Protein–RNA interactions for Protein: Q8BMC1

Atp6v1g3, V-type proton ATPase subunit G 3, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1g3Q8BMC1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Atp6v1g3Q8BMC1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Atp6v1g3Q8BMC1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
Atp6v1g3Q8BMC1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Atp6v1g3Q8BMC1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Atp6v1g3Q8BMC1 Psd-208ENSMUST00000224556 2034 ntBASIC30.38■■■□□ 2.45
Atp6v1g3Q8BMC1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Atp6v1g3Q8BMC1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Atp6v1g3Q8BMC1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Atp6v1g3Q8BMC1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Atp6v1g3Q8BMC1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Atp6v1g3Q8BMC1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Atp6v1g3Q8BMC1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Atp6v1g3Q8BMC1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Atp6v1g3Q8BMC1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Atp6v1g3Q8BMC1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Atp6v1g3Q8BMC1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Atp6v1g3Q8BMC1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Atp6v1g3Q8BMC1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Atp6v1g3Q8BMC1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Atp6v1g3Q8BMC1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Atp6v1g3Q8BMC1 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.87■■■□□ 2.05
Atp6v1g3Q8BMC1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Atp6v1g3Q8BMC1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Atp6v1g3Q8BMC1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.54■■■□□ 2
Atp6v1g3Q8BMC1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Atp6v1g3Q8BMC1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Atp6v1g3Q8BMC1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Atp6v1g3Q8BMC1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.34■■□□□ 1.97
Atp6v1g3Q8BMC1 Gm25239-201ENSMUST00000174915 86 ntBASIC27.26■■□□□ 1.95
Atp6v1g3Q8BMC1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Atp6v1g3Q8BMC1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.19■■□□□ 1.94
Atp6v1g3Q8BMC1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Atp6v1g3Q8BMC1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.1■■□□□ 1.93
Atp6v1g3Q8BMC1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Atp6v1g3Q8BMC1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Atp6v1g3Q8BMC1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Atp6v1g3Q8BMC1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Atp6v1g3Q8BMC1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Atp6v1g3Q8BMC1 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.72■■□□□ 1.87
Atp6v1g3Q8BMC1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Atp6v1g3Q8BMC1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Atp6v1g3Q8BMC1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Atp6v1g3Q8BMC1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Atp6v1g3Q8BMC1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Atp6v1g3Q8BMC1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Atp6v1g3Q8BMC1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Atp6v1g3Q8BMC1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Atp6v1g3Q8BMC1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Atp6v1g3Q8BMC1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.31■■□□□ 1.8
Atp6v1g3Q8BMC1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.29■■□□□ 1.8
Atp6v1g3Q8BMC1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.28■■□□□ 1.8
Atp6v1g3Q8BMC1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Atp6v1g3Q8BMC1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.24■■□□□ 1.79
Atp6v1g3Q8BMC1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Atp6v1g3Q8BMC1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Atp6v1g3Q8BMC1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Atp6v1g3Q8BMC1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Atp6v1g3Q8BMC1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Atp6v1g3Q8BMC1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Atp6v1g3Q8BMC1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.09■■□□□ 1.77
Atp6v1g3Q8BMC1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Atp6v1g3Q8BMC1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Atp6v1g3Q8BMC1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.03■■□□□ 1.76
Atp6v1g3Q8BMC1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26■■□□□ 1.75
Atp6v1g3Q8BMC1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Atp6v1g3Q8BMC1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Atp6v1g3Q8BMC1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
Atp6v1g3Q8BMC1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Atp6v1g3Q8BMC1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.82■■□□□ 1.72
Atp6v1g3Q8BMC1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Atp6v1g3Q8BMC1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Atp6v1g3Q8BMC1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Atp6v1g3Q8BMC1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Atp6v1g3Q8BMC1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Atp6v1g3Q8BMC1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Atp6v1g3Q8BMC1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Atp6v1g3Q8BMC1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Atp6v1g3Q8BMC1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Atp6v1g3Q8BMC1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Atp6v1g3Q8BMC1 Zxda-201ENSMUST00000117281 2621 ntBASIC25.6■■□□□ 1.69
Atp6v1g3Q8BMC1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
Atp6v1g3Q8BMC1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Atp6v1g3Q8BMC1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Atp6v1g3Q8BMC1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Atp6v1g3Q8BMC1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Atp6v1g3Q8BMC1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Atp6v1g3Q8BMC1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.48■■□□□ 1.67
Atp6v1g3Q8BMC1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.47■■□□□ 1.67
Atp6v1g3Q8BMC1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Atp6v1g3Q8BMC1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Atp6v1g3Q8BMC1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Atp6v1g3Q8BMC1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Atp6v1g3Q8BMC1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Atp6v1g3Q8BMC1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Atp6v1g3Q8BMC1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Atp6v1g3Q8BMC1 Gm15042-201ENSMUST00000120212 883 ntBASIC25.38■■□□□ 1.65
Atp6v1g3Q8BMC1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Atp6v1g3Q8BMC1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Atp6v1g3Q8BMC1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms