RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W CHZ1P40019 153 aaPredicted RBP1.57□□□□□ -2.16
PRP39YML046W LAS21P40367 830 aa1.57□□□□□ -2.16
PRP39YML046W ORC5P50874 479 aa1.57□□□□□ -2.16
PRP39YML046W PMS1P14242 873 aa1.56□□□□□ -2.16
PRP39YML046W CBS2P14905 389 aa1.56□□□□□ -2.16
PRP39YML046W HES1P35843 434 aa1.56□□□□□ -2.16
PRP39YML046W YHR033WP38690 423 aa1.56□□□□□ -2.16
PRP39YML046W YHR218WP38899 603 aa1.56□□□□□ -2.16
PRP39YML046W RRP8P38961 392 aaKnown RBP1.56□□□□□ -2.16
PRP39YML046W TUF1P02992 437 aaKnown RBP1.56□□□□□ -2.16
PRP39YML046W PRO3P32263 286 aaKnown RBP1.56□□□□□ -2.16
PRP39YML046W DSS4P32601 143 aa1.56□□□□□ -2.16
PRP39YML046W MTC7P32633 139 aa1.56□□□□□ -2.16
PRP39YML046W ARN1P38731 627 aa1.56□□□□□ -2.16
PRP39YML046W IES1P43579 692 aa1.56□□□□□ -2.16
PRP39YML046W VPS25P47142 202 aa1.56□□□□□ -2.16
PRP39YML046W IZH1Q03419 316 aa1.56□□□□□ -2.16
PRP39YML046W PLM2Q04383 521 aa1.56□□□□□ -2.16
PRP39YML046W HMG2P12684 1045 aa1.55□□□□□ -2.16
PRP39YML046W GLN4P13188 809 aaKnown RBP1.55□□□□□ -2.16
PRP39YML046W PSP1P50896 841 aaKnown RBP1.55□□□□□ -2.16
PRP39YML046W ACS1Q01574 713 aa1.55□□□□□ -2.16
PRP39YML046W APL5Q08951 932 aaKnown RBP1.55□□□□□ -2.16
PRP39YML046W CDC53Q12018 815 aaKnown RBP1.55□□□□□ -2.16
PRP39YML046W CHO2P05374 869 aaKnown RBP1.54□□□□□ -2.16
PRP39YML046W PLC1P32383 869 aa1.54□□□□□ -2.16
PRP39YML046W SAP1P39955 897 aaKnown RBP1.54□□□□□ -2.16
PRP39YML046W SNU71P53207 620 aaKnown RBP1.54□□□□□ -2.16
PRP39YML046W YML119WQ03208 357 aa1.54□□□□□ -2.16
PRP39YML046W CUP1-1P0CX80 61 aa1.54□□□□□ -2.16
PRP39YML046W CUP1-2P0CX81 61 aa1.54□□□□□ -2.16
PRP39YML046W SDH8P38345 138 aa1.54□□□□□ -2.16
PRP39YML046W EFM2P38347 419 aa1.54□□□□□ -2.16
PRP39YML046W MAM1P40065 302 aa1.54□□□□□ -2.16
PRP39YML046W ASG1P40467 964 aa1.54□□□□□ -2.16
PRP39YML046W YMR254CQ04838 102 aa1.53□□□□□ -2.16
PRP39YML046W GUD1Q07729 489 aa1.53□□□□□ -2.16
PRP39YML046W LCB4Q12246 624 aa1.53□□□□□ -2.16
PRP39YML046W Q0010Q9ZZX9 128 aa1.53□□□□□ -2.16
PRP39YML046W HNM1P19807 563 aa1.52□□□□□ -2.17
PRP39YML046W PBP2P38151 413 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
PRP39YML046W UBP16Q02863 499 aa1.52□□□□□ -2.17
PRP39YML046W SIN3P22579 1536 aa1.52□□□□□ -2.17
PRP39YML046W SEC12P11655 471 aa1.52□□□□□ -2.17
PRP39YML046W CBP3P21560 335 aa1.52□□□□□ -2.17
PRP39YML046W AMD2P22580 549 aa1.52□□□□□ -2.17
PRP39YML046W BUD14P27637 709 aa1.52□□□□□ -2.17
PRP39YML046W MSS51P32335 436 aa1.52□□□□□ -2.17
PRP39YML046W TDA3P38758 523 aa1.52□□□□□ -2.17
PRP39YML046W ARP9Q05123 467 aa1.52□□□□□ -2.17
PRP39YML046W ECI1Q05871 280 aa1.52□□□□□ -2.17
PRP39YML046W YLR112WQ12130 139 aa1.52□□□□□ -2.17
PRP39YML046W DNA2P38859 1522 aa1.51□□□□□ -2.17
PRP39YML046W STI1P15705 589 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
PRP39YML046W PDA1P16387 420 aaKnown RBP1.51□□□□□ -2.17
PRP39YML046W YJR061WP40355 935 aa1.51□□□□□ -2.17
PRP39YML046W RET2P43621 546 aa1.51□□□□□ -2.17
PRP39YML046W ESBP6P53918 673 aa1.51□□□□□ -2.17
PRP39YML046W UGO1Q03327 502 aa1.51□□□□□ -2.17
PRP39YML046W PPT2Q12036 173 aa1.51□□□□□ -2.17
PRP39YML046W SPG5P42933 373 aa1.5□□□□□ -2.17
PRP39YML046W YML053CQ04978 212 aa1.5□□□□□ -2.17
PRP39YML046W RAD24P32641 659 aa1.5□□□□□ -2.17
PRP39YML046W TIM23P32897 222 aa1.5□□□□□ -2.17
PRP39YML046W YAT1P80235 687 aa1.5□□□□□ -2.17
PRP39YML046W NSE3Q05541 303 aa1.5□□□□□ -2.17
PRP39YML046W TPA1P40032 644 aaKnown RBP1.49□□□□□ -2.17
PRP39YML046W YGL036WP53185 909 aaPredicted RBP1.49□□□□□ -2.17
PRP39YML046W SQS1P53866 767 aaKnown RBP1.49□□□□□ -2.17
PRP39YML046W POS5Q06892 414 aa1.49□□□□□ -2.17
PRP39YML046W DAP1Q12091 152 aa1.49□□□□□ -2.17
PRP39YML046W SES1P07284 462 aaKnown RBP1.48□□□□□ -2.17
PRP39YML046W MSH2P25847 964 aa1.48□□□□□ -2.17
PRP39YML046W SEC65P29478 273 aa1.48□□□□□ -2.17
PRP39YML046W ATG27P46989 271 aa1.48□□□□□ -2.17
PRP39YML046W MET13P53128 600 aa1.48□□□□□ -2.17
PRP39YML046W MF(ALPHA)2P32435 120 aa1.48□□□□□ -2.17
PRP39YML046W PAM1P37304 830 aaKnown RBP1.48□□□□□ -2.17
PRP39YML046W MTC6P38849 526 aa1.48□□□□□ -2.17
PRP39YML046W VPS41P38959 992 aa1.48□□□□□ -2.17
PRP39YML046W VPS8P39702 1274 aa1.48□□□□□ -2.17
PRP39YML046W CAC2Q04199 468 aa1.48□□□□□ -2.17
PRP39YML046W PDR8Q06149 701 aa1.48□□□□□ -2.17
PRP39YML046W ILV2P07342 687 aaKnown RBP1.47□□□□□ -2.17
PRP39YML046W RMA1P36001 430 aaKnown RBP1.47□□□□□ -2.17
PRP39YML046W VID28P40547 921 aa1.47□□□□□ -2.17
PRP39YML046W YPI1P43587 155 aa1.47□□□□□ -2.17
PRP39YML046W YDL242WQ07746 117 aa1.47□□□□□ -2.17
PRP39YML046W RPS21BQ3E754 87 aaKnown RBP1.47□□□□□ -2.17
PRP39YML046W IML2P47031 731 aa1.46□□□□□ -2.18
PRP39YML046W UBP8P50102 471 aa1.46□□□□□ -2.18
PRP39YML046W BOR1P53838 576 aa1.46□□□□□ -2.18
PRP39YML046W BAR1P12630 587 aa1.46□□□□□ -2.18
PRP39YML046W MSH1P25846 959 aa1.46□□□□□ -2.18
PRP39YML046W RPN2P32565 945 aaKnown RBP1.46□□□□□ -2.18
PRP39YML046W OCT1P35999 772 aa1.46□□□□□ -2.18
PRP39YML046W RIM2P38127 377 aa1.46□□□□□ -2.18
PRP39YML046W LNP1P38878 278 aa1.46□□□□□ -2.18
PRP39YML046W THI3Q07471 609 aa1.46□□□□□ -2.18
PRP39YML046W YLL056CQ12177 298 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms