RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W MPD2Q99316 277 aa1.22□□□□□ -2.21
PRP16YKR086W SES1P07284 462 aaKnown RBP1.21□□□□□ -2.22
PRP16YKR086W SWI6P09959 803 aa1.21□□□□□ -2.22
PRP16YKR086W PTP1P25044 335 aa1.21□□□□□ -2.22
PRP16YKR086W RPS7AP26786 190 aaKnown RBP1.21□□□□□ -2.22
PRP16YKR086W PRE4P30657 266 aa1.21□□□□□ -2.22
PRP16YKR086W ORC2P32833 620 aa1.21□□□□□ -2.22
PRP16YKR086W CTP1P38152 299 aa1.21□□□□□ -2.22
PRP16YKR086W MUP3P38734 546 aa1.21□□□□□ -2.22
PRP16YKR086W YAP3P38749 330 aa1.21□□□□□ -2.22
PRP16YKR086W SNM1P40993 198 aa1.21□□□□□ -2.22
PRP16YKR086W MPS3P47069 682 aa1.21□□□□□ -2.22
PRP16YKR086W YNL018CP53976 612 aa1.21□□□□□ -2.22
PRP16YKR086W NGL2Q03264 515 aaKnown RBP1.21□□□□□ -2.22
PRP16YKR086W USA1Q03714 838 aa1.21□□□□□ -2.22
PRP16YKR086W MTQ2Q03920 221 aaPredicted RBP1.21□□□□□ -2.22
PRP16YKR086W COG8Q04632 607 aa1.21□□□□□ -2.22
PRP16YKR086W PHM6Q05637 104 aa1.21□□□□□ -2.22
PRP16YKR086W YSH1Q06224 779 aaPredicted RBP1.21□□□□□ -2.22
PRP16YKR086W YFT2Q06676 274 aa1.21□□□□□ -2.22
PRP16YKR086W STF1P01098 86 aa1.21□□□□□ -2.22
PRP16YKR086W HEM1P09950 548 aaPredicted RBP1.21□□□□□ -2.22
PRP16YKR086W SSB1P11484 613 aaKnown RBP1.21□□□□□ -2.22
PRP16YKR086W PRP28P23394 588 aa1.21□□□□□ -2.22
PRP16YKR086W MSH1P25846 959 aa1.21□□□□□ -2.22
PRP16YKR086W MF(ALPHA)2P32435 120 aa1.21□□□□□ -2.22
PRP16YKR086W CRG1P38892 291 aaRIP-Chip data1.21□□□□□ -2.22not detected
PRP16YKR086W OAF1P39720 1047 aaPredicted RBP1.21□□□□□ -2.22
PRP16YKR086W SSB2P40150 613 aaKnown RBP1.21□□□□□ -2.22
PRP16YKR086W UBP7P40453 1071 aa1.21□□□□□ -2.22
PRP16YKR086W UBX6P47049 396 aa1.21□□□□□ -2.22
PRP16YKR086W TAF4P50105 388 aa1.21□□□□□ -2.22
PRP16YKR086W FOL1P53848 824 aa1.21□□□□□ -2.22
PRP16YKR086W YLR407WQ06070 228 aa1.21□□□□□ -2.22
PRP16YKR086W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
PRP16YKR086W CWC2Q12046 339 aaPredicted RBP1.21□□□□□ -2.22
PRP16YKR086W TMA7Q3E764 64 aaKnown RBP1.21□□□□□ -2.22
PRP16YKR086W YPK1P12688 680 aaKnown RBP1.21□□□□□ -2.22
PRP16YKR086W FAT1P38225 669 aa1.21□□□□□ -2.22
PRP16YKR086W TIF5P38431 405 aaKnown RBP1.21□□□□□ -2.22
PRP16YKR086W CCT5P40413 562 aaKnown RBP1.21□□□□□ -2.22
PRP16YKR086W YJR120WP47157 116 aa1.21□□□□□ -2.22
PRP16YKR086W MNT2P53059 558 aa1.21□□□□□ -2.22
PRP16YKR086W YML053CQ04978 212 aa1.21□□□□□ -2.22
PRP16YKR086W BMS1Q08965 1183 aaKnown RBP1.21□□□□□ -2.22
PRP16YKR086W YBR056W-AI2HB52 66 aa1.2□□□□□ -2.22
PRP16YKR086W PDE2P06776 526 aa1.2□□□□□ -2.22
PRP16YKR086W ERG11P10614 530 aa1.2□□□□□ -2.22
PRP16YKR086W PMA2P19657 947 aa1.2□□□□□ -2.22
PRP16YKR086W REC107P21651 314 aa1.2□□□□□ -2.22
PRP16YKR086W CNS1P33313 385 aa1.2□□□□□ -2.22
PRP16YKR086W ENP2P48234 707 aaKnown RBP1.2□□□□□ -2.22
PRP16YKR086W DIP5P53388 608 aa1.2□□□□□ -2.22
PRP16YKR086W ECM9Q02202 377 aa1.2□□□□□ -2.22
PRP16YKR086W YVH1Q02256 364 aaKnown RBP1.2□□□□□ -2.22
PRP16YKR086W YPL068CQ02749 293 aa1.2□□□□□ -2.22
PRP16YKR086W TIM50Q02776 476 aa1.2□□□□□ -2.22
PRP16YKR086W ECM38Q05902 660 aaPredicted RBP1.2□□□□□ -2.22
PRP16YKR086W RKI1Q12189 258 aa1.2□□□□□ -2.22
PRP16YKR086W POM34Q12445 299 aa1.2□□□□□ -2.22
PRP16YKR086W APM4Q99186 491 aa1.2□□□□□ -2.22
PRP16YKR086W ADE6P38972 1358 aaKnown RBP1.2□□□□□ -2.22
PRP16YKR086W LAM4P38800 1345 aa1.2□□□□□ -2.22
PRP16YKR086W TPK2P06245 380 aa1.2□□□□□ -2.22
PRP16YKR086W RPS21AP0C0V8 87 aaKnown RBP1.2□□□□□ -2.22
PRP16YKR086W HOM2P13663 365 aaKnown RBP1.2□□□□□ -2.22
PRP16YKR086W GMH1P36125 273 aa1.2□□□□□ -2.22
PRP16YKR086W FUN12P39730 1002 aaKnown RBP1.2□□□□□ -2.22
PRP16YKR086W GZF3P42944 551 aaKnown RBP1.2□□□□□ -2.22
PRP16YKR086W ASN1P49089 572 aaKnown RBP1.2□□□□□ -2.22
PRP16YKR086W YGL081WP53156 320 aa1.2□□□□□ -2.22
PRP16YKR086W SND1Q04007 877 aa1.2□□□□□ -2.22
PRP16YKR086W GFD1Q04839 188 aaKnown RBP1.2□□□□□ -2.22
PRP16YKR086W ICT1Q12385 394 aa1.2□□□□□ -2.22
PRP16YKR086W PAB1P04147 577 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
PRP16YKR086W SUI3P09064 285 aaKnown RBP1.19□□□□□ -2.22
PRP16YKR086W TUP1P16649 713 aa1.19□□□□□ -2.22
PRP16YKR086W FUR1P18562 216 aaKnown RBP1.19□□□□□ -2.22
PRP16YKR086W VPS34P22543 875 aa1.19□□□□□ -2.22
PRP16YKR086W PET127P32606 800 aa1.19□□□□□ -2.22
PRP16YKR086W TOM20P35180 183 aa1.19□□□□□ -2.22
PRP16YKR086W MRPL7P36519 292 aa1.19□□□□□ -2.22
PRP16YKR086W STB5P38699 743 aa1.19□□□□□ -2.22
PRP16YKR086W FTR1P40088 404 aa1.19□□□□□ -2.22
PRP16YKR086W YNL092WP53934 400 aa1.19□□□□□ -2.22
PRP16YKR086W ERO1Q03103 563 aa1.19□□□□□ -2.22
PRP16YKR086W SKY1Q03656 742 aa1.19□□□□□ -2.22
PRP16YKR086W YCG1Q06680 1035 aa1.19□□□□□ -2.22
PRP16YKR086W NGL1Q08213 363 aaKnown RBP1.19□□□□□ -2.22
PRP16YKR086W TGS1Q12052 315 aa1.19□□□□□ -2.22
PRP16YKR086W ADE5,7P07244 802 aaKnown RBP1.19□□□□□ -2.22
PRP16YKR086W YEL076C-AP0CX16 216 aa1.19□□□□□ -2.22
PRP16YKR086W YLR464WP0CX17 216 aa1.19□□□□□ -2.22
PRP16YKR086W HXT4P32467 576 aa1.19□□□□□ -2.22
PRP16YKR086W YKL133CP36066 463 aa1.19□□□□□ -2.22
PRP16YKR086W TAF5P38129 798 aa1.19□□□□□ -2.22
PRP16YKR086W YEL076CP39971 216 aa1.19□□□□□ -2.22
PRP16YKR086W EMP65P40085 556 aa1.19□□□□□ -2.22
PRP16YKR086W XBP1P40489 647 aa1.19□□□□□ -2.22
PRP16YKR086W MNN11P46985 422 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms