RNA–Protein interactions for RNA: YJR005C-A

LSO1, Transcript of Putative protein of unknown function, yeast

Gene LSO1, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSO1	YJR005C-A	ALY2	P47029	1046 aa		4.6	□□□□□ -1.67
LSO1	YJR005C-A	RSM26	P47141	266 aa		4.6	□□□□□ -1.67
LSO1	YJR005C-A	RTA1	P53047	317 aa		4.6	□□□□□ -1.67
LSO1	YJR005C-A	YGR130C	P53278	816 aa		4.6	□□□□□ -1.67
LSO1	YJR005C-A	STP1	Q00947	519 aa		4.6	□□□□□ -1.67
LSO1	YJR005C-A	ULP1	Q02724	621 aa		4.6	□□□□□ -1.67
LSO1	YJR005C-A	INA17	Q02888	182 aa		4.6	□□□□□ -1.67
LSO1	YJR005C-A	SKY1	Q03656	742 aa		4.6	□□□□□ -1.67
LSO1	YJR005C-A	FAR8	Q05040	523 aa		4.6	□□□□□ -1.67
LSO1	YJR005C-A	MRX10	Q05648	414 aa		4.6	□□□□□ -1.67
LSO1	YJR005C-A	AAD4	Q07747	329 aa		4.6	□□□□□ -1.67
LSO1	YJR005C-A	DIS3	Q08162	1001 aa	Known RBP	4.6	□□□□□ -1.67
LSO1	YJR005C-A	DDC1	Q08949	612 aa		4.6	□□□□□ -1.67
LSO1	YJR005C-A	NCA2	Q12374	616 aa		4.6	□□□□□ -1.67
LSO1	YJR005C-A	ILV2	P07342	687 aa	Known RBP	4.59	□□□□□ -1.67
LSO1	YJR005C-A	HEM15	P16622	393 aa		4.59	□□□□□ -1.67
LSO1	YJR005C-A	CDC10	P25342	322 aa	Known RBP	4.59	□□□□□ -1.67
LSO1	YJR005C-A	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
LSO1	YJR005C-A	URA7	P28274	579 aa	Known RBP	4.59	□□□□□ -1.67
LSO1	YJR005C-A	CYS3	P31373	394 aa	Known RBP	4.59	□□□□□ -1.67
LSO1	YJR005C-A	RAD5	P32849	1169 aa	Predicted RBP	4.59	□□□□□ -1.67
LSO1	YJR005C-A	KES1	P35844	434 aa	Known RBP	4.59	□□□□□ -1.67
LSO1	YJR005C-A	PAM1	P37304	830 aa	Known RBP	4.59	□□□□□ -1.67
LSO1	YJR005C-A	MSR1	P38714	643 aa		4.59	□□□□□ -1.67
LSO1	YJR005C-A	PRK1	P40494	810 aa		4.59	□□□□□ -1.67
LSO1	YJR005C-A	GUF1	P46943	645 aa		4.59	□□□□□ -1.67
LSO1	YJR005C-A	PEX31	P53203	462 aa		4.59	□□□□□ -1.67
LSO1	YJR005C-A	BUD9	P53226	547 aa		4.59	□□□□□ -1.67
LSO1	YJR005C-A	YMR102C	Q03177	834 aa		4.59	□□□□□ -1.67
LSO1	YJR005C-A	SND1	Q04007	877 aa		4.59	□□□□□ -1.67
LSO1	YJR005C-A	TAF9	Q05027	157 aa		4.59	□□□□□ -1.67
LSO1	YJR005C-A	APC5	Q08683	685 aa		4.59	□□□□□ -1.67
LSO1	YJR005C-A	YPL225W	Q08971	146 aa	Known RBP	4.59	□□□□□ -1.67
LSO1	YJR005C-A	NBP2	Q12163	236 aa		4.59	□□□□□ -1.67
LSO1	YJR005C-A	IZH4	Q99393	312 aa		4.59	□□□□□ -1.67
LSO1	YJR005C-A	TEF1	P02994	458 aa	Known RBP	4.58	□□□□□ -1.68
LSO1	YJR005C-A	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
LSO1	YJR005C-A	SSC1	P0CS90	654 aa	Known RBP	4.58	□□□□□ -1.68
LSO1	YJR005C-A	AAD3	P25612	363 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	HXT3	P32466	567 aa	Known RBP	4.58	□□□□□ -1.68
LSO1	YJR005C-A	PEX5	P35056	612 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	OMA1	P36163	345 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	YBP1	P38315	674 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	DIA4	P38705	446 aa	Predicted RBP	4.58	□□□□□ -1.68
LSO1	YJR005C-A	OTU2	P38747	307 aa	Known RBP	4.58	□□□□□ -1.68
LSO1	YJR005C-A	SMF2	P38778	549 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	LIN1	P38852	340 aa	Predicted RBP	4.58	□□□□□ -1.68
LSO1	YJR005C-A	SPC97	P38863	823 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	MRX1	P40050	688 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	CNN1	P43618	361 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	YGR127W	P53275	312 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	VPS9	P54787	451 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	SLU7	Q02775	382 aa	Known RBP	4.58	□□□□□ -1.68
LSO1	YJR005C-A	MAG2	Q06436	670 aa	Known RBP	4.58	□□□□□ -1.68
LSO1	YJR005C-A	YDL073W	Q07454	984 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	AAD15	Q08361	143 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	GPM2	Q12008	311 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	PKH2	Q12236	1081 aa	Known RBP	4.58	□□□□□ -1.68
LSO1	YJR005C-A	YDR524C-B	Q3E6R4	66 aa		4.58	□□□□□ -1.68
LSO1	YJR005C-A	EFG1	Q3E705	233 aa	Known RBP	4.58	□□□□□ -1.68
LSO1	YJR005C-A	HAP2	P06774	265 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	HEM1	P09950	548 aa	Predicted RBP	4.57	□□□□□ -1.68
LSO1	YJR005C-A	IMA3	P0CW40	589 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	IMA4	P0CW41	589 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	TIF1	P10081	395 aa	Known RBP	4.57	□□□□□ -1.68
LSO1	YJR005C-A	NAR1	P23503	491 aa	Known RBP	4.57	□□□□□ -1.68
LSO1	YJR005C-A	YCR015C	P25616	317 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	URA10	P30402	227 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	NDI1	P32340	513 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	MRE11	P32829	692 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	TKL2	P33315	681 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	HSP78	P33416	811 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	MRPL7	P36519	292 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	YBR062C	P38239	180 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	YSW1	P38280	609 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	RAD55	P38953	406 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	YJL206C	P39529	758 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	ERP2	P39704	215 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	RPL34B	P40525	121 aa	Known RBP	4.57	□□□□□ -1.68
LSO1	YJR005C-A	MND2	P40577	368 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	RRT5	P43607	289 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	SPO74	P45819	413 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	YJL045W	P47052	634 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	MTD1	Q02046	320 aa	Known RBP	4.57	□□□□□ -1.68
LSO1	YJR005C-A	ADA2	Q02336	434 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	YMR160W	Q03823	816 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	SPG3	Q04398	127 aa	Predicted RBP	4.57	□□□□□ -1.68
LSO1	YJR005C-A	ADE13	Q05911	482 aa	Known RBP	4.57	□□□□□ -1.68
LSO1	YJR005C-A	RCL1	Q08096	367 aa	Predicted RBP	4.57	□□□□□ -1.68
LSO1	YJR005C-A	IMA2	Q08295	589 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	YLR053C	Q12026	108 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	SPE3	Q12074	293 aa	Known RBP	4.57	□□□□□ -1.68
LSO1	YJR005C-A	HOS1	Q12214	470 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	HRT3	Q12347	344 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	ARP7	Q12406	477 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	YOL087C	Q99247	1116 aa		4.57	□□□□□ -1.68
LSO1	YJR005C-A	TPK1	P06244	397 aa		4.56	□□□□□ -1.68
LSO1	YJR005C-A	ILS1	P09436	1072 aa	Known RBP	4.56	□□□□□ -1.68
LSO1	YJR005C-A	GPA2	P10823	449 aa		4.56	□□□□□ -1.68
LSO1	YJR005C-A	PRP16	P15938	1071 aa	Predicted RBP	4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms