RNA–Protein interactions for RNA: YNL139C

THO2, Transcript of Subunit of the THO complex, yeast

Gene THO2, Length 4,794 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
THO2	YNL139C	AIM22	P47051	409 aa		0.42	□□□□□ -2.34
THO2	YNL139C	WSC2	P53832	503 aa		0.42	□□□□□ -2.34
THO2	YNL139C	ADE16	P54113	591 aa	Known RBP	0.42	□□□□□ -2.34
THO2	YNL139C	SLG1	P54867	378 aa		0.42	□□□□□ -2.34
THO2	YNL139C	SMX3	P54999	86 aa	Predicted RBP	0.42	□□□□□ -2.34
THO2	YNL139C	UBX5	Q06682	500 aa		0.42	□□□□□ -2.34
THO2	YNL139C	RSC58	Q07979	502 aa		0.42	□□□□□ -2.34
THO2	YNL139C	NOB1	Q08444	459 aa	Known RBP	0.42	□□□□□ -2.34
THO2	YNL139C	REX3	Q12090	404 aa		0.42	□□□□□ -2.34
THO2	YNL139C	WRS1	Q12109	432 aa	Known RBP	0.42	□□□□□ -2.34
THO2	YNL139C	SPE4	Q12455	300 aa		0.42	□□□□□ -2.34
THO2	YNL139C	PDR18	P53756	1333 aa		0.42	□□□□□ -2.34
THO2	YNL139C	OSM1	P21375	501 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	RPB10	P22139	70 aa		0.41	□□□□□ -2.34
THO2	YNL139C	HRR25	P29295	494 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	CRM1	P30822	1084 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	CYS4	P32582	507 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	MRPL15	P36523	253 aa		0.41	□□□□□ -2.34
THO2	YNL139C	UBX7	P38349	436 aa		0.41	□□□□□ -2.34
THO2	YNL139C	CBR1	P38626	284 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	BDH2	P39713	417 aa		0.41	□□□□□ -2.34
THO2	YNL139C	SAP185	P40856	1058 aa		0.41	□□□□□ -2.34
THO2	YNL139C	EPL1	P43572	832 aa		0.41	□□□□□ -2.34
THO2	YNL139C	ALT2	P52892	507 aa		0.41	□□□□□ -2.34
THO2	YNL139C	NRM1	P53718	249 aa		0.41	□□□□□ -2.34
THO2	YNL139C	CDC55	Q00362	526 aa		0.41	□□□□□ -2.34
THO2	YNL139C	IRC4	Q03036	179 aa		0.41	□□□□□ -2.34
THO2	YNL139C	YDR541C	Q03049	344 aa		0.41	□□□□□ -2.34
THO2	YNL139C	YMR160W	Q03823	816 aa		0.41	□□□□□ -2.34
THO2	YNL139C	SPO21	Q12411	609 aa		0.41	□□□□□ -2.34
THO2	YNL139C	SWI5	P08153	709 aa		0.41	□□□□□ -2.34
THO2	YNL139C	AMD1	P15274	810 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	ISY1	P21374	235 aa	Predicted RBP	0.41	□□□□□ -2.34
THO2	YNL139C	CPR3	P25719	182 aa		0.41	□□□□□ -2.34
THO2	YNL139C	YJU2	P28320	278 aa	Predicted RBP	0.41	□□□□□ -2.34
THO2	YNL139C	ARO2	P28777	376 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	SWH1	P35845	1188 aa		0.41	□□□□□ -2.34
THO2	YNL139C	MRPL4	P36517	319 aa		0.41	□□□□□ -2.34
THO2	YNL139C	MMS21	P38632	267 aa		0.41	□□□□□ -2.34
THO2	YNL139C	ACA1	P39970	489 aa		0.41	□□□□□ -2.34
THO2	YNL139C	RPS0B	P46654	252 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	ROD1	Q02805	837 aa		0.41	□□□□□ -2.34
THO2	YNL139C	YPL113C	Q02961	396 aa		0.41	□□□□□ -2.34
THO2	YNL139C	HOT1	Q03213	719 aa		0.41	□□□□□ -2.34
THO2	YNL139C	ABZ2	Q03266	374 aa		0.41	□□□□□ -2.34
THO2	YNL139C	YLR224W	Q05947	369 aa		0.41	□□□□□ -2.34
THO2	YNL139C	RRP15	Q06511	250 aa	Predicted RBP	0.41	□□□□□ -2.34
THO2	YNL139C	MCH1	Q07376	486 aa		0.41	□□□□□ -2.34
THO2	YNL139C	NOC3	Q07896	663 aa	Predicted RBP	0.41	□□□□□ -2.34
THO2	YNL139C	SLX4	Q12098	748 aa		0.41	□□□□□ -2.34
THO2	YNL139C	COX2	P00410	251 aa		0.41	□□□□□ -2.34
THO2	YNL139C	CDC24	P11433	854 aa	Predicted RBP	0.41	□□□□□ -2.34
THO2	YNL139C	STE12	P13574	688 aa		0.41	□□□□□ -2.34
THO2	YNL139C	SDH4	P37298	181 aa		0.41	□□□□□ -2.34
THO2	YNL139C	FTH1	P38310	465 aa		0.41	□□□□□ -2.34
THO2	YNL139C	ATG12	P38316	186 aa		0.41	□□□□□ -2.34
THO2	YNL139C	GID8	P40208	455 aa		0.41	□□□□□ -2.34
THO2	YNL139C	DSN1	P40568	576 aa		0.41	□□□□□ -2.34
THO2	YNL139C	RTS2	P40962	232 aa		0.41	□□□□□ -2.34
THO2	YNL139C	SEC27	P41811	889 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	YPI1	P43587	155 aa		0.41	□□□□□ -2.34
THO2	YNL139C	TRM9	P49957	279 aa		0.41	□□□□□ -2.34
THO2	YNL139C	AZR1	P50080	613 aa		0.41	□□□□□ -2.34
THO2	YNL139C	LCL3	P53153	274 aa		0.41	□□□□□ -2.34
THO2	YNL139C	SNP1	Q00916	300 aa	Predicted RBP	0.41	□□□□□ -2.34
THO2	YNL139C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	0.41	□□□□□ -2.34	not detected
THO2	YNL139C	SLK19	Q08581	821 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	LEU2	P04173	364 aa	Predicted RBP	0.41	□□□□□ -2.34
THO2	YNL139C	ERG20	P08524	352 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	ERG4	P25340	473 aa		0.41	□□□□□ -2.34
THO2	YNL139C	PUT3	P25502	979 aa	Predicted RBP	0.41	□□□□□ -2.34
THO2	YNL139C	VMA3	P25515	160 aa		0.41	□□□□□ -2.34
THO2	YNL139C	UGA4	P32837	571 aa		0.41	□□□□□ -2.34
THO2	YNL139C	YBL036C	P38197	257 aa		0.41	□□□□□ -2.34
THO2	YNL139C	MTO1	P53070	669 aa		0.41	□□□□□ -2.34
THO2	YNL139C	EBS1	Q03466	884 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	TAP42	Q04372	366 aa		0.41	□□□□□ -2.34
THO2	YNL139C	ISR1	Q06098	443 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	PUS7	Q08647	676 aa	Known RBP	0.41	□□□□□ -2.34
THO2	YNL139C	SGF29	P25554	259 aa		0.4	□□□□□ -2.34
THO2	YNL139C	YCR102C	P25608	368 aa		0.4	□□□□□ -2.34
THO2	YNL139C	MSH2	P25847	964 aa		0.4	□□□□□ -2.34
THO2	YNL139C	DAL3	P32459	195 aa		0.4	□□□□□ -2.34
THO2	YNL139C	PET112	P33893	541 aa		0.4	□□□□□ -2.34
THO2	YNL139C	HCS1	P34243	683 aa		0.4	□□□□□ -2.34
THO2	YNL139C	SRX1	P36077	127 aa		0.4	□□□□□ -2.34
THO2	YNL139C	RCK2	P38623	610 aa		0.4	□□□□□ -2.34
THO2	YNL139C	SHU2	P38957	223 aa		0.4	□□□□□ -2.34
THO2	YNL139C	SDH1	Q00711	640 aa		0.4	□□□□□ -2.34
THO2	YNL139C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.4	□□□□□ -2.34	not detected
THO2	YNL139C	NOG1	Q02892	647 aa	Known RBP	0.4	□□□□□ -2.34
THO2	YNL139C	LAP2	Q10740	671 aa		0.4	□□□□□ -2.34
THO2	YNL139C	SUI3	P09064	285 aa	Known RBP	0.4	□□□□□ -2.35
THO2	YNL139C	NAM7	P30771	971 aa	Known RBP	0.4	□□□□□ -2.35
THO2	YNL139C	SIN4	P32259	974 aa		0.4	□□□□□ -2.35
THO2	YNL139C	COY1	P34237	679 aa		0.4	□□□□□ -2.35
THO2	YNL139C	GCS1	P35197	352 aa		0.4	□□□□□ -2.35
THO2	YNL139C	FMP23	P38231	175 aa		0.4	□□□□□ -2.35
THO2	YNL139C	TIM17	P39515	158 aa		0.4	□□□□□ -2.35
THO2	YNL139C	VPS8	P39702	1274 aa		0.4	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms