RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Notch3Q61982 2318 aa12.84□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Zmat4Q8BZ94 229 aa12.83□□□□□ -0.35
Col17a1-202ENSMUST00000086923 Igkv1-35A0A0G2JDE5 120 aa12.83□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Gm3618D3Z4P5 127 aa12.83□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Gm2916Q9D9B9 127 aa12.83□□□□□ -0.36
Col17a1-202ENSMUST00000086923 P06330 118 aa12.83□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Fam222aQ6PGH4 453 aa12.82□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Ube2e2Q91W82 201 aa12.82□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Nup210lQ9D2F7 1881 aa12.82□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Ighv8-5A0A0A6YY60 119 aa12.82□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Egr2P08152 470 aa12.82□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Ighv1-31A0A0A6YWK5 117 aa12.82□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Ighv1-77A0A0G2JGS9 117 aa12.82□□□□□ -0.36
Col17a1-202ENSMUST00000086923 P01658 132 aa12.82□□□□□ -0.36
Col17a1-202ENSMUST00000086923 SptssbQ925E8 76 aa12.82□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Cxcl13O55038 109 aa12.81□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Loxl1P97873 607 aa12.81□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Synj2bpQ9D6K5 145 aa12.81□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Mlst8Q9DCJ1 326 aa12.81□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Ndufc1Q9CQY9 76 aa12.81□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Prp2P05143 317 aa12.81□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Rpl18aP62717 176 aaKnown RBP12.8□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Fam19a4Q7TPG5 135 aa12.8□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Spag11Q8K4N2 71 aa12.8□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Q9D131 166 aa12.8□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Klk5Q9D140 293 aa12.8□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Zfp407G3UVV3 2246 aa12.8□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Zfp648D3Z0W3 525 aa12.8□□□□□ -0.36
Col17a1-202ENSMUST00000086923 3110021N24RikJ3QMN2 152 aa12.8□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Cacna1gQ5SUF7 2381 aa12.8□□□□□ -0.36
Col17a1-202ENSMUST00000086923 NpwA0A1L1STR8 176 aa12.8□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Gm12830F6XVH0 157 aa12.8□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Colca2F8VPY8 239 aa12.8□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Timm17bQ9Z0V7 172 aa12.8□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Gm19935A0A1B0GSF9 52 aa12.79□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Gp9O88186 177 aa12.79□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Cacna1eQ61290 2272 aa12.79□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Zswim8Q3UHH1 1832 aaKnown RBP12.79□□□□□ -0.36
Col17a1-202ENSMUST00000086923 P01723 117 aa12.79□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Csdc2Q91YQ3 154 aa12.79□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Q9CQM1 111 aa12.79□□□□□ -0.36
Col17a1-202ENSMUST00000086923 SisF8VQM5 1818 aa12.79□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Gm19345G3UYD9 124 aa12.79□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Casp8ap2Q9WUF3 1962 aa12.79□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Itgb4A2A863 1818 aa12.79□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Trav13n-1A0A0G2JEU8 110 aa12.78□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Igkv2-109A0A075B5K6 120 aa12.78□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Zfp36P22893 319 aaKnown RBP12.78□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Trav13d-1A0A075B606 110 aa12.77□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Vmo1Q5SXG7 201 aa12.77□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Fam19a5Q91WE9 132 aa12.77□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Zdbf2Q5SS00 2493 aaKnown RBP12.77□□□□□ -0.36
Col17a1-202ENSMUST00000086923 Ncoa6Q9JL19 2067 aa12.77□□□□□ -0.36
Col17a1-202ENSMUST00000086923 C1qcQ02105 246 aa12.77□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Snai3Q9QY31 287 aa12.77□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Tmem263Q9DAM7 115 aa12.76□□□□□ -0.37
Col17a1-202ENSMUST00000086923 P04946 108 aa12.76□□□□□ -0.37
Col17a1-202ENSMUST00000086923 PtprfA2A8L5 1898 aa12.76□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Tanc1Q0VGY8 1856 aa12.76□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Baz2aQ91YE5 1889 aaKnown RBP12.76□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Ighv1-52A0A0A6YXC3 117 aa12.76□□□□□ -0.37
Col17a1-202ENSMUST00000086923 1700010B08RikQ9DAI7 102 aa12.76□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Cfap126Q6P8X9 189 aa12.75□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Minos1Q7TNS2 76 aa12.75□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Pla2g2eQ9QUL3 142 aa12.75□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Rp1P56716 2095 aa12.75□□□□□ -0.37
Col17a1-202ENSMUST00000086923 IgipA0A1B0GR74 53 aa12.75□□□□□ -0.37
Col17a1-202ENSMUST00000086923 OdaphJ3QNT8 126 aa12.75□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Gm5941Q497P9 117 aa12.75□□□□□ -0.37
Col17a1-202ENSMUST00000086923 EnhoQ8K1D8 76 aa12.75□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Sh2d1aO88890 126 aa12.75□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Sptan1P16546 2472 aaKnown RBP12.75□□□□□ -0.37
Col17a1-202ENSMUST00000086923 P18532 116 aa12.74□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Crip1P63254 77 aa12.74□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Gm815Q3UWS2 115 aa12.74□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Trav13n-2A0A0G2JF93 110 aa12.73□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Col6a6Q8C6K9 2265 aa12.73□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Gm21060J3KMU4 56 aa12.73□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Prpf8Q99PV0 2335 aaKnown RBP12.73□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Usf3B2RUQ2 2221 aa12.73□□□□□ -0.37
Col17a1-202ENSMUST00000086923 CrygdP04342 174 aa12.73□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Nlrc5C3VPR6 1915 aa12.73□□□□□ -0.37
Col17a1-202ENSMUST00000086923 P18527 97 aa12.72□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Lyzl4Q9D925 145 aa12.72□□□□□ -0.37
Col17a1-202ENSMUST00000086923 P01738 130 aa12.72□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Igkv3-1A0A075B5P1 119 aa12.72□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Cd59aO55186 123 aa12.72□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Q08AU9 97 aa12.72□□□□□ -0.37
Col17a1-202ENSMUST00000086923 A830031A19RikQ8BNT5 113 aa12.72□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Ndufs5Q99LY9 106 aa12.72□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Lypd8Q9D7S0 255 aa12.72□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Ighv3-6P18531 116 aa12.72□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Znf672Q99LH4 468 aa12.72□□□□□ -0.37
Col17a1-202ENSMUST00000086923 P01729 129 aa12.71□□□□□ -0.37
Col17a1-202ENSMUST00000086923 1500011B03RikQ3TTH7 73 aa12.71□□□□□ -0.37
Col17a1-202ENSMUST00000086923 Ighv1-64A0A075B5X3 117 aa12.7□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Igkv6-15A0A140T8M5 115 aa12.7□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Fam110aQ8R184 296 aa12.7□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Sbf1Q6ZPE2 1867 aa12.7□□□□□ -0.38
Col17a1-202ENSMUST00000086923 Gm17472A0A075B683 117 aa12.7□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 58.5 ms