RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Gm15097E9QA14 449 aa13.53□□□□□ -0.24
Usp48-201ENSMUST00000055131 Dand5Q76LW6 185 aa13.53□□□□□ -0.24
Usp48-201ENSMUST00000055131 Ccl25O35903 144 aa13.53□□□□□ -0.24
Usp48-201ENSMUST00000055131 Spry4Q9WTP2 300 aa13.53□□□□□ -0.24
Usp48-201ENSMUST00000055131 Ndufs7Q9DC70 224 aa13.53□□□□□ -0.24
Usp48-201ENSMUST00000055131 Klk11Q9QYN3 276 aa13.53□□□□□ -0.24
Usp48-201ENSMUST00000055131 Trav6n-6A0A075B6B2 114 aa13.52□□□□□ -0.24
Usp48-201ENSMUST00000055131 Fam240bJ3QMB3 78 aa13.52□□□□□ -0.25
Usp48-201ENSMUST00000055131 P01643 108 aa13.52□□□□□ -0.25
Usp48-201ENSMUST00000055131 Gm8251F6VUT6 1994 aa13.52□□□□□ -0.25
Usp48-201ENSMUST00000055131 Dmrtc1c1Q9D410 238 aa13.52□□□□□ -0.25
Usp48-201ENSMUST00000055131 Igkv4-58A0A0G2JGI6 119 aa13.52□□□□□ -0.25
Usp48-201ENSMUST00000055131 MsmpB1AWI6 139 aa13.52□□□□□ -0.25
Usp48-201ENSMUST00000055131 Gm6034E9Q101 117 aa13.52□□□□□ -0.25
Usp48-201ENSMUST00000055131 Gm19684G3UZ45 117 aa13.52□□□□□ -0.25
Usp48-201ENSMUST00000055131 P04942 107 aa13.51□□□□□ -0.25
Usp48-201ENSMUST00000055131 SelenowP63300 88 aa13.51□□□□□ -0.25
Usp48-201ENSMUST00000055131 UrahQ9CRB3 118 aa13.51□□□□□ -0.25
Usp48-201ENSMUST00000055131 Gm15091B1AZM2 449 aa13.51□□□□□ -0.25
Usp48-201ENSMUST00000055131 4930546C10RikE9Q4Y3 121 aa13.51□□□□□ -0.25
Usp48-201ENSMUST00000055131 Slc25a29Q8BL03 306 aa13.51□□□□□ -0.25
Usp48-201ENSMUST00000055131 Gm20708H3BKF4 155 aa13.51□□□□□ -0.25
Usp48-201ENSMUST00000055131 Col8a2P25318 699 aa13.51□□□□□ -0.25
Usp48-201ENSMUST00000055131 Gp9O88186 177 aa13.51□□□□□ -0.25
Usp48-201ENSMUST00000055131 Tm2d1Q99MB3 208 aa13.51□□□□□ -0.25
Usp48-201ENSMUST00000055131 OdaphJ3QNT8 126 aa13.5□□□□□ -0.25
Usp48-201ENSMUST00000055131 Cox17P56394 63 aa13.5□□□□□ -0.25
Usp48-201ENSMUST00000055131 BlcapP62951 87 aa13.5□□□□□ -0.25
Usp48-201ENSMUST00000055131 Defb47Q30KN1 79 aa13.5□□□□□ -0.25
Usp48-201ENSMUST00000055131 Lyrm9Q3UN90 78 aa13.5□□□□□ -0.25
Usp48-201ENSMUST00000055131 Hrct1Q9D6B9 109 aa13.5□□□□□ -0.25
Usp48-201ENSMUST00000055131 Mrpl55Q9CZ83 127 aa13.5□□□□□ -0.25
Usp48-201ENSMUST00000055131 Trav6-6A0A075B603 114 aa13.49□□□□□ -0.25
Usp48-201ENSMUST00000055131 Gm9949Q8C9F4 104 aa13.49□□□□□ -0.25
Usp48-201ENSMUST00000055131 9930022D16RikQ8BG27 128 aa13.49□□□□□ -0.25
Usp48-201ENSMUST00000055131 Nlrc5C3VPR6 1915 aa13.49□□□□□ -0.25
Usp48-201ENSMUST00000055131 Ighv1-12A0A0A6YXJ9 117 aa13.49□□□□□ -0.25
Usp48-201ENSMUST00000055131 Igkv4-74A0A0B4J1I3 119 aa13.49□□□□□ -0.25
Usp48-201ENSMUST00000055131 Hoxb4P10284 250 aa13.49□□□□□ -0.25
Usp48-201ENSMUST00000055131 Spink10Q8CAC8 162 aa13.49□□□□□ -0.25
Usp48-201ENSMUST00000055131 Jmjd1cQ69ZK6 2350 aa13.49□□□□□ -0.25
Usp48-201ENSMUST00000055131 Inafm2A0A1L1STD6 152 aa13.48□□□□□ -0.25
Usp48-201ENSMUST00000055131 9230109A22RikQ8BHE6 111 aa13.48□□□□□ -0.25
Usp48-201ENSMUST00000055131 CstadQ9D245 104 aa13.48□□□□□ -0.25
Usp48-201ENSMUST00000055131 Wfdc2Q9DAU7 174 aa13.48□□□□□ -0.25
Usp48-201ENSMUST00000055131 Wfdc15bQ9JHY4 80 aa13.48□□□□□ -0.25
Usp48-201ENSMUST00000055131 P01753 117 aa13.48□□□□□ -0.25
Usp48-201ENSMUST00000055131 Znf672Q99LH4 468 aa13.47□□□□□ -0.25
Usp48-201ENSMUST00000055131 BB014433Q8C5R5 389 aa13.47□□□□□ -0.25
Usp48-201ENSMUST00000055131 FancmQ8BGE5 2021 aa13.47□□□□□ -0.25
Usp48-201ENSMUST00000055131 Nxph4G3X9N5 304 aa13.46□□□□□ -0.25
Usp48-201ENSMUST00000055131 Nckap5E9QAE1 1909 aa13.46□□□□□ -0.25
Usp48-201ENSMUST00000055131 Pla2g2aP31482 146 aa13.46□□□□□ -0.25
Usp48-201ENSMUST00000055131 Ang4Q3TMQ6 144 aa13.46□□□□□ -0.25
Usp48-201ENSMUST00000055131 MyofQ69ZN7 2048 aaKnown RBP13.46□□□□□ -0.25
Usp48-201ENSMUST00000055131 Rbmy1bQ60990 380 aa13.46□□□□□ -0.26
Usp48-201ENSMUST00000055131 Col6a4A2AX52 2309 aa13.46□□□□□ -0.26
Usp48-201ENSMUST00000055131 Gm20726G3UX18 150 aa13.45□□□□□ -0.26
Usp48-201ENSMUST00000055131 Ndufa1O35683 70 aa13.45□□□□□ -0.26
Usp48-201ENSMUST00000055131 P01756 117 aa13.45□□□□□ -0.26
Usp48-201ENSMUST00000055131 P01757 117 aa13.45□□□□□ -0.26
Usp48-201ENSMUST00000055131 P01837 106 aa13.45□□□□□ -0.26
Usp48-201ENSMUST00000055131 Gm9913Q8BQQ2 135 aa13.45□□□□□ -0.26
Usp48-201ENSMUST00000055131 Foxi2Q3I5G5 311 aa13.44□□□□□ -0.26
Usp48-201ENSMUST00000055131 Zc2hc1bQ9D534 172 aa13.44□□□□□ -0.26
Usp48-201ENSMUST00000055131 Trip12G5E870 2025 aaKnown RBP13.44□□□□□ -0.26
Usp48-201ENSMUST00000055131 Spata25Q9DA57 226 aa13.44□□□□□ -0.26
Usp48-201ENSMUST00000055131 Greb1Q3UHK3 1954 aa13.44□□□□□ -0.26
Usp48-201ENSMUST00000055131 Zfp951A0A087WRH0 451 aa13.44□□□□□ -0.26
Usp48-201ENSMUST00000055131 Igkv1-122A0A140T8M9 119 aa13.44□□□□□ -0.26
Usp48-201ENSMUST00000055131 GhrhP16043 103 aa13.44□□□□□ -0.26
Usp48-201ENSMUST00000055131 NrgnP60761 78 aa13.44□□□□□ -0.26
Usp48-201ENSMUST00000055131 Ppp1r32Q148A4 427 aa13.44□□□□□ -0.26
Usp48-201ENSMUST00000055131 Cox7a1P56392 80 aa13.44□□□□□ -0.26
Usp48-201ENSMUST00000055131 Ube2bP63147 152 aa13.44□□□□□ -0.26
Usp48-201ENSMUST00000055131 Ighv1-62-2A0A0A6YXZ4 119 aa13.43□□□□□ -0.26
Usp48-201ENSMUST00000055131 Bub3Q9WVA3 326 aa13.43□□□□□ -0.26
Usp48-201ENSMUST00000055131 Ndufb4Q9CQC7 129 aa13.43□□□□□ -0.26
Usp48-201ENSMUST00000055131 Plxnb1Q8CJH3 2119 aa13.42□□□□□ -0.26
Usp48-201ENSMUST00000055131 Lst1O08843 95 aa13.42□□□□□ -0.26
Usp48-201ENSMUST00000055131 Sigmar1O55242 223 aa13.42□□□□□ -0.26
Usp48-201ENSMUST00000055131 MifP34884 115 aaKnown RBP13.42□□□□□ -0.26
Usp48-201ENSMUST00000055131 Rpl39P62892 51 aa13.42□□□□□ -0.26
Usp48-201ENSMUST00000055131 Odf1Q61999 247 aa13.42□□□□□ -0.26
Usp48-201ENSMUST00000055131 1500011B03RikQ3TTH7 73 aa13.42□□□□□ -0.26
Usp48-201ENSMUST00000055131 Cfap126Q6P8X9 189 aa13.42□□□□□ -0.26
Usp48-201ENSMUST00000055131 SrcapA0A087WQ44 3271 aa13.41□□□□□ -0.26
Usp48-201ENSMUST00000055131 Atp6v0e2Q91XE7 81 aa13.41□□□□□ -0.26
Usp48-201ENSMUST00000055131 Ang3P97802 145 aa13.41□□□□□ -0.26
Usp48-201ENSMUST00000055131 Gm4861Q8C5A4 106 aa13.41□□□□□ -0.26
Usp48-201ENSMUST00000055131 C920008G01RikA0A0B4J1N1 112 aa13.41□□□□□ -0.26
Usp48-201ENSMUST00000055131 Fam241bQ9D882 120 aa13.41□□□□□ -0.26
Usp48-201ENSMUST00000055131 Abca4O35600 2310 aa13.41□□□□□ -0.26
Usp48-201ENSMUST00000055131 PrcdQ00LT2 53 aa13.4□□□□□ -0.26
Usp48-201ENSMUST00000055131 Defb18Q30KP5 85 aa13.4□□□□□ -0.26
Usp48-201ENSMUST00000055131 Zmat4Q8BZ94 229 aa13.4□□□□□ -0.26
Usp48-201ENSMUST00000055131 Fhl1P97447 280 aaKnown RBP13.4□□□□□ -0.26
Usp48-201ENSMUST00000055131 Tnfrsf23Q9ER63 176 aa13.4□□□□□ -0.26
Usp48-201ENSMUST00000055131 Glrp1E9Q9S8 174 aa13.4□□□□□ -0.26
Usp48-201ENSMUST00000055131 Foxc1Q61572 553 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms