RNA–Protein interactions for RNA: YOR006C

TSR3, Transcript of Protein required for 20S pre-rRNA processing, yeastyeast

Gene TSR3, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR3YOR006C PKH2Q12236 1081 aaKnown RBP6.74□□□□□ -1.33
TSR3YOR006C RPL4AP10664 362 aaKnown RBP6.73□□□□□ -1.33
TSR3YOR006C RFA1P22336 621 aaKnown RBP6.73□□□□□ -1.33
TSR3YOR006C DJP1P40564 432 aa6.73□□□□□ -1.33
TSR3YOR006C YFL052WP43551 465 aa6.73□□□□□ -1.33
TSR3YOR006C RPL4BP49626 362 aaKnown RBP6.73□□□□□ -1.33
TSR3YOR006C YNL034WP53963 612 aa6.73□□□□□ -1.33
TSR3YOR006C YNL018CP53976 612 aa6.73□□□□□ -1.33
TSR3YOR006C RCR2Q03446 210 aaKnown RBP6.73□□□□□ -1.33
TSR3YOR006C GIR2Q03768 265 aaPredicted RBP6.73□□□□□ -1.33
TSR3YOR006C YAP6Q03935 383 aa6.73□□□□□ -1.33
TSR3YOR006C DON1Q05610 365 aa6.73□□□□□ -1.33
TSR3YOR006C YDR034W-BQ6Q5X2 51 aa6.73□□□□□ -1.33
TSR3YOR006C NAT1P12945 854 aaKnown RBP6.72□□□□□ -1.33
TSR3YOR006C TOP3P13099 656 aa6.72□□□□□ -1.33
TSR3YOR006C YKL023WP36103 277 aaKnown RBP6.72□□□□□ -1.33
TSR3YOR006C FTR1P40088 404 aa6.72□□□□□ -1.33
TSR3YOR006C NIT3P49954 291 aa6.72□□□□□ -1.33
TSR3YOR006C HCR1Q05775 265 aaKnown RBP6.72□□□□□ -1.33
TSR3YOR006C MRI1Q06489 411 aaKnown RBP6.72□□□□□ -1.33
TSR3YOR006C MRN1Q08925 612 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
TSR3YOR006C AFT2Q08957 416 aa6.72□□□□□ -1.33
TSR3YOR006C SGT2Q12118 346 aaKnown RBP6.72□□□□□ -1.33
TSR3YOR006C HAP2P06774 265 aa6.71□□□□□ -1.34
TSR3YOR006C CIT2P08679 460 aa6.71□□□□□ -1.34
TSR3YOR006C ASP3-2P0CX77 362 aa6.71□□□□□ -1.34
TSR3YOR006C ASP3-3P0CX78 362 aa6.71□□□□□ -1.34
TSR3YOR006C ASP3-4P0CX79 362 aa6.71□□□□□ -1.34
TSR3YOR006C ASP3-1P0CZ17 362 aa6.71□□□□□ -1.34
TSR3YOR006C RNA1P11745 407 aaKnown RBP6.71□□□□□ -1.34
TSR3YOR006C KGD2P19262 463 aaPredicted RBP6.71□□□□□ -1.34
TSR3YOR006C STE11P23561 717 aa6.71□□□□□ -1.34
TSR3YOR006C VPS3P23643 1011 aa6.71□□□□□ -1.34
TSR3YOR006C PSO2P30620 661 aa6.71□□□□□ -1.34
TSR3YOR006C STE13P33894 931 aa6.71□□□□□ -1.34
TSR3YOR006C RFS1P38234 210 aaKnown RBP6.71□□□□□ -1.34
TSR3YOR006C BCD1P38772 366 aa6.71□□□□□ -1.34
TSR3YOR006C YHR131CP38835 850 aa6.71□□□□□ -1.34
TSR3YOR006C LCB2P40970 561 aa6.71□□□□□ -1.34
TSR3YOR006C COS5P47187 383 aa6.71□□□□□ -1.34
TSR3YOR006C TIM8P57744 87 aa6.71□□□□□ -1.34
TSR3YOR006C CLU1Q03690 1277 aaKnown RBP6.71□□□□□ -1.34
TSR3YOR006C GFD1Q04839 188 aaKnown RBP6.71□□□□□ -1.34
TSR3YOR006C YLR224WQ05947 369 aa6.71□□□□□ -1.34
TSR3YOR006C CDC37P06101 506 aaKnown RBP6.7□□□□□ -1.34
TSR3YOR006C MPH2P0CD99 609 aa6.7□□□□□ -1.34
TSR3YOR006C MSP1P28737 362 aa6.7□□□□□ -1.34
TSR3YOR006C CYS3P31373 394 aaKnown RBP6.7□□□□□ -1.34
TSR3YOR006C BET3P36149 193 aa6.7□□□□□ -1.34
TSR3YOR006C ADE17P38009 592 aaKnown RBP6.7□□□□□ -1.34
TSR3YOR006C PBP2P38151 413 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
TSR3YOR006C STB5P38699 743 aa6.7□□□□□ -1.34
TSR3YOR006C YHR054CP38780 354 aa6.7□□□□□ -1.34
TSR3YOR006C CHA4P43634 648 aa6.7□□□□□ -1.34
TSR3YOR006C YGR237CP50089 785 aa6.7□□□□□ -1.34
TSR3YOR006C STB4P50104 949 aa6.7□□□□□ -1.34
TSR3YOR006C NOP13P53883 403 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
TSR3YOR006C CEF1Q03654 590 aaPredicted RBP6.7□□□□□ -1.34
TSR3YOR006C COG4Q06096 861 aa6.7□□□□□ -1.34
TSR3YOR006C PIG1Q06216 648 aa6.7□□□□□ -1.34
TSR3YOR006C YOL075CQ08234 1294 aa6.7□□□□□ -1.34
TSR3YOR006C CTF3Q12748 733 aa6.7□□□□□ -1.34
TSR3YOR006C ATP1P07251 545 aaKnown RBP6.69□□□□□ -1.34
TSR3YOR006C GSY2P27472 705 aa6.69□□□□□ -1.34
TSR3YOR006C RPN12P32496 274 aa6.69□□□□□ -1.34
TSR3YOR006C VPH1P32563 840 aaKnown RBP6.69□□□□□ -1.34
TSR3YOR006C SWI3P32591 825 aa6.69□□□□□ -1.34
TSR3YOR006C NPR3P38742 1146 aa6.69□□□□□ -1.34
TSR3YOR006C CTM1P38818 585 aa6.69□□□□□ -1.34
TSR3YOR006C URM1P40554 99 aaPredicted RBP6.69□□□□□ -1.34
TSR3YOR006C YIR016WP40572 265 aa6.69□□□□□ -1.34
TSR3YOR006C FYV8P46949 817 aaKnown RBP6.69□□□□□ -1.34
TSR3YOR006C SMC3P47037 1230 aa6.69□□□□□ -1.34
TSR3YOR006C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
TSR3YOR006C RTA1P53047 317 aa6.69□□□□□ -1.34
TSR3YOR006C SPC98P53540 846 aa6.69□□□□□ -1.34
TSR3YOR006C DOS2P54858 310 aa6.69□□□□□ -1.34
TSR3YOR006C STP1Q00947 519 aa6.69□□□□□ -1.34
TSR3YOR006C EBS1Q03466 884 aaKnown RBP6.69□□□□□ -1.34
TSR3YOR006C ENV7Q12003 364 aa6.69□□□□□ -1.34
TSR3YOR006C GAL80P04387 435 aa6.68□□□□□ -1.34
TSR3YOR006C CBF2P32504 956 aa6.68□□□□□ -1.34
TSR3YOR006C GCS1P35197 352 aa6.68□□□□□ -1.34
TSR3YOR006C HMT1P38074 348 aa6.68□□□□□ -1.34
TSR3YOR006C PCM1P38628 557 aaKnown RBP6.68□□□□□ -1.34
TSR3YOR006C MPT5P39016 859 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
TSR3YOR006C KAP123P40069 1113 aaKnown RBP6.68□□□□□ -1.34
TSR3YOR006C DAS1P47005 663 aa6.68□□□□□ -1.34
TSR3YOR006C DAM1P53267 343 aa6.68□□□□□ -1.34
TSR3YOR006C EAF7P53911 425 aaKnown RBP6.68□□□□□ -1.34
TSR3YOR006C RPA49Q01080 415 aaPredicted RBP6.68□□□□□ -1.34
TSR3YOR006C CDD1Q06549 142 aa6.68□□□□□ -1.34
TSR3YOR006C YAP7Q08182 245 aa6.68□□□□□ -1.34
TSR3YOR006C DAP1Q12091 152 aa6.68□□□□□ -1.34
TSR3YOR006C SLX4Q12098 748 aa6.68□□□□□ -1.34
TSR3YOR006C MAS1P10507 462 aa6.67□□□□□ -1.34
TSR3YOR006C MRC1P25588 1096 aa6.67□□□□□ -1.34
TSR3YOR006C TYE7P33122 291 aaPredicted RBP6.67□□□□□ -1.34
TSR3YOR006C EMC3P36039 253 aa6.67□□□□□ -1.34
TSR3YOR006C SHE3P38272 425 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms