RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W SPP381P38282 291 aaPredicted RBP5.34□□□□□ -1.56
PWP1YLR196W CBR1P38626 284 aaKnown RBP5.34□□□□□ -1.56
PWP1YLR196W PHO12P38693 467 aa5.34□□□□□ -1.56
PWP1YLR196W REV7P38927 245 aa5.34□□□□□ -1.56
PWP1YLR196W RAD55P38953 406 aa5.34□□□□□ -1.56
PWP1YLR196W VAC8P39968 578 aa5.34□□□□□ -1.56
PWP1YLR196W HPM1P40481 377 aa5.34□□□□□ -1.56
PWP1YLR196W CIN5P40917 295 aa5.34□□□□□ -1.56
PWP1YLR196W FAR7P43592 221 aa5.34□□□□□ -1.56
PWP1YLR196W DLD2P46681 530 aaKnown RBP5.34□□□□□ -1.56
PWP1YLR196W HSH155P49955 971 aaKnown RBP5.34□□□□□ -1.56
PWP1YLR196W RAI1P53063 387 aaKnown RBP5.34□□□□□ -1.56
PWP1YLR196W VPS75P53853 264 aa5.34□□□□□ -1.56
PWP1YLR196W SAM50P53969 484 aa5.34□□□□□ -1.56
PWP1YLR196W ADE16P54113 591 aaKnown RBP5.34□□□□□ -1.56
PWP1YLR196W GLO2Q05584 274 aa5.34□□□□□ -1.56
PWP1YLR196W ISR1Q06098 443 aaKnown RBP5.34□□□□□ -1.56
PWP1YLR196W WHI4Q07655 649 aaKnown RBP5.34□□□□□ -1.56
PWP1YLR196W YLL007CQ07799 665 aa5.34□□□□□ -1.56
PWP1YLR196W SIL1Q08199 421 aa5.34□□□□□ -1.56
PWP1YLR196W SGT1Q08446 395 aa5.34□□□□□ -1.56
PWP1YLR196W MMP1Q12372 583 aa5.34□□□□□ -1.56
PWP1YLR196W HMS1Q12398 434 aa5.34□□□□□ -1.56
PWP1YLR196W LAG2Q92325 660 aa5.34□□□□□ -1.56
PWP1YLR196W CBP2P03874 630 aaPredicted RBP5.33□□□□□ -1.56
PWP1YLR196W MET3P08536 511 aa5.33□□□□□ -1.56
PWP1YLR196W RPL8AP17076 256 aaKnown RBP5.33□□□□□ -1.56
PWP1YLR196W URE2P23202 354 aaKnown RBP5.33□□□□□ -1.56
PWP1YLR196W RPI1P23250 407 aaKnown RBP5.33□□□□□ -1.56
PWP1YLR196W SWI4P25302 1093 aaKnown RBP5.33□□□□□ -1.56
PWP1YLR196W YCR101CP25607 182 aa5.33□□□□□ -1.56
PWP1YLR196W KIP1P28742 1111 aa5.33□□□□□ -1.56
PWP1YLR196W RPL8BP29453 256 aaKnown RBP5.33□□□□□ -1.56
PWP1YLR196W MEI5P32489 222 aa5.33□□□□□ -1.56
PWP1YLR196W MDJ1P35191 511 aa5.33□□□□□ -1.56
PWP1YLR196W RSC30P38781 883 aa5.33□□□□□ -1.56
PWP1YLR196W TIF11P38912 153 aaKnown RBP5.33□□□□□ -1.56
PWP1YLR196W YMR147WP40218 223 aaKnown RBP5.33□□□□□ -1.56
PWP1YLR196W ELP2P42935 788 aa5.33□□□□□ -1.56
PWP1YLR196W QRI1P43123 477 aaKnown RBP5.33□□□□□ -1.56
PWP1YLR196W THI11P47183 340 aa5.33□□□□□ -1.56
PWP1YLR196W TAF4P50105 388 aa5.33□□□□□ -1.56
PWP1YLR196W YGR054WP53235 642 aaKnown RBP5.33□□□□□ -1.56
PWP1YLR196W ERV25P54837 211 aaKnown RBP5.33□□□□□ -1.56
PWP1YLR196W SSL1Q04673 461 aaPredicted RBP5.33□□□□□ -1.56
PWP1YLR196W DDC1Q08949 612 aa5.33□□□□□ -1.56
PWP1YLR196W AKR2Q12013 749 aa5.33□□□□□ -1.56
PWP1YLR196W PDC1P06169 563 aaKnown RBP5.32□□□□□ -1.56
PWP1YLR196W RPO26P20435 155 aa5.32□□□□□ -1.56
PWP1YLR196W AEP2P22136 580 aa5.32□□□□□ -1.56
PWP1YLR196W DPB2P24482 689 aaPredicted RBP5.32□□□□□ -1.56
PWP1YLR196W HMX1P32339 317 aa5.32□□□□□ -1.56
PWP1YLR196W RDH54P38086 958 aa5.32□□□□□ -1.56
PWP1YLR196W PBP2P38151 413 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
PWP1YLR196W FTH1P38310 465 aa5.32□□□□□ -1.56
PWP1YLR196W SBE22P38814 852 aa5.32□□□□□ -1.56
PWP1YLR196W VPS45P38932 577 aa5.32□□□□□ -1.56
PWP1YLR196W AST2P39945 430 aaKnown RBP5.32□□□□□ -1.56
PWP1YLR196W PTC2P39966 464 aaKnown RBP5.32□□□□□ -1.56
PWP1YLR196W DLD3P39976 496 aaKnown RBP5.32□□□□□ -1.56
PWP1YLR196W SER3P40054 469 aa5.32□□□□□ -1.56
PWP1YLR196W TFG2P41896 400 aaPredicted RBP5.32□□□□□ -1.56
PWP1YLR196W THI12P42883 340 aa5.32□□□□□ -1.56
PWP1YLR196W SET4P42948 560 aa5.32□□□□□ -1.56
PWP1YLR196W THI5P43534 340 aa5.32□□□□□ -1.56
PWP1YLR196W YJR079WP47126 109 aa5.32□□□□□ -1.56
PWP1YLR196W APT1P49435 187 aaKnown RBP5.32□□□□□ -1.56
PWP1YLR196W SOL4P53315 255 aa5.32□□□□□ -1.56
PWP1YLR196W TOF1P53840 1238 aa5.32□□□□□ -1.56
PWP1YLR196W CNM67P53865 581 aaKnown RBP5.32□□□□□ -1.56
PWP1YLR196W ACS1Q01574 713 aa5.32□□□□□ -1.56
PWP1YLR196W UBP16Q02863 499 aa5.32□□□□□ -1.56
PWP1YLR196W ISU1Q03020 165 aa5.32□□□□□ -1.56
PWP1YLR196W CLU1Q03690 1277 aaKnown RBP5.32□□□□□ -1.56
PWP1YLR196W PRP42Q03776 544 aaKnown RBP5.32□□□□□ -1.56
PWP1YLR196W YDR514CQ04408 483 aa5.32□□□□□ -1.56
PWP1YLR196W THI13Q07748 340 aa5.32□□□□□ -1.56
PWP1YLR196W YLR125WQ12138 136 aa5.32□□□□□ -1.56
PWP1YLR196W ATG11Q12527 1178 aa5.32□□□□□ -1.56
PWP1YLR196W RSF2P46974 1380 aa5.32□□□□□ -1.56
PWP1YLR196W RPS17AP02407 136 aaKnown RBP5.31□□□□□ -1.56
PWP1YLR196W CBP6P07253 162 aaPredicted RBP5.31□□□□□ -1.56
PWP1YLR196W CHS1P08004 1131 aa5.31□□□□□ -1.56
PWP1YLR196W RPS17BP14127 136 aaKnown RBP5.31□□□□□ -1.56
PWP1YLR196W SEC18P18759 758 aaKnown RBP5.31□□□□□ -1.56
PWP1YLR196W VMA16P23968 213 aa5.31□□□□□ -1.56
PWP1YLR196W SEC1P30619 724 aaKnown RBP5.31□□□□□ -1.56
PWP1YLR196W SIN4P32259 974 aa5.31□□□□□ -1.56
PWP1YLR196W DBF20P32328 564 aa5.31□□□□□ -1.56
PWP1YLR196W DAL1P32375 460 aa5.31□□□□□ -1.56
PWP1YLR196W HIR1P32479 840 aa5.31□□□□□ -1.56
PWP1YLR196W GRS1P38088 690 aaKnown RBP5.31□□□□□ -1.56
PWP1YLR196W POL12P38121 705 aaPredicted RBP5.31□□□□□ -1.56
PWP1YLR196W ECM31P38122 312 aa5.31□□□□□ -1.56
PWP1YLR196W RCK2P38623 610 aa5.31□□□□□ -1.56
PWP1YLR196W YHL050CP38721 697 aa5.31□□□□□ -1.56
PWP1YLR196W SSO2P39926 295 aa5.31□□□□□ -1.56
PWP1YLR196W ALG5P40350 334 aa5.31□□□□□ -1.56
PWP1YLR196W YRB2P40517 327 aa5.31□□□□□ -1.56
PWP1YLR196W ARF3P40994 183 aaRIP-Chip data5.31□□□□□ -1.56not detected
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms