66
Nup88-202ENSMUST00000108530 Tex15F8VPN2 2785 aa10.91□□□□□ -0.66
Nup88-202ENSMUST00000108530 Krtap24-1G3X9A2 248 aa10.91□□□□□ -0.66
Nup88-202ENSMUST00000108530 Cacng7P62956 275 aa10.91□□□□□ -0.66
Nup88-202ENSMUST00000108530 C1qcQ02105 246 aa10.91□□□□□ -0.66
Nup88-202ENSMUST00000108530 Tctex1d1Q9D5I4 173 aa10.91□□□□□ -0.66
Nup88-202ENSMUST00000108530 EsdQ9R0P3 282 aa10.91□□□□□ -0.66
Nup88-202ENSMUST00000108530 Gm20517G3UVU6 152 aa10.91□□□□□ -0.66
Nup88-202ENSMUST00000108530 Mrps12O35680 139 aa10.91□□□□□ -0.66
Nup88-202ENSMUST00000108530 Sap30O88574 220 aa10.91□□□□□ -0.66
Nup88-202ENSMUST00000108530 TbpP29037 316 aa10.91□□□□□ -0.66
Nup88-202ENSMUST00000108530 Rbx1P62878 108 aa10.91□□□□□ -0.66
Nup88-202ENSMUST00000108530 Gm1968Q3T9I3 115 aa10.91□□□□□ -0.66
Nup88-202ENSMUST00000108530 4930470P17RikQ9D542 155 aa10.91□□□□□ -0.66
Nup88-202ENSMUST00000108530 Notch3Q61982 2318 aa10.9□□□□□ -0.66
Nup88-202ENSMUST00000108530 Ighv1-62-2A0A0A6YXZ4 119 aa10.9□□□□□ -0.66
Nup88-202ENSMUST00000108530 Smrp1Q2MH31 260 aa10.9□□□□□ -0.66
Nup88-202ENSMUST00000108530 Trappc1Q5NCF2 145 aa10.9□□□□□ -0.66
Nup88-202ENSMUST00000108530 H1fxQ80ZM5 188 aa10.9□□□□□ -0.66
Nup88-202ENSMUST00000108530 Gphb5Q812B2 130 aa10.9□□□□□ -0.66
Nup88-202ENSMUST00000108530 Rnf152Q8BG47 203 aa10.9□□□□□ -0.66
Nup88-202ENSMUST00000108530 Gm10300Q8C8P7 189 aa10.9□□□□□ -0.66
Nup88-202ENSMUST00000108530 Ifitm2Q99J93 144 aa10.9□□□□□ -0.66
Nup88-202ENSMUST00000108530 8030423J24RikQ9CX45 142 aa10.9□□□□□ -0.66
Nup88-202ENSMUST00000108530 A0A1Y7VMQ4 148 aa10.9□□□□□ -0.66
Nup88-202ENSMUST00000108530 Emp2O88662 172 aa10.9□□□□□ -0.66
Nup88-202ENSMUST00000108530 Smim15Q3UTD9 74 aa10.9□□□□□ -0.66
Nup88-202ENSMUST00000108530 Brwd1Q921C3 2304 aa10.89□□□□□ -0.67
Nup88-202ENSMUST00000108530 Trav6-6A0A075B603 114 aa10.89□□□□□ -0.67
Nup88-202ENSMUST00000108530 Gm45213A0A0U1RNZ6 101 aa10.89□□□□□ -0.67
Nup88-202ENSMUST00000108530 Gm765B2RVL9 189 aa10.89□□□□□ -0.67
Nup88-202ENSMUST00000108530 Defa35E9QLQ1 93 aa10.89□□□□□ -0.67
Nup88-202ENSMUST00000108530 Gm16223Q8CBM3 117 aa10.89□□□□□ -0.67
Nup88-202ENSMUST00000108530 Ly6g5bQ8K1T4 194 aa10.89□□□□□ -0.67
Nup88-202ENSMUST00000108530 Ighv1-63A0A075B5X2 117 aa10.89□□□□□ -0.67
Nup88-202ENSMUST00000108530 Sertad4A7DTG3 377 aa10.89□□□□□ -0.67
Nup88-202ENSMUST00000108530 Gm7075D3Z497 112 aa10.89□□□□□ -0.67
Nup88-202ENSMUST00000108530 BtcQ05928 177 aa10.89□□□□□ -0.67
Nup88-202ENSMUST00000108530 Vmn1r216Q8R257 298 aa10.89□□□□□ -0.67
Nup88-202ENSMUST00000108530 Map1lc3aQ91VR7 121 aa10.89□□□□□ -0.67
Nup88-202ENSMUST00000108530 Card19Q9D1I2 183 aa10.88□□□□□ -0.67
Nup88-202ENSMUST00000108530 Rs1Q9Z1L4 224 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 84.6 ms