RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C WHI2P12611 486 aa5.18□□□□□ -1.58
CCS1YMR038C HMG1P12683 1054 aa5.18□□□□□ -1.58
CCS1YMR038C TPM1P17536 199 aaKnown RBP5.18□□□□□ -1.58
CCS1YMR038C SFL1P20134 766 aa5.18□□□□□ -1.58
CCS1YMR038C SWI4P25302 1093 aaKnown RBP5.18□□□□□ -1.58
CCS1YMR038C CCL1P37366 393 aa5.18□□□□□ -1.58
CCS1YMR038C RXT2P38255 430 aa5.18□□□□□ -1.58
CCS1YMR038C PCM1P38628 557 aaKnown RBP5.18□□□□□ -1.58
CCS1YMR038C GAA1P39012 614 aa5.18□□□□□ -1.58
CCS1YMR038C PZF1P39933 429 aa5.18□□□□□ -1.58
CCS1YMR038C LAM5P43560 674 aa5.18□□□□□ -1.58
CCS1YMR038C BNA2P47125 453 aa5.18□□□□□ -1.58
CCS1YMR038C AIM14P53109 570 aa5.18□□□□□ -1.58
CCS1YMR038C TAM41P53230 385 aa5.18□□□□□ -1.58
CCS1YMR038C BNI5P53890 448 aaKnown RBP5.18□□□□□ -1.58
CCS1YMR038C UTP14Q04500 899 aaKnown RBP5.18□□□□□ -1.58
CCS1YMR038C ATG33Q06485 197 aa5.18□□□□□ -1.58
CCS1YMR038C NSE1Q07913 336 aa5.18□□□□□ -1.58
CCS1YMR038C HFI1Q12060 488 aa5.18□□□□□ -1.58
CCS1YMR038C MEX67Q99257 599 aaKnown RBP5.18□□□□□ -1.58
CCS1YMR038C HMG2P12684 1045 aa5.17□□□□□ -1.58
CCS1YMR038C HOM2P13663 365 aaKnown RBP5.17□□□□□ -1.58
CCS1YMR038C EFT1P32324 842 aaKnown RBP5.17□□□□□ -1.58
CCS1YMR038C DEF1P35732 738 aaKnown RBP5.17□□□□□ -1.58
CCS1YMR038C YKR051WP36142 418 aa5.17□□□□□ -1.58
CCS1YMR038C RPP1P38786 293 aa5.17□□□□□ -1.58
CCS1YMR038C EAF5P39995 279 aa5.17□□□□□ -1.58
CCS1YMR038C ULP2P40537 1034 aaPredicted RBP5.17□□□□□ -1.58
CCS1YMR038C UBC9P50623 157 aaPredicted RBP5.17□□□□□ -1.58
CCS1YMR038C YGL138CP53122 345 aa5.17□□□□□ -1.58
CCS1YMR038C TRM13Q12383 476 aa5.17□□□□□ -1.58
CCS1YMR038C YLR415CO13578 112 aa5.16□□□□□ -1.58
CCS1YMR038C ADE4P04046 510 aaKnown RBP5.16□□□□□ -1.58
CCS1YMR038C TRP4P07285 380 aaPredicted RBP5.16□□□□□ -1.58
CCS1YMR038C CLN3P13365 580 aa5.16□□□□□ -1.58
CCS1YMR038C VPS1P21576 704 aaKnown RBP5.16□□□□□ -1.58
CCS1YMR038C SFP1P32432 683 aa5.16□□□□□ -1.58
CCS1YMR038C PEX2P32800 271 aa5.16□□□□□ -1.58
CCS1YMR038C SAS3P34218 831 aa5.16□□□□□ -1.58
CCS1YMR038C MGS1P40151 587 aa5.16□□□□□ -1.58
CCS1YMR038C FIS1P40515 155 aa5.16□□□□□ -1.58
CCS1YMR038C NPY1P53164 384 aa5.16□□□□□ -1.58
CCS1YMR038C CNM67P53865 581 aaKnown RBP5.16□□□□□ -1.58
CCS1YMR038C NSE5Q03718 556 aa5.16□□□□□ -1.58
CCS1YMR038C COG8Q04632 607 aa5.16□□□□□ -1.58
CCS1YMR038C COQ9Q05779 260 aa5.16□□□□□ -1.58
CCS1YMR038C SMC5Q08204 1093 aa5.16□□□□□ -1.58
CCS1YMR038C PKH2Q12236 1081 aaKnown RBP5.16□□□□□ -1.58
CCS1YMR038C IRA2P19158 3079 aa5.16□□□□□ -1.58
CCS1YMR038C MAS1P10507 462 aa5.15□□□□□ -1.59
CCS1YMR038C ADE2P21264 571 aaKnown RBP5.15□□□□□ -1.59
CCS1YMR038C HRR25P29295 494 aaKnown RBP5.15□□□□□ -1.59
CCS1YMR038C TRM2P33753 639 aa5.15□□□□□ -1.59
CCS1YMR038C BMH2P34730 273 aaKnown RBP5.15□□□□□ -1.59
CCS1YMR038C HSL7P38274 827 aa5.15□□□□□ -1.59
CCS1YMR038C SIC1P38634 284 aa5.15□□□□□ -1.59
CCS1YMR038C RIM4P38741 713 aa5.15□□□□□ -1.59
CCS1YMR038C MTR3P48240 250 aaPredicted RBP5.15□□□□□ -1.59
CCS1YMR038C MFM1Q02783 413 aa5.15□□□□□ -1.59
CCS1YMR038C CSM3Q04659 317 aa5.15□□□□□ -1.59
CCS1YMR038C SDH5Q08230 162 aa5.15□□□□□ -1.59
CCS1YMR038C RPS14AP06367 137 aaKnown RBP5.14□□□□□ -1.59
CCS1YMR038C KGD2P19262 463 aaPredicted RBP5.14□□□□□ -1.59
CCS1YMR038C PMI40P29952 429 aaKnown RBP5.14□□□□□ -1.59
CCS1YMR038C RPS14BP39516 138 aaKnown RBP5.14□□□□□ -1.59
CCS1YMR038C ZAP1P47043 880 aa5.14□□□□□ -1.59
CCS1YMR038C ARP5P53946 755 aa5.14□□□□□ -1.59
CCS1YMR038C LEE1Q02799 301 aaKnown RBP5.14□□□□□ -1.59
CCS1YMR038C YGR161W-CQ3E744 92 aa5.14□□□□□ -1.59
CCS1YMR038C CET1O13297 549 aaPredicted RBP5.13□□□□□ -1.59
CCS1YMR038C PDE1P22434 369 aa5.13□□□□□ -1.59
CCS1YMR038C PRP22P24384 1145 aaKnown RBP5.13□□□□□ -1.59
CCS1YMR038C RSA4P25382 515 aaKnown RBP5.13□□□□□ -1.59
CCS1YMR038C PEX34P25584 144 aa5.13□□□□□ -1.59
CCS1YMR038C CCR4P31384 837 aaKnown RBP5.13□□□□□ -1.59
CCS1YMR038C TMT1P32643 299 aa5.13□□□□□ -1.59
CCS1YMR038C ECM32P32644 1121 aaKnown RBP5.13□□□□□ -1.59
CCS1YMR038C ERC1P38767 581 aa5.13□□□□□ -1.59
CCS1YMR038C SPO22P40511 975 aa5.13□□□□□ -1.59
CCS1YMR038C FKH2P41813 862 aa5.13□□□□□ -1.59
CCS1YMR038C SDA1P53313 767 aaKnown RBP5.13□□□□□ -1.59
CCS1YMR038C RET3P53600 189 aa5.13□□□□□ -1.59
CCS1YMR038C SUN4P53616 420 aa5.13□□□□□ -1.59
CCS1YMR038C ARP4P80428 489 aa5.13□□□□□ -1.59
CCS1YMR038C COX4P04037 155 aa5.12□□□□□ -1.59
CCS1YMR038C THR4P16120 514 aaKnown RBP5.12□□□□□ -1.59
CCS1YMR038C PGS1P25578 521 aa5.12□□□□□ -1.59
CCS1YMR038C NGG1P32494 702 aa5.12□□□□□ -1.59
CCS1YMR038C MIP6P38760 659 aaKnown RBP5.12□□□□□ -1.59
CCS1YMR038C SFB3P38810 929 aa5.12□□□□□ -1.59
CCS1YMR038C DOT6P40059 670 aaKnown RBP5.12□□□□□ -1.59
CCS1YMR038C YNR061CP53747 219 aa5.12□□□□□ -1.59
CCS1YMR038C PGA2P53903 129 aa5.12□□□□□ -1.59
CCS1YMR038C NRG1Q03125 231 aa5.12□□□□□ -1.59
CCS1YMR038C YHM2Q04013 314 aa5.12□□□□□ -1.59
CCS1YMR038C YLR040CQ07988 224 aa5.12□□□□□ -1.59
CCS1YMR038C AIM39Q08223 395 aa5.12□□□□□ -1.59
CCS1YMR038C SLK19Q08581 821 aaKnown RBP5.12□□□□□ -1.59
CCS1YMR038C PLP2Q12017 286 aa5.12□□□□□ -1.59
CCS1YMR038C TUF1P02992 437 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms