RNA–Protein interactions for RNA: ENSMUST00000088356.9

Usf3-201, Transcript of Gene model 608, (NCBI), mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Usf3, Length 757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3-201ENSMUST00000088356 Hcfc2Q9D968 241 aa11.15□□□□□ -0.62
Usf3-201ENSMUST00000088356 Rtl10D3YWW5 146 aa11.14□□□□□ -0.63
Usf3-201ENSMUST00000088356 Gm20499D3Z4G5 72 aa11.14□□□□□ -0.63
Usf3-201ENSMUST00000088356 Gm10772F7AIG4 85 aa11.14□□□□□ -0.63
Usf3-201ENSMUST00000088356 Sem1P60897 70 aa11.14□□□□□ -0.63
Usf3-201ENSMUST00000088356 Rpl36aP83882 106 aaKnown RBP11.14□□□□□ -0.63
Usf3-201ENSMUST00000088356 Olfr1168Q7TR25 312 aa11.14□□□□□ -0.63
Usf3-201ENSMUST00000088356 Tmem167bQ80X45 74 aa11.14□□□□□ -0.63
Usf3-201ENSMUST00000088356 Trav19A0A0B4J1K4 119 aa11.13□□□□□ -0.63
Usf3-201ENSMUST00000088356 P01756 117 aa11.13□□□□□ -0.63
Usf3-201ENSMUST00000088356 P01757 117 aa11.13□□□□□ -0.63
Usf3-201ENSMUST00000088356 Edn1P22387 202 aa11.13□□□□□ -0.63
Usf3-201ENSMUST00000088356 Tpt1P63028 172 aaKnown RBP11.13□□□□□ -0.63
Usf3-201ENSMUST00000088356 Atp6v1g3Q8BMC1 118 aa11.13□□□□□ -0.63
Usf3-201ENSMUST00000088356 4930556J24RikQ9D4U7 146 aa11.13□□□□□ -0.63
Usf3-201ENSMUST00000088356 SelenofQ9ERR7 162 aa11.13□□□□□ -0.63
Usf3-201ENSMUST00000088356 Ighv1-11A0A0A6YWI9 117 aa11.12□□□□□ -0.63
Usf3-201ENSMUST00000088356 Igkv3-12A0A140T8P0 119 aa11.12□□□□□ -0.63
Usf3-201ENSMUST00000088356 Foxi3E0CZH3 425 aa11.12□□□□□ -0.63
Usf3-201ENSMUST00000088356 S100a4P07091 101 aa11.12□□□□□ -0.63
Usf3-201ENSMUST00000088356 Stfa2P35174 103 aa11.12□□□□□ -0.63
Usf3-201ENSMUST00000088356 Ube2g2P60605 165 aa11.12□□□□□ -0.63
Usf3-201ENSMUST00000088356 Hspe1Q64433 102 aaKnown RBP11.12□□□□□ -0.63
Usf3-201ENSMUST00000088356 Igkv3-9A0A140T8P4 119 aa11.11□□□□□ -0.63
Usf3-201ENSMUST00000088356 Gm94Q3V2D2 93 aa11.11□□□□□ -0.63
Usf3-201ENSMUST00000088356 Gm9513B3GLJ6 99 aa11.1□□□□□ -0.63
Usf3-201ENSMUST00000088356 CtsgP28293 261 aa11.1□□□□□ -0.63
Usf3-201ENSMUST00000088356 Serf2P84102 59 aa11.1□□□□□ -0.63
Usf3-201ENSMUST00000088356 Rhox4gQ2MDF7 205 aa11.1□□□□□ -0.63
Usf3-201ENSMUST00000088356 Tmem128Q9CZB9 163 aa11.1□□□□□ -0.63
Usf3-201ENSMUST00000088356 Gm10112D3YWP5 117 aa11.09□□□□□ -0.63
Usf3-201ENSMUST00000088356 Foxh1O88621 401 aa11.09□□□□□ -0.63
Usf3-201ENSMUST00000088356 TshbP12656 138 aa11.09□□□□□ -0.63
Usf3-201ENSMUST00000088356 Tmem70Q921N7 253 aa11.09□□□□□ -0.63
Usf3-201ENSMUST00000088356 Trbv16A0A0B4J1H3 115 aa11.08□□□□□ -0.64
Usf3-201ENSMUST00000088356 Gpr15lA0A0B4J1N3 78 aa11.08□□□□□ -0.64
Usf3-201ENSMUST00000088356 Gm43218A0A0G2JGT0 114 aa11.08□□□□□ -0.64
Usf3-201ENSMUST00000088356 Ifi27Q8C6G0 260 aa11.08□□□□□ -0.64
Usf3-201ENSMUST00000088356 Tppp3Q9CRB6 176 aaKnown RBP11.08□□□□□ -0.64
Usf3-201ENSMUST00000088356 D6Ertd527eA0A0N4SWI3 464 aa11.07□□□□□ -0.64
Usf3-201ENSMUST00000088356 D830044I16RikA0A1D5RM53 117 aa11.07□□□□□ -0.64
Usf3-201ENSMUST00000088356 Gm20517G3UVU6 152 aa11.07□□□□□ -0.64
Usf3-201ENSMUST00000088356 A930033H14RikG5E8X6 103 aa11.07□□□□□ -0.64
Usf3-201ENSMUST00000088356 Cox7a2lQ61387 111 aa11.07□□□□□ -0.64
Usf3-201ENSMUST00000088356 Ighv1-15A0A0A6YXA5 117 aa11.06□□□□□ -0.64
Usf3-201ENSMUST00000088356 Ctxnd1A0A1B0GST9 59 aa11.06□□□□□ -0.64
Usf3-201ENSMUST00000088356 Ly6g6fB2RXM6 300 aa11.06□□□□□ -0.64
Usf3-201ENSMUST00000088356 Gm10518F6UQQ9 182 aa11.06□□□□□ -0.64
Usf3-201ENSMUST00000088356 CnbpP53996 178 aaKnown RBP11.06□□□□□ -0.64
Usf3-201ENSMUST00000088356 Wrap73Q9JM98 462 aa11.06□□□□□ -0.64
Usf3-201ENSMUST00000088356 Rpl19P84099 196 aaKnown RBP11.05□□□□□ -0.64
Usf3-201ENSMUST00000088356 A530084C06RikQ3UTW2 186 aa11.05□□□□□ -0.64
Usf3-201ENSMUST00000088356 Pmis2Q497Q9 96 aa11.05□□□□□ -0.64
Usf3-201ENSMUST00000088356 Rab4bQ91ZR1 213 aa11.05□□□□□ -0.64
Usf3-201ENSMUST00000088356 Gkn1Q9CR36 201 aa11.05□□□□□ -0.64
Usf3-201ENSMUST00000088356 Shisal2bQ9D1Y9 158 aa11.05□□□□□ -0.64
Usf3-201ENSMUST00000088356 Ube2g1P62254 170 aa11.04□□□□□ -0.64
Usf3-201ENSMUST00000088356 PkiaP63248 76 aa11.04□□□□□ -0.64
Usf3-201ENSMUST00000088356 Cd84Q18PI6 329 aa11.04□□□□□ -0.64
Usf3-201ENSMUST00000088356 Bex3Q9WTZ9 124 aa11.04□□□□□ -0.64
Usf3-201ENSMUST00000088356 Trav16nA0A075B634 117 aa11.03□□□□□ -0.64
Usf3-201ENSMUST00000088356 Krtap29-1A2A5X4 342 aa11.03□□□□□ -0.64
Usf3-201ENSMUST00000088356 Krtap11-1E9Q2E9 183 aa11.03□□□□□ -0.64
Usf3-201ENSMUST00000088356 Olfr913E9Q716 312 aa11.03□□□□□ -0.64
Usf3-201ENSMUST00000088356 Rbx1P62878 108 aa11.03□□□□□ -0.64
Usf3-201ENSMUST00000088356 9430097D07RikQ8BS47 195 aa11.03□□□□□ -0.64
Usf3-201ENSMUST00000088356 NpbQ8K4P1 119 aa11.03□□□□□ -0.64
Usf3-201ENSMUST00000088356 Pfdn1Q9CWM4 122 aa11.03□□□□□ -0.64
Usf3-201ENSMUST00000088356 ShpkQ9D5J6 476 aa11.03□□□□□ -0.64
Usf3-201ENSMUST00000088356 Ighv1-66A0A075B5X5 117 aa11.02□□□□□ -0.65
Usf3-201ENSMUST00000088356 Trav3n-3A0A0G2JEM0 114 aa11.02□□□□□ -0.65
Usf3-201ENSMUST00000088356 Gm5478D3Z6R0 159 aa11.02□□□□□ -0.65
Usf3-201ENSMUST00000088356 Gm17732E9Q5I2 61 aa11.02□□□□□ -0.65
Usf3-201ENSMUST00000088356 Gm16519F8VQK7 162 aa11.02□□□□□ -0.65
Usf3-201ENSMUST00000088356 Tm2d2Q8R0I4 213 aa11.02□□□□□ -0.65
Usf3-201ENSMUST00000088356 Znf414Q9DCK4 299 aa11.02□□□□□ -0.65
Usf3-201ENSMUST00000088356 Gm10065F6TJM2 114 aa11.01□□□□□ -0.65
Usf3-201ENSMUST00000088356 Ins1P01325 108 aa11.01□□□□□ -0.65
Usf3-201ENSMUST00000088356 1500011B03RikQ3TTH7 73 aa11.01□□□□□ -0.65
Usf3-201ENSMUST00000088356 Olfr1381Q7TQT4 311 aa11.01□□□□□ -0.65
Usf3-201ENSMUST00000088356 Oraov1Q8CH62 137 aa11.01□□□□□ -0.65
Usf3-201ENSMUST00000088356 Vamp5Q9Z2P8 102 aa11.01□□□□□ -0.65
Usf3-201ENSMUST00000088356 Gm21900J3QP38 180 aa11□□□□□ -0.65
Usf3-201ENSMUST00000088356 Olfr1537P34983 314 aa11□□□□□ -0.65
Usf3-201ENSMUST00000088356 Cox17P56394 63 aa11□□□□□ -0.65
Usf3-201ENSMUST00000088356 SnrpcQ62241 159 aa11□□□□□ -0.65
Usf3-201ENSMUST00000088356 Crip3Q6Q6R3 243 aa11□□□□□ -0.65
Usf3-201ENSMUST00000088356 Prss58Q8BW11 241 aa11□□□□□ -0.65
Usf3-201ENSMUST00000088356 Srsf9Q9D0B0 222 aaKnown RBP11□□□□□ -0.65
Usf3-201ENSMUST00000088356 Ighv2-9A0A075B5Q5 116 aa10.99□□□□□ -0.65
Usf3-201ENSMUST00000088356 Gm28845A0A087WR76 214 aa10.99□□□□□ -0.65
Usf3-201ENSMUST00000088356 Map1lc3bQ9CQV6 125 aa10.99□□□□□ -0.65
Usf3-201ENSMUST00000088356 Zfp867E9Q2M4 473 aa10.98□□□□□ -0.65
Usf3-201ENSMUST00000088356 Emp2O88662 172 aa10.98□□□□□ -0.65
Usf3-201ENSMUST00000088356 Spi1P17433 272 aa10.98□□□□□ -0.65
Usf3-201ENSMUST00000088356 Mien1Q9CQ86 115 aa10.98□□□□□ -0.65
Usf3-201ENSMUST00000088356 Lhfpl3Q9CTN8 222 aa10.98□□□□□ -0.65
Usf3-201ENSMUST00000088356 Phlda3Q9WV95 125 aa10.98□□□□□ -0.65
Usf3-201ENSMUST00000088356 Gm20773A0A0A6YXW2 232 aa10.97□□□□□ -0.65
Usf3-201ENSMUST00000088356 Gm20807A0A0A6YXX7 232 aa10.97□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 75.2 ms