RNA–Protein interactions for RNA: YLR136C

TIS11, Transcript of mRNA-binding protein expressed during iron starvation, yeast

Gene TIS11, Length 858 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIS11	YLR136C	USA1	Q03714	838 aa		5.01	□□□□□ -1.61
TIS11	YLR136C	YOL073C	Q08232	322 aa		5.01	□□□□□ -1.61
TIS11	YLR136C	RVB2	Q12464	471 aa	Known RBP	5.01	□□□□□ -1.61
TIS11	YLR136C	TY2A-LR1	P0C2J4	438 aa		5	□□□□□ -1.61
TIS11	YLR136C	TY2A-F	P0CX61	438 aa		5	□□□□□ -1.61
TIS11	YLR136C	TY2A-GR2	P0CX62	438 aa		5	□□□□□ -1.61
TIS11	YLR136C	MET8	P15807	274 aa		5	□□□□□ -1.61
TIS11	YLR136C	TY2A-C	P25383	438 aa		5	□□□□□ -1.61
TIS11	YLR136C	CAP1	P28495	268 aa	Known RBP	5	□□□□□ -1.61
TIS11	YLR136C	DHR2	P36009	735 aa	Predicted RBP	5	□□□□□ -1.61
TIS11	YLR136C	JNM1	P36224	373 aa		5	□□□□□ -1.61
TIS11	YLR136C	UBS1	P38290	277 aa		5	□□□□□ -1.61
TIS11	YLR136C	BUD16	P39988	312 aa		5	□□□□□ -1.61
TIS11	YLR136C	COG1	P53079	417 aa		5	□□□□□ -1.61
TIS11	YLR136C	YGR151C	P53287	111 aa		5	□□□□□ -1.61
TIS11	YLR136C	YPL108W	Q02872	168 aa	Predicted RBP	5	□□□□□ -1.61
TIS11	YLR136C	TY2A-DR2	Q03483	438 aa		5	□□□□□ -1.61
TIS11	YLR136C	YSH1	Q06224	779 aa	Predicted RBP	5	□□□□□ -1.61
TIS11	YLR136C	USV1	Q12132	391 aa		5	□□□□□ -1.61
TIS11	YLR136C	TY2A-B	Q12260	438 aa		5	□□□□□ -1.61
TIS11	YLR136C	TY2A-OR2	Q12293	438 aa		5	□□□□□ -1.61
TIS11	YLR136C	TY2A-DR1	Q12392	438 aa		5	□□□□□ -1.61
TIS11	YLR136C	TY2A-OR1	Q12439	438 aa		5	□□□□□ -1.61
TIS11	YLR136C	TY2A-DR3	Q99303	438 aa		5	□□□□□ -1.61
TIS11	YLR136C	PPR1	P07272	904 aa	Predicted RBP	4.99	□□□□□ -1.61
TIS11	YLR136C	URK1	P27515	501 aa		4.99	□□□□□ -1.61
TIS11	YLR136C	CNS1	P33313	385 aa		4.99	□□□□□ -1.61
TIS11	YLR136C	PPS1	P38148	807 aa		4.99	□□□□□ -1.61
TIS11	YLR136C	RNT1	Q02555	471 aa		4.99	□□□□□ -1.61
TIS11	YLR136C	RKI1	Q12189	258 aa		4.99	□□□□□ -1.61
TIS11	YLR136C	FOB1	O13329	566 aa		4.98	□□□□□ -1.61
TIS11	YLR136C	RPL19A	P0CX82	189 aa	Known RBP	4.98	□□□□□ -1.61
TIS11	YLR136C	RPL19B	P0CX83	189 aa	Predicted RBP	4.98	□□□□□ -1.61
TIS11	YLR136C	CMK1	P27466	446 aa	Known RBP	4.98	□□□□□ -1.61
TIS11	YLR136C	MRP20	P32387	263 aa		4.98	□□□□□ -1.61
TIS11	YLR136C	YPT10	P38146	199 aa		4.98	□□□□□ -1.61
TIS11	YLR136C	SDH8	P38345	138 aa		4.98	□□□□□ -1.61
TIS11	YLR136C	LYS14	P40971	790 aa		4.98	□□□□□ -1.61
TIS11	YLR136C	ZAP1	P47043	880 aa		4.98	□□□□□ -1.61
TIS11	YLR136C	DIP5	P53388	608 aa		4.98	□□□□□ -1.61
TIS11	YLR136C	ATG4	P53867	494 aa		4.98	□□□□□ -1.61
TIS11	YLR136C	RPS15	Q01855	142 aa	Known RBP	4.98	□□□□□ -1.61
TIS11	YLR136C	ATP2	P00830	511 aa	Known RBP	4.97	□□□□□ -1.61
TIS11	YLR136C	RPB2	P08518	1224 aa	Known RBP	4.97	□□□□□ -1.61
TIS11	YLR136C	STE4	P18851	423 aa		4.97	□□□□□ -1.61
TIS11	YLR136C	CNE1	P27825	502 aa		4.97	□□□□□ -1.61
TIS11	YLR136C	CDC5	P32562	705 aa		4.97	□□□□□ -1.61
TIS11	YLR136C	MOH1	P38191	138 aa		4.97	□□□□□ -1.61
TIS11	YLR136C	YJR061W	P40355	935 aa		4.97	□□□□□ -1.61
TIS11	YLR136C	YRB30	P53107	440 aa	Predicted RBP	4.97	□□□□□ -1.61
TIS11	YLR136C	NMA2	P53204	395 aa		4.97	□□□□□ -1.61
TIS11	YLR136C	YNR061C	P53747	219 aa		4.97	□□□□□ -1.61
TIS11	YLR136C	BSC5	P53755	489 aa		4.97	□□□□□ -1.61
TIS11	YLR136C	REG1	Q00816	1014 aa		4.97	□□□□□ -1.61
TIS11	YLR136C	RCO1	Q04779	684 aa		4.97	□□□□□ -1.61
TIS11	YLR136C	CRF1	Q04930	467 aa		4.97	□□□□□ -1.61
TIS11	YLR136C	VIP1	Q06685	1146 aa	Known RBP	4.97	□□□□□ -1.61
TIS11	YLR136C	ERP4	Q12450	207 aa		4.97	□□□□□ -1.61
TIS11	YLR136C	PNO1	Q99216	274 aa	Known RBP	4.97	□□□□□ -1.61
TIS11	YLR136C	MRP7	P12687	371 aa		4.96	□□□□□ -1.62
TIS11	YLR136C	ABF1	P14164	731 aa		4.96	□□□□□ -1.62
TIS11	YLR136C	OLE1	P21147	510 aa	Known RBP	4.96	□□□□□ -1.62
TIS11	YLR136C	ERG8	P24521	451 aa		4.96	□□□□□ -1.62
TIS11	YLR136C	OAR1	P35731	278 aa		4.96	□□□□□ -1.62
TIS11	YLR136C	KSP1	P38691	1029 aa	Known RBP	4.96	□□□□□ -1.62
TIS11	YLR136C	ARO9	P38840	513 aa	Predicted RBP	4.96	□□□□□ -1.62
TIS11	YLR136C	IST3	P40565	148 aa	Predicted RBP	4.96	□□□□□ -1.62
TIS11	YLR136C	RBG2	P53295	368 aa	Known RBP	4.96	□□□□□ -1.62
TIS11	YLR136C	MFM1	Q02783	413 aa		4.96	□□□□□ -1.62
TIS11	YLR136C	YMR206W	Q03695	313 aa		4.96	□□□□□ -1.62
TIS11	YLR136C	UFO1	Q04511	668 aa		4.96	□□□□□ -1.62
TIS11	YLR136C	TDA9	Q04545	1251 aa		4.96	□□□□□ -1.62
TIS11	YLR136C	STP3	Q05937	343 aa		4.96	□□□□□ -1.62
TIS11	YLR136C	TMA16	Q08687	178 aa		4.96	□□□□□ -1.62
TIS11	YLR136C	YLR302C	O13544	120 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	YML003W	P0CF16	290 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	CCL1	P37366	393 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	RKM3	P38222	552 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	YBR225W	P38321	900 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	IRC6	P43615	237 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	ARC1	P46672	376 aa	Known RBP	4.95	□□□□□ -1.62
TIS11	YLR136C	VPS4	P52917	437 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	YIP4	P53093	235 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	IMO32	P53219	342 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	RIA1	P53893	1110 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	YNL092W	P53934	400 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	DAK1	P54838	584 aa	Known RBP	4.95	□□□□□ -1.62
TIS11	YLR136C	TIM10	P87108	93 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	YSA1	Q01976	231 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	PRS5	Q12265	496 aa	Known RBP	4.95	□□□□□ -1.62
TIS11	YLR136C	YBR255C-A	Q3E776	120 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	VCX1	Q99385	411 aa		4.95	□□□□□ -1.62
TIS11	YLR136C	GCD7	P32502	381 aa	Predicted RBP	4.94	□□□□□ -1.62
TIS11	YLR136C	APL3	P38065	1025 aa		4.94	□□□□□ -1.62
TIS11	YLR136C	TDP1	P38319	544 aa		4.94	□□□□□ -1.62
TIS11	YLR136C	NPR2	P39923	615 aa		4.94	□□□□□ -1.62
TIS11	YLR136C	SGM1	P47166	707 aa		4.94	□□□□□ -1.62
TIS11	YLR136C	DUO1	P53168	247 aa	Known RBP	4.94	□□□□□ -1.62
TIS11	YLR136C	ARE2	P53629	642 aa	Known RBP	4.94	□□□□□ -1.62
TIS11	YLR136C	BUD17	P53727	317 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms