RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Pou2af1Q64693 256 aa18.01■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Cep290Q6A078 2472 aa18.01■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Gm9961Q8BNV2 113 aa18.01■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Pglyrp1O88593 182 aa18■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Gm15217A2CG07 155 aa18■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 1700010B08RikQ9DAI7 102 aa17.99■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Med13Q5SWW4 2171 aa17.99■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 P04944 107 aa17.99■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 9430069I07RikQ9CX21 111 aa17.98■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Myo9bQ9QY06 2114 aa17.98■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Obox8V9GWY9 217 aa17.98■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Nbl1Q61477 178 aa17.98■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Bub3Q9WVA3 326 aa17.97■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 P01674 108 aa17.97■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Vpreb2P13373 142 aa17.97■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Odf1Q61999 247 aa17.97■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Egr2P08152 470 aa17.97■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Q99M08 65 aa17.97■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Ndufb4Q9CQC7 129 aa17.97■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 IgipA0A1B0GR74 53 aa17.95■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Med12lQ8BQM9 2157 aa17.95■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Trav7-6A0A075B640 112 aa17.95■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Gm21060J3KMU4 56 aa17.95■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Sslp1Q3UN54 99 aa17.95■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Greb1Q3UHK3 1954 aa17.95■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 E030018B13RikJ3QMS9 113 aa17.95■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Mrpl35Q9CQL6 188 aa17.95■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Ighv1-12A0A0A6YXJ9 117 aa17.94■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Erdr1J3QMM0 206 aa17.94■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Pde6gP09174 87 aa17.94■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Luzp4B1AV09 449 aa17.93■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Gm15127B1AVZ5 449 aa17.93■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Gm15107B1B0X0 449 aa17.93■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Tmem254aP0DN89 123 aa17.93■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Tmem254bP0DN90 123 aa17.93■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Tmem254cP0DN91 123 aa17.93■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Nop10Q9CQS2 64 aa17.93■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Gm28539A0A087WSL9 92 aa17.93■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Gm4861Q8C5A4 106 aa17.93■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Spag11Q8K4N2 71 aa17.92■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Shank1D3YZU1 2167 aa17.92■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 P01753 117 aa17.92■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Ndufc1Q9CQY9 76 aa17.91■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Ighv3-1A0A075B5S6 116 aa17.91■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Ccl24Q9JKC0 119 aa17.91■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Gm12353A2AGJ4 60 aa17.91■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Dock7Q8R1A4 2130 aaKnown RBP17.91■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Iglv1A0A075B663 117 aa17.9■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Wnk2Q3UH66 2149 aa17.9■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Cfap126Q6P8X9 189 aa17.9■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Dock10Q8BZN6 2150 aa17.9■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Tmem131O70472 1877 aa17.9■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Ormdl1Q921I0 153 aa17.89■□□□□ 0.46
Sh3rf1-201ENSMUST00000034060 Fam19a4Q7TPG5 135 aa17.89■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 9230109A22RikQ8BHE6 111 aa17.89■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Tmem223Q9CQE2 199 aaKnown RBP17.88■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 CtrlQ9ER05 264 aa17.88■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Rpl39P62892 51 aa17.88■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 MifP34884 115 aaKnown RBP17.88■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Gpr179E9PY61 2293 aa17.87■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Ypel4Q65Z93 127 aa17.86■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Ucn2Q99ML8 113 aa17.86■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 PpdpfQ9CR37 115 aa17.86■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Parp4E9PYK3 1969 aa17.86■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Nckap5E9QAE1 1909 aa17.86■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Gm6034E9Q101 117 aa17.86■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Znf672Q99LH4 468 aa17.86■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Snai3Q9QY31 287 aa17.86■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Cfc1P97766 202 aa17.85■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Eml5Q8BQM8 1977 aa17.85■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Ang3P97802 145 aa17.85■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Dazap2Q9DCP9 168 aa17.85■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Eif4ebp1Q60876 117 aa17.85■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Gm7257D3YX25 99 aa17.84■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Fxyd5P97808 178 aa17.84■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Sox16Q62247 57 aa17.84■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Gm15128A2ADW8 449 aa17.84■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Obsl1D3YYU8 1804 aaKnown RBP17.84■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Ndufa4l2Q4FZG9 87 aa17.83■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Trav9-2A0A075B647 113 aa17.83■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Trav9-4A0A0B4J1K2 113 aa17.83■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Gm42674D3YUT9 64 aa17.83■□□□□ 0.45
Sh3rf1-201ENSMUST00000034060 Tm2d2Q8R0I4 213 aa17.83■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Crip1P63254 77 aa17.82■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Ighv12-3A0A075B5T1 117 aa17.82■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 P01748 117 aa17.82■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 OdaphJ3QNT8 126 aa17.82■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 P01728 117 aa17.82■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Ccl21aP84444 133 aa17.82■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Ccl21bP86792 133 aa17.82■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Ccl21cP86793 133 aa17.82■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 UrahQ9CRB3 118 aa17.82■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Trav9d-3A0A075B695 113 aa17.82■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Ighv1-11A0A0A6YWI9 117 aa17.82■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 BikO70337 150 aa17.82■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Gm17324Q8C6J8 137 aa17.82■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Trav9n-2A0A0G2JDP3 113 aa17.81■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Trbv13-1A0A0B4J1P8 112 aa17.81■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Igf1P05017 153 aa17.81■□□□□ 0.44
Sh3rf1-201ENSMUST00000034060 Gata3P23772 443 aa17.81■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 144.5 ms