RNA–Protein interactions for RNA: YML005W

TRM12, Transcript of S-adenosylmethionine-dependent methyltransferase, yeast

Gene TRM12, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM12	YML005W	YGR151C	P53287	111 aa		4.22	□□□□□ -1.73
TRM12	YML005W	REG1	Q00816	1014 aa		4.22	□□□□□ -1.73
TRM12	YML005W	CRF1	Q04930	467 aa		4.22	□□□□□ -1.73
TRM12	YML005W	YSH1	Q06224	779 aa	Predicted RBP	4.22	□□□□□ -1.73
TRM12	YML005W	VIP1	Q06685	1146 aa	Known RBP	4.22	□□□□□ -1.73
TRM12	YML005W	SEM1	O94742	89 aa		4.21	□□□□□ -1.74
TRM12	YML005W	VPS34	P22543	875 aa		4.21	□□□□□ -1.74
TRM12	YML005W	CTS1	P29029	562 aa		4.21	□□□□□ -1.74
TRM12	YML005W	MRP20	P32387	263 aa		4.21	□□□□□ -1.74
TRM12	YML005W	DHR2	P36009	735 aa	Predicted RBP	4.21	□□□□□ -1.74
TRM12	YML005W	JNM1	P36224	373 aa		4.21	□□□□□ -1.74
TRM12	YML005W	UBS1	P38290	277 aa		4.21	□□□□□ -1.74
TRM12	YML005W	DIP5	P53388	608 aa		4.21	□□□□□ -1.74
TRM12	YML005W	RPS15	Q01855	142 aa	Known RBP	4.21	□□□□□ -1.74
TRM12	YML005W	RNT1	Q02555	471 aa		4.21	□□□□□ -1.74
TRM12	YML005W	YPL108W	Q02872	168 aa	Predicted RBP	4.21	□□□□□ -1.74
TRM12	YML005W	RKI1	Q12189	258 aa		4.21	□□□□□ -1.74
TRM12	YML005W	RVB2	Q12464	471 aa	Known RBP	4.21	□□□□□ -1.74
TRM12	YML005W	YLR302C	O13544	120 aa		4.2	□□□□□ -1.74
TRM12	YML005W	ATP2	P00830	511 aa	Known RBP	4.2	□□□□□ -1.74
TRM12	YML005W	HCM1	P25364	564 aa		4.2	□□□□□ -1.74
TRM12	YML005W	URK1	P27515	501 aa		4.2	□□□□□ -1.74
TRM12	YML005W	GEX2	P36173	615 aa		4.2	□□□□□ -1.74
TRM12	YML005W	KSP1	P38691	1029 aa	Known RBP	4.2	□□□□□ -1.74
TRM12	YML005W	ARO9	P38840	513 aa	Predicted RBP	4.2	□□□□□ -1.74
TRM12	YML005W	YJR061W	P40355	935 aa		4.2	□□□□□ -1.74
TRM12	YML005W	SRB7	P47822	140 aa		4.2	□□□□□ -1.74
TRM12	YML005W	YIP4	P53093	235 aa		4.2	□□□□□ -1.74
TRM12	YML005W	YNR061C	P53747	219 aa		4.2	□□□□□ -1.74
TRM12	YML005W	DAK1	P54838	584 aa	Known RBP	4.2	□□□□□ -1.74
TRM12	YML005W	MFM1	Q02783	413 aa		4.2	□□□□□ -1.74
TRM12	YML005W	USA1	Q03714	838 aa		4.2	□□□□□ -1.74
TRM12	YML005W	ENT4	Q07872	247 aa		4.2	□□□□□ -1.74
TRM12	YML005W	NTO1	Q12311	748 aa		4.2	□□□□□ -1.74
TRM12	YML005W	ERP4	Q12450	207 aa		4.2	□□□□□ -1.74
TRM12	YML005W	PPR1	P07272	904 aa	Predicted RBP	4.19	□□□□□ -1.74
TRM12	YML005W	RPB2	P08518	1224 aa	Known RBP	4.19	□□□□□ -1.74
TRM12	YML005W	ERG8	P24521	451 aa		4.19	□□□□□ -1.74
TRM12	YML005W	CAP1	P28495	268 aa	Known RBP	4.19	□□□□□ -1.74
TRM12	YML005W	DEF1	P35732	738 aa	Known RBP	4.19	□□□□□ -1.74
TRM12	YML005W	SUL1	P38359	859 aa		4.19	□□□□□ -1.74
TRM12	YML005W	BUD16	P39988	312 aa		4.19	□□□□□ -1.74
TRM12	YML005W	RBG2	P53295	368 aa	Known RBP	4.19	□□□□□ -1.74
TRM12	YML005W	ARE2	P53629	642 aa	Known RBP	4.19	□□□□□ -1.74
TRM12	YML005W	BUD17	P53727	317 aa		4.19	□□□□□ -1.74
TRM12	YML005W	BSC5	P53755	489 aa		4.19	□□□□□ -1.74
TRM12	YML005W	YSA1	Q01976	231 aa		4.19	□□□□□ -1.74
TRM12	YML005W	TDA9	Q04545	1251 aa		4.19	□□□□□ -1.74
TRM12	YML005W	URN1	Q06525	465 aa	Known RBP	4.19	□□□□□ -1.74
TRM12	YML005W	AIM39	Q08223	395 aa		4.19	□□□□□ -1.74
TRM12	YML005W	TMA16	Q08687	178 aa		4.19	□□□□□ -1.74
TRM12	YML005W	TUB2	P02557	457 aa	Known RBP	4.18	□□□□□ -1.74
TRM12	YML005W	RPL19A	P0CX82	189 aa	Known RBP	4.18	□□□□□ -1.74
TRM12	YML005W	RPL19B	P0CX83	189 aa	Predicted RBP	4.18	□□□□□ -1.74
TRM12	YML005W	STE4	P18851	423 aa		4.18	□□□□□ -1.74
TRM12	YML005W	CMK1	P27466	446 aa	Known RBP	4.18	□□□□□ -1.74
TRM12	YML005W	CDC5	P32562	705 aa		4.18	□□□□□ -1.74
TRM12	YML005W	YPT10	P38146	199 aa		4.18	□□□□□ -1.74
TRM12	YML005W	SDH8	P38345	138 aa		4.18	□□□□□ -1.74
TRM12	YML005W	IST3	P40565	148 aa	Predicted RBP	4.18	□□□□□ -1.74
TRM12	YML005W	YRB30	P53107	440 aa	Predicted RBP	4.18	□□□□□ -1.74
TRM12	YML005W	DUO1	P53168	247 aa	Known RBP	4.18	□□□□□ -1.74
TRM12	YML005W	YNL092W	P53934	400 aa		4.18	□□□□□ -1.74
TRM12	YML005W	UFO1	Q04511	668 aa		4.18	□□□□□ -1.74
TRM12	YML005W	YOL073C	Q08232	322 aa		4.18	□□□□□ -1.74
TRM12	YML005W	CIR2	Q08822	631 aa		4.18	□□□□□ -1.74
TRM12	YML005W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
TRM12	YML005W	SKM1	Q12469	655 aa		4.18	□□□□□ -1.74
TRM12	YML005W	LAM4	P38800	1345 aa		4.18	□□□□□ -1.74
TRM12	YML005W	SUI3	P09064	285 aa	Known RBP	4.17	□□□□□ -1.74
TRM12	YML005W	MRP7	P12687	371 aa		4.17	□□□□□ -1.74
TRM12	YML005W	ABF1	P14164	731 aa		4.17	□□□□□ -1.74
TRM12	YML005W	OLE1	P21147	510 aa	Known RBP	4.17	□□□□□ -1.74
TRM12	YML005W	SGF29	P25554	259 aa		4.17	□□□□□ -1.74
TRM12	YML005W	CNE1	P27825	502 aa		4.17	□□□□□ -1.74
TRM12	YML005W	YBR225W	P38321	900 aa		4.17	□□□□□ -1.74
TRM12	YML005W	NPR2	P39923	615 aa		4.17	□□□□□ -1.74
TRM12	YML005W	IMO32	P53219	342 aa		4.17	□□□□□ -1.74
TRM12	YML005W	ATG4	P53867	494 aa		4.17	□□□□□ -1.74
TRM12	YML005W	TRS23	Q03784	219 aa		4.17	□□□□□ -1.74
TRM12	YML005W	RCO1	Q04779	684 aa		4.17	□□□□□ -1.74
TRM12	YML005W	MFB1	Q04922	465 aa		4.17	□□□□□ -1.74
TRM12	YML005W	PSK2	Q08217	1101 aa		4.17	□□□□□ -1.74
TRM12	YML005W	PRS5	Q12265	496 aa	Known RBP	4.17	□□□□□ -1.74
TRM12	YML005W	PNS1	Q12412	539 aa		4.17	□□□□□ -1.74
TRM12	YML005W	VCX1	Q99385	411 aa		4.17	□□□□□ -1.74
TRM12	YML005W	YML003W	P0CF16	290 aa		4.16	□□□□□ -1.74
TRM12	YML005W	GCD7	P32502	381 aa	Predicted RBP	4.16	□□□□□ -1.74
TRM12	YML005W	NUP120	P35729	1037 aa		4.16	□□□□□ -1.74
TRM12	YML005W	CCL1	P37366	393 aa		4.16	□□□□□ -1.74
TRM12	YML005W	RKM3	P38222	552 aa		4.16	□□□□□ -1.74
TRM12	YML005W	VPS4	P52917	437 aa		4.16	□□□□□ -1.74
TRM12	YML005W	MRPL19	P53875	158 aa		4.16	□□□□□ -1.74
TRM12	YML005W	MDG1	P53885	366 aa		4.16	□□□□□ -1.74
TRM12	YML005W	KIN4	Q01919	800 aa		4.16	□□□□□ -1.74
TRM12	YML005W	MTG1	Q03151	367 aa	Predicted RBP	4.16	□□□□□ -1.74
TRM12	YML005W	YML119W	Q03208	357 aa		4.16	□□□□□ -1.74
TRM12	YML005W	Q0010	Q9ZZX9	128 aa		4.16	□□□□□ -1.74
TRM12	YML005W	YPK1	P12688	680 aa	Known RBP	4.15	□□□□□ -1.74
TRM12	YML005W	AMD2	P22580	549 aa		4.15	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms