RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Nbl1Q61477 178 aa12.67□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Lgals4Q8K419 326 aa12.67□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Scgb1b24B1B0N6 92 aa12.66□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Trav21-dv12A0A075B6C4 109 aa12.66□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Nsun4C4P6S0 806 aaKnown RBP12.66□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Lgals6O54891 301 aa12.65□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Klk13Q8CGR6 276 aa12.65□□□□□ -0.38
Ctcf-201ENSMUST00000005841 PmvkQ9D1G2 192 aa12.65□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Cdkn1aP39689 159 aa12.65□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Gphb5Q812B2 130 aa12.65□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Ifi27l2aQ8R412 90 aa12.65□□□□□ -0.38
Ctcf-201ENSMUST00000005841 Sdk1Q3UH53 2193 aa12.65□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Hoxd3P09027 433 aa12.65□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Gkn1Q9CR36 201 aa12.65□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Mzt1Q8BUR9 78 aa12.64□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Krtap26-1Q9D7N2 215 aa12.64□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Phlda3Q9WV95 125 aa12.64□□□□□ -0.39
Ctcf-201ENSMUST00000005841 LystP97412 3788 aa12.64□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Nav2E9Q842 2432 aa12.64□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Obp2bA2BHR0 176 aa12.64□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Nat8b-psE0CYC6 232 aa12.64□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Ly6gP35461 111 aa12.64□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Egr2P08152 470 aa12.64□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Tex26Q0VB26 296 aa12.64□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Samd5Q3V1H9 173 aa12.63□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Fbn2Q61555 2907 aa12.63□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Gm9961Q8BNV2 113 aa12.63□□□□□ -0.39
Ctcf-201ENSMUST00000005841 P01643 108 aa12.63□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Gm1553Q66VB7 94 aa12.63□□□□□ -0.39
Ctcf-201ENSMUST00000005841 E130116L18RikQ8BMV6 101 aa12.63□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Morn5Q9DAI9 170 aa12.63□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Mrps12O35680 139 aa12.63□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Igkv4-74A0A0B4J1I3 119 aa12.62□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Wipf1Q8K1I7 493 aa12.62□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Tac4Q99N14 128 aa12.62□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Znf414Q9DCK4 299 aa12.62□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Gm28539A0A087WSL9 92 aa12.62□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Dkk4Q8VEJ3 221 aa12.62□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Stpg1Q9D2F5 341 aa12.61□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Apc2Q9Z1K7 2274 aa12.61□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Cks1brtQ3UNC9 96 aa12.61□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Znf580Q9DB38 172 aa12.61□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Dopey1Q8BL99 2399 aa12.61□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Zfp248Q640N4 576 aa12.61□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Tmem219Q9D123 240 aa12.61□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Q9DAQ5 155 aa12.61□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Ighv1-74A0A0G2JGK2 117 aa12.6□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Tcte2E9PY37 120 aa12.6□□□□□ -0.39
Ctcf-201ENSMUST00000005841 P01747 120 aa12.6□□□□□ -0.39
Ctcf-201ENSMUST00000005841 BB014433Q8C5R5 389 aa12.6□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Atp6v0e1Q9CQD8 81 aa12.6□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Adgrg4B7ZCC9 3073 aa12.6□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Fam240aJ3QNP9 97 aa12.6□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Ighv1-62-3P01754 117 aa12.6□□□□□ -0.39
Ctcf-201ENSMUST00000005841 ElaneQ3UP87 265 aa12.6□□□□□ -0.39
Ctcf-201ENSMUST00000005841 ApomQ9Z1R3 190 aa12.6□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Igkv2-137A0A0B4J1H6 120 aa12.59□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Igkv4-69A0A0B4J1I6 116 aa12.59□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Arid1bE9Q4N7 2244 aa12.59□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Gm2564F6Z9S8 108 aa12.59□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Cd52Q64389 74 aa12.59□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Cyyr1Q8VIH7 165 aa12.59□□□□□ -0.39
Ctcf-201ENSMUST00000005841 HilpdaQ9JLS0 64 aa12.59□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Rpl39P62892 51 aa12.58□□□□□ -0.39
Ctcf-201ENSMUST00000005841 Rpl36-ps4A0A140T8U4 117 aa12.58□□□□□ -0.4
Ctcf-201ENSMUST00000005841 BokO35425 213 aa12.58□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Ang2Q64438 145 aa12.58□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Rpl13aP19253 203 aaKnown RBP12.58□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Prr9Q8BV84 116 aa12.58□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Srsf9Q9D0B0 222 aaKnown RBP12.58□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Timm17aQ9Z0V8 171 aa12.58□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Dmrt3Q80WT2 476 aa12.57□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Lyzl4Q9D925 145 aa12.57□□□□□ -0.4
Ctcf-201ENSMUST00000005841 CckP09240 115 aa12.57□□□□□ -0.4
Ctcf-201ENSMUST00000005841 SNORCQ9CXL7 121 aa12.57□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Col6a6Q8C6K9 2265 aa12.56□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Igkv4-57-1A0A075B5M4 119 aa12.56□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Hist1h1tQ07133 208 aa12.56□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Ankrd39Q9D2X0 183 aa12.56□□□□□ -0.4
Ctcf-201ENSMUST00000005841 P06328 117 aa12.56□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Igkv20-101-2A0A0G2JDU3 113 aa12.56□□□□□ -0.4
Ctcf-201ENSMUST00000005841 P06329 120 aa12.56□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Tmem170bP86050 132 aa12.55□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Gm21748Q3UE70 102 aa12.55□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Ang5Q5GAN1 145 aa12.55□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Atp5eP56382 52 aa12.55□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Gatd1Q8BFQ8 220 aa12.55□□□□□ -0.4
Ctcf-201ENSMUST00000005841 AI854703Q8BIN3 203 aa12.55□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Dpm3Q9D1Q4 92 aa12.55□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Cxcl14Q9WUQ5 99 aa12.55□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Ighv1-64A0A075B5X3 117 aa12.55□□□□□ -0.4
Ctcf-201ENSMUST00000005841 C920008G01RikA0A0B4J1N1 112 aa12.55□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Gpr82Q8BZR0 328 aa12.55□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Trbv13-1A0A0B4J1P8 112 aa12.54□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Gm28044L7N1X0 119 aa12.54□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Ccl19O70460 108 aa12.54□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Hcfc1Q61191 2045 aaKnown RBP12.54□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Ly6lH3BJG9 140 aa12.54□□□□□ -0.4
Ctcf-201ENSMUST00000005841 LhbO09108 141 aa12.53□□□□□ -0.4
Ctcf-201ENSMUST00000005841 Lynx1P0DP60 116 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms