RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W SRP54P20424 541 aaKnown RBP1.47□□□□□ -2.17
SMC1YFL008W PRE2P30656 287 aaKnown RBP1.47□□□□□ -2.17
SMC1YFL008W SDH8P38345 138 aa1.47□□□□□ -2.17
SMC1YFL008W PXA1P41909 870 aa1.47□□□□□ -2.17
SMC1YFL008W CTR1P49573 406 aa1.47□□□□□ -2.17
SMC1YFL008W IMO32P53219 342 aa1.47□□□□□ -2.17
SMC1YFL008W VPS30Q02948 557 aa1.47□□□□□ -2.17
SMC1YFL008W UFO1Q04511 668 aa1.47□□□□□ -2.17
SMC1YFL008W YDL242WQ07746 117 aa1.47□□□□□ -2.17
SMC1YFL008W ICL2Q12031 575 aa1.47□□□□□ -2.17
SMC1YFL008W CWC2Q12046 339 aaPredicted RBP1.47□□□□□ -2.17
SMC1YFL008W RPL7AP05737 244 aaKnown RBP1.47□□□□□ -2.17
SMC1YFL008W YFL068WP0CX99 160 aa1.47□□□□□ -2.17
SMC1YFL008W YLL066W-AP0CY00 160 aa1.47□□□□□ -2.17
SMC1YFL008W YLL067W-AP0CY01 160 aa1.47□□□□□ -2.17
SMC1YFL008W NCP1P16603 691 aaKnown RBP1.47□□□□□ -2.17
SMC1YFL008W MDM10P18409 493 aa1.47□□□□□ -2.17
SMC1YFL008W COX11P19516 300 aaKnown RBP1.47□□□□□ -2.17
SMC1YFL008W YCR061WP25639 631 aa1.47□□□□□ -2.17
SMC1YFL008W TFC4P33339 1025 aa1.47□□□□□ -2.17
SMC1YFL008W CUE2P36075 443 aaKnown RBP1.47□□□□□ -2.17
SMC1YFL008W BRN1P38170 754 aa1.47□□□□□ -2.17
SMC1YFL008W EXO84P38261 753 aa1.47□□□□□ -2.17
SMC1YFL008W TDA3P38758 523 aa1.47□□□□□ -2.17
SMC1YFL008W ARB1P40024 610 aaKnown RBP1.47□□□□□ -2.17
SMC1YFL008W RPL7BQ12213 244 aaKnown RBP1.47□□□□□ -2.17
SMC1YFL008W YNL162W-AQ3E7A8 72 aa1.47□□□□□ -2.17
SMC1YFL008W SES1P07284 462 aaKnown RBP1.46□□□□□ -2.18
SMC1YFL008W CAP1P28495 268 aaKnown RBP1.46□□□□□ -2.18
SMC1YFL008W YBR138CP38277 524 aa1.46□□□□□ -2.18
SMC1YFL008W STT3P39007 718 aaKnown RBP1.46□□□□□ -2.18
SMC1YFL008W SWD1P39706 426 aa1.46□□□□□ -2.18
SMC1YFL008W DAK1P54838 584 aaKnown RBP1.46□□□□□ -2.18
SMC1YFL008W YKU80Q04437 629 aa1.46□□□□□ -2.18
SMC1YFL008W RTT109Q07794 436 aa1.46□□□□□ -2.18
SMC1YFL008W SUL2Q12325 893 aa1.46□□□□□ -2.18
SMC1YFL008W SEC3P33332 1336 aaKnown RBP1.46□□□□□ -2.18
SMC1YFL008W GAL1P04385 528 aa1.46□□□□□ -2.18
SMC1YFL008W AAC1P04710 309 aa1.46□□□□□ -2.18
SMC1YFL008W CHO2P05374 869 aaKnown RBP1.46□□□□□ -2.18
SMC1YFL008W KIN82P25341 720 aa1.46□□□□□ -2.18
SMC1YFL008W LOS1P33418 1100 aaPredicted RBP1.46□□□□□ -2.18
SMC1YFL008W REV7P38927 245 aa1.46□□□□□ -2.18
SMC1YFL008W QRI7P43122 407 aa1.46□□□□□ -2.18
SMC1YFL008W TAM41P53230 385 aa1.46□□□□□ -2.18
SMC1YFL008W ARC35P53731 342 aaKnown RBP1.46□□□□□ -2.18
SMC1YFL008W YSH1Q06224 779 aaPredicted RBP1.46□□□□□ -2.18
SMC1YFL008W RNR3P21672 869 aaKnown RBP1.46□□□□□ -2.18
SMC1YFL008W SGV1P23293 657 aaKnown RBP1.46□□□□□ -2.18
SMC1YFL008W MRC1P25588 1096 aa1.46□□□□□ -2.18
SMC1YFL008W HIS7P33734 552 aaKnown RBP1.46□□□□□ -2.18
SMC1YFL008W KES1P35844 434 aaKnown RBP1.46□□□□□ -2.18
SMC1YFL008W STB5P38699 743 aa1.46□□□□□ -2.18
SMC1YFL008W YIL166CP40445 542 aa1.46□□□□□ -2.18
SMC1YFL008W PMT6P42934 759 aa1.46□□□□□ -2.18
SMC1YFL008W STU2P46675 888 aa1.46□□□□□ -2.18
SMC1YFL008W DAS1P47005 663 aa1.46□□□□□ -2.18
SMC1YFL008W SPC98P53540 846 aa1.46□□□□□ -2.18
SMC1YFL008W YMR210WQ03649 449 aa1.46□□□□□ -2.18
SMC1YFL008W IOC4Q04213 475 aa1.46□□□□□ -2.18
SMC1YFL008W VBA4Q04602 768 aaKnown RBP1.46□□□□□ -2.18
SMC1YFL008W ENT2Q05785 613 aa1.46□□□□□ -2.18
SMC1YFL008W HBT1Q07653 1046 aaKnown RBP1.46□□□□□ -2.18
SMC1YFL008W VPS5Q92331 675 aa1.46□□□□□ -2.18
SMC1YFL008W NUP157P40064 1391 aaKnown RBP1.45□□□□□ -2.18
SMC1YFL008W ERG20P08524 352 aaKnown RBP1.45□□□□□ -2.18
SMC1YFL008W TUB1P09733 447 aaKnown RBP1.45□□□□□ -2.18
SMC1YFL008W NGG1P32494 702 aa1.45□□□□□ -2.18
SMC1YFL008W UGP1P32861 499 aaKnown RBP1.45□□□□□ -2.18
SMC1YFL008W STL1P39932 569 aa1.45□□□□□ -2.18
SMC1YFL008W CIN1P40987 1014 aa1.45□□□□□ -2.18
SMC1YFL008W SPO1P53541 631 aa1.45□□□□□ -2.18
SMC1YFL008W CPR8P53728 308 aa1.45□□□□□ -2.18
SMC1YFL008W RSC9Q03124 581 aa1.45□□□□□ -2.18
SMC1YFL008W PEX15Q08215 383 aa1.45□□□□□ -2.18
SMC1YFL008W AI5_ALPHAQ9ZZX1 630 aa1.45□□□□□ -2.18
SMC1YFL008W FLO1P32768 1537 aa1.45□□□□□ -2.18
SMC1YFL008W AEP2P22136 580 aa1.45□□□□□ -2.18
SMC1YFL008W RRP43P25359 394 aaPredicted RBP1.45□□□□□ -2.18
SMC1YFL008W GDA1P32621 518 aa1.45□□□□□ -2.18
SMC1YFL008W ARG2P40360 574 aa1.45□□□□□ -2.18
SMC1YFL008W TIM44Q01852 431 aa1.45□□□□□ -2.18
SMC1YFL008W TRS31Q03337 283 aa1.45□□□□□ -2.18
SMC1YFL008W ULA1Q12059 462 aa1.45□□□□□ -2.18
SMC1YFL008W SSB1P11484 613 aaKnown RBP1.45□□□□□ -2.18
SMC1YFL008W YHL041WP38730 149 aa1.45□□□□□ -2.18
SMC1YFL008W DUN1P39009 513 aa1.45□□□□□ -2.18
SMC1YFL008W SSB2P40150 613 aaKnown RBP1.45□□□□□ -2.18
SMC1YFL008W RAD26P40352 1085 aa1.45□□□□□ -2.18
SMC1YFL008W NMD5P46970 1048 aa1.45□□□□□ -2.18
SMC1YFL008W TAX4P47030 604 aa1.45□□□□□ -2.18
SMC1YFL008W COQ6P53318 479 aa1.45□□□□□ -2.18
SMC1YFL008W YOL159CQ08300 171 aa1.45□□□□□ -2.18
SMC1YFL008W YML003WP0CF16 290 aa1.44□□□□□ -2.18
SMC1YFL008W PET309P32522 965 aaPredicted RBP1.44□□□□□ -2.18
SMC1YFL008W HOT13P36078 116 aa1.44□□□□□ -2.18
SMC1YFL008W PMC1P38929 1173 aaPredicted RBP1.44□□□□□ -2.18
SMC1YFL008W HLJ1P48353 224 aa1.44□□□□□ -2.18
SMC1YFL008W IMA1P53051 589 aa1.44□□□□□ -2.18
SMC1YFL008W SND1Q04007 877 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms