RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	SRP68	P38687	599 aa	Known RBP	15.87	■□□□□ 0.13
CCC1	YLR220W	ELO3	P40319	345 aa		15.87	■□□□□ 0.13
CCC1	YLR220W	TAH11	P47112	604 aa		15.87	■□□□□ 0.13
CCC1	YLR220W	RTA1	P53047	317 aa		15.87	■□□□□ 0.13
CCC1	YLR220W	RPL34A	P87262	121 aa	Predicted RBP	15.87	■□□□□ 0.13
CCC1	YLR220W	MET14	Q02196	202 aa		15.87	■□□□□ 0.13
CCC1	YLR220W	OCA6	Q12454	224 aa		15.87	■□□□□ 0.13
CCC1	YLR220W	COX5A	P00424	153 aa		15.86	■□□□□ 0.13
CCC1	YLR220W	ADH4	P10127	382 aa		15.86	■□□□□ 0.13
CCC1	YLR220W	AAT2	P23542	418 aa	Known RBP	15.86	■□□□□ 0.13
CCC1	YLR220W	APM3	P38153	483 aa		15.86	■□□□□ 0.13
CCC1	YLR220W	DOT6	P40059	670 aa	Known RBP	15.86	■□□□□ 0.13
CCC1	YLR220W	GND2	P53319	492 aa		15.86	■□□□□ 0.13
CCC1	YLR220W	SFB2	P53953	876 aa		15.86	■□□□□ 0.13
CCC1	YLR220W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	15.86	■□□□□ 0.13	not detected
CCC1	YLR220W	NOP58	Q12499	511 aa	Known RBP	15.86	■□□□□ 0.13
CCC1	YLR220W	HIS5	P07172	385 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	ERR1	P0CX10	437 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	ERR2	P0CX11	437 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	YME1	P32795	747 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	MUD2	P36084	527 aa	Known RBP	15.85	■□□□□ 0.13
CCC1	YLR220W	NEM1	P38757	446 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	DUN1	P39009	513 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	UBP7	P40453	1071 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	ERR3	P42222	437 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	GYP8	P43570	497 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	ROK1	P45818	564 aa	Predicted RBP	15.85	■□□□□ 0.13
CCC1	YLR220W	YNR063W	P53749	607 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	COG6	P53959	839 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	MSH6	Q03834	1242 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	YHM2	Q04013	314 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	YMR027W	Q04371	470 aa		15.85	■□□□□ 0.13
CCC1	YLR220W	ENO1	P00924	437 aa	Known RBP	15.84	■□□□□ 0.13
CCC1	YLR220W	ARF2	P19146	181 aa	Known RBP	15.84	■□□□□ 0.13
CCC1	YLR220W	SGF29	P25554	259 aa		15.84	■□□□□ 0.13
CCC1	YLR220W	CDC20	P26309	610 aa		15.84	■□□□□ 0.13
CCC1	YLR220W	RPC37	P36121	282 aa		15.84	■□□□□ 0.13
CCC1	YLR220W	ASN2	P49090	572 aa	Known RBP	15.84	■□□□□ 0.13
CCC1	YLR220W	HOS1	Q12214	470 aa		15.84	■□□□□ 0.13
CCC1	YLR220W	CMD1	P06787	147 aa	Known RBP	15.83	■□□□□ 0.12
CCC1	YLR220W	HSF1	P10961	833 aa		15.83	■□□□□ 0.12
CCC1	YLR220W	SWE1	P32944	819 aa		15.83	■□□□□ 0.12
CCC1	YLR220W	MRPL40	P36534	297 aa		15.83	■□□□□ 0.12
CCC1	YLR220W	CHS6	P40955	746 aa		15.83	■□□□□ 0.12
CCC1	YLR220W	ERG10	P41338	398 aa	Known RBP	15.83	■□□□□ 0.12
CCC1	YLR220W	AMA1	P50082	593 aa		15.83	■□□□□ 0.12
CCC1	YLR220W	YNR014W	P53719	212 aa		15.83	■□□□□ 0.12
CCC1	YLR220W	YSH1	Q06224	779 aa	Predicted RBP	15.83	■□□□□ 0.12
CCC1	YLR220W	CLP1	Q08685	445 aa	Predicted RBP	15.83	■□□□□ 0.12
CCC1	YLR220W	PGC1	Q08959	321 aa		15.83	■□□□□ 0.12
CCC1	YLR220W	RPS14A	P06367	137 aa	Known RBP	15.82	■□□□□ 0.12
CCC1	YLR220W	PUP3	P25451	205 aa	Known RBP	15.82	■□□□□ 0.12
CCC1	YLR220W	URA7	P28274	579 aa	Known RBP	15.82	■□□□□ 0.12
CCC1	YLR220W	MRS6	P32864	603 aa	Known RBP	15.82	■□□□□ 0.12
CCC1	YLR220W	KES1	P35844	434 aa	Known RBP	15.82	■□□□□ 0.12
CCC1	YLR220W	YBP1	P38315	674 aa		15.82	■□□□□ 0.12
CCC1	YLR220W	YHL041W	P38730	149 aa		15.82	■□□□□ 0.12
CCC1	YLR220W	CRP1	P38845	465 aa	Known RBP	15.82	■□□□□ 0.12
CCC1	YLR220W	RPS14B	P39516	138 aa	Known RBP	15.82	■□□□□ 0.12
CCC1	YLR220W	DOS2	P54858	310 aa		15.82	■□□□□ 0.12
CCC1	YLR220W	SHR3	Q02774	210 aa		15.82	■□□□□ 0.12
CCC1	YLR220W	YMR160W	Q03823	816 aa		15.82	■□□□□ 0.12
CCC1	YLR220W	PNP1	Q05788	311 aa		15.82	■□□□□ 0.12
CCC1	YLR220W	MPD2	Q99316	277 aa		15.82	■□□□□ 0.12
CCC1	YLR220W	RPS9A	O13516	197 aa	Known RBP	15.81	■□□□□ 0.12
CCC1	YLR220W	FPR1	P20081	114 aa	Known RBP	15.81	■□□□□ 0.12
CCC1	YLR220W	MIH1	P23748	554 aa		15.81	■□□□□ 0.12
CCC1	YLR220W	GID7	P25569	745 aa		15.81	■□□□□ 0.12
CCC1	YLR220W	HEM12	P32347	362 aa	Predicted RBP	15.81	■□□□□ 0.12
CCC1	YLR220W	TYE7	P33122	291 aa	Predicted RBP	15.81	■□□□□ 0.12
CCC1	YLR220W	SMX2	P40204	77 aa	Known RBP	15.81	■□□□□ 0.12
CCC1	YLR220W	DPH1	P40487	425 aa	Known RBP	15.81	■□□□□ 0.12
CCC1	YLR220W	IST3	P40565	148 aa	Predicted RBP	15.81	■□□□□ 0.12
CCC1	YLR220W	ATH1	P48016	1211 aa		15.81	■□□□□ 0.12
CCC1	YLR220W	TRF5	P48561	642 aa	Known RBP	15.81	■□□□□ 0.12
CCC1	YLR220W	STR3	P53101	465 aa	Known RBP	15.81	■□□□□ 0.12
CCC1	YLR220W	RLI1	Q03195	608 aa	Known RBP	15.81	■□□□□ 0.12
CCC1	YLR220W	FRA1	Q07825	749 aa		15.81	■□□□□ 0.12
CCC1	YLR220W	CUE5	Q08412	411 aa	Known RBP	15.81	■□□□□ 0.12
CCC1	YLR220W	YLR046C	Q12253	270 aa		15.81	■□□□□ 0.12
CCC1	YLR220W	PYC1	P11154	1178 aa	Known RBP	15.8	■□□□□ 0.12
CCC1	YLR220W	MRPL8	P22353	238 aa		15.8	■□□□□ 0.12
CCC1	YLR220W	SMF2	P38778	549 aa		15.8	■□□□□ 0.12
CCC1	YLR220W	RMD8	P43620	662 aa		15.8	■□□□□ 0.12
CCC1	YLR220W	YTP1	P53584	459 aa		15.8	■□□□□ 0.12
CCC1	YLR220W	IPI3	P53877	555 aa		15.8	■□□□□ 0.12
CCC1	YLR220W	IMP4	P53941	290 aa	Known RBP	15.8	■□□□□ 0.12
CCC1	YLR220W	NSE1	Q07913	336 aa		15.8	■□□□□ 0.12
CCC1	YLR220W	PEX15	Q08215	383 aa		15.8	■□□□□ 0.12
CCC1	YLR220W	PEX11	Q12462	236 aa		15.8	■□□□□ 0.12
CCC1	YLR220W	SMI1	P32566	505 aa		15.79	■□□□□ 0.12
CCC1	YLR220W	MED6	P38782	295 aa		15.79	■□□□□ 0.12
CCC1	YLR220W	CPR6	P53691	371 aa	Known RBP	15.79	■□□□□ 0.12
CCC1	YLR220W	TEP1	P53916	434 aa		15.79	■□□□□ 0.12
CCC1	YLR220W	SIW14	P53965	281 aa		15.79	■□□□□ 0.12
CCC1	YLR220W	CMS1	Q07897	291 aa	Known RBP	15.79	■□□□□ 0.12
CCC1	YLR220W	MPC54	Q08550	464 aa		15.79	■□□□□ 0.12
CCC1	YLR220W	ILS1	P09436	1072 aa	Known RBP	15.78	■□□□□ 0.12
CCC1	YLR220W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	15.78	■□□□□ 0.12	not detected
CCC1	YLR220W	GEX1	P25596	615 aa		15.78	■□□□□ 0.12

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms