RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B CEF1Q03654 590 aaPredicted RBP0.64□□□□□ -2.31
SBH1YER087C-B SKY1Q03656 742 aa0.64□□□□□ -2.31
SBH1YER087C-B NSE5Q03718 556 aa0.64□□□□□ -2.31
SBH1YER087C-B PPN1Q04119 674 aa0.64□□□□□ -2.31
SBH1YER087C-B HLR1Q04429 423 aa0.64□□□□□ -2.31
SBH1YER087C-B TRI1Q05024 226 aa0.64□□□□□ -2.31
SBH1YER087C-B ARR3Q06598 404 aa0.64□□□□□ -2.31
SBH1YER087C-B GSH2Q08220 491 aa0.64□□□□□ -2.31
SBH1YER087C-B VHS3Q08438 674 aa0.64□□□□□ -2.31
SBH1YER087C-B NOP56Q12460 504 aaKnown RBP RIP-Chip data0.64□□□□□ -2.31not detected
SBH1YER087C-B ATP4P05626 244 aa0.63□□□□□ -2.31
SBH1YER087C-B RPS21AP0C0V8 87 aaKnown RBP0.63□□□□□ -2.31
SBH1YER087C-B YML002WP0CF17 737 aa0.63□□□□□ -2.31
SBH1YER087C-B SSB1P11484 613 aaKnown RBP0.63□□□□□ -2.31
SBH1YER087C-B BIK1P11709 440 aa0.63□□□□□ -2.31
SBH1YER087C-B CDC26P14724 124 aa0.63□□□□□ -2.31
SBH1YER087C-B AEP2P22136 580 aa0.63□□□□□ -2.31
SBH1YER087C-B SSD1P24276 1250 aaKnown RBP RIP-Chip data0.63□□□□□ -2.31not detected
SBH1YER087C-B CWH43P25618 953 aa0.63□□□□□ -2.31
SBH1YER087C-B YJU2P28320 278 aaPredicted RBP0.63□□□□□ -2.31
SBH1YER087C-B PRE4P30657 266 aa0.63□□□□□ -2.31
SBH1YER087C-B DGR2P32330 852 aa0.63□□□□□ -2.31
SBH1YER087C-B PRP19P32523 503 aaKnown RBP0.63□□□□□ -2.31
SBH1YER087C-B TOM20P35180 183 aa0.63□□□□□ -2.31
SBH1YER087C-B HES1P35843 434 aa0.63□□□□□ -2.31
SBH1YER087C-B RMA1P36001 430 aaKnown RBP0.63□□□□□ -2.31
SBH1YER087C-B YKR075CP36155 307 aa0.63□□□□□ -2.31
SBH1YER087C-B YPT10P38146 199 aa0.63□□□□□ -2.31
SBH1YER087C-B RKM3P38222 552 aa0.63□□□□□ -2.31
SBH1YER087C-B FAT1P38225 669 aa0.63□□□□□ -2.31
SBH1YER087C-B ENP1P38333 483 aaKnown RBP0.63□□□□□ -2.31
SBH1YER087C-B TDA3P38758 523 aa0.63□□□□□ -2.31
SBH1YER087C-B SSB2P40150 613 aaKnown RBP0.63□□□□□ -2.31
SBH1YER087C-B LRO1P40345 661 aa0.63□□□□□ -2.31
SBH1YER087C-B BUD8P41698 603 aa0.63□□□□□ -2.31
SBH1YER087C-B NIT2P47016 307 aa0.63□□□□□ -2.31
SBH1YER087C-B YDL183CP48569 320 aa0.63□□□□□ -2.31
SBH1YER087C-B TAF4P50105 388 aa0.63□□□□□ -2.31
SBH1YER087C-B SPC105P53148 917 aa0.63□□□□□ -2.31
SBH1YER087C-B PEF1P53238 335 aa0.63□□□□□ -2.31
SBH1YER087C-B PEX8P53248 589 aa0.63□□□□□ -2.31
SBH1YER087C-B CNM67P53865 581 aaKnown RBP0.63□□□□□ -2.31
SBH1YER087C-B NOP15P53927 220 aaPredicted RBP0.63□□□□□ -2.31
SBH1YER087C-B PTA1Q01329 785 aaPredicted RBP0.63□□□□□ -2.31
SBH1YER087C-B FDC1Q03034 503 aa0.63□□□□□ -2.31
SBH1YER087C-B USA1Q03714 838 aa0.63□□□□□ -2.31
SBH1YER087C-B VBA4Q04602 768 aaKnown RBP0.63□□□□□ -2.31
SBH1YER087C-B YLR407WQ06070 228 aa0.63□□□□□ -2.31
SBH1YER087C-B FAP7Q12055 197 aaPredicted RBP0.63□□□□□ -2.31
SBH1YER087C-B DIN7Q12086 430 aa0.63□□□□□ -2.31
SBH1YER087C-B RRP6Q12149 733 aaKnown RBP0.63□□□□□ -2.31
SBH1YER087C-B RPS21BQ3E754 87 aaKnown RBP0.63□□□□□ -2.31
SBH1YER087C-B CYB2P00175 591 aa0.62□□□□□ -2.31
SBH1YER087C-B RPS17AP02407 136 aaKnown RBP0.62□□□□□ -2.31
SBH1YER087C-B AAC1P04710 309 aa0.62□□□□□ -2.31
SBH1YER087C-B ILS1P09436 1072 aaKnown RBP0.62□□□□□ -2.31
SBH1YER087C-B RPS17BP14127 136 aaKnown RBP0.62□□□□□ -2.31
SBH1YER087C-B KGD2P19262 463 aaPredicted RBP0.62□□□□□ -2.31
SBH1YER087C-B COX11P19516 300 aaKnown RBP0.62□□□□□ -2.31
SBH1YER087C-B VPS33P20795 691 aa0.62□□□□□ -2.31
SBH1YER087C-B CBP3P21560 335 aa0.62□□□□□ -2.31
SBH1YER087C-B ATP12P22135 325 aa0.62□□□□□ -2.31
SBH1YER087C-B IMG2P25642 146 aaPredicted RBP0.62□□□□□ -2.31
SBH1YER087C-B CAP1P28495 268 aaKnown RBP0.62□□□□□ -2.31
SBH1YER087C-B PLC1P32383 869 aa0.62□□□□□ -2.31
SBH1YER087C-B PET309P32522 965 aaPredicted RBP0.62□□□□□ -2.31
SBH1YER087C-B MTC7P32633 139 aa0.62□□□□□ -2.31
SBH1YER087C-B DHR2P36009 735 aaPredicted RBP0.62□□□□□ -2.31
SBH1YER087C-B SDS22P36047 338 aa0.62□□□□□ -2.31
SBH1YER087C-B YLF2P38746 405 aa0.62□□□□□ -2.31
SBH1YER087C-B TOM71P38825 639 aaKnown RBP0.62□□□□□ -2.31
SBH1YER087C-B CRG1P38892 291 aaRIP-Chip data0.62□□□□□ -2.31not detected
SBH1YER087C-B RRP8P38961 392 aaKnown RBP0.62□□□□□ -2.31
SBH1YER087C-B YJL193WP39542 402 aa0.62□□□□□ -2.31
SBH1YER087C-B STL1P39932 569 aa0.62□□□□□ -2.31
SBH1YER087C-B YEN1P40028 759 aa0.62□□□□□ -2.31
SBH1YER087C-B FTR1P40088 404 aa0.62□□□□□ -2.31
SBH1YER087C-B PRM2P40534 656 aa0.62□□□□□ -2.31
SBH1YER087C-B VID28P40547 921 aa0.62□□□□□ -2.31
SBH1YER087C-B MAD2P40958 196 aa0.62□□□□□ -2.31
SBH1YER087C-B CIN1P40987 1014 aa0.62□□□□□ -2.31
SBH1YER087C-B YGR153WP48238 217 aa0.62□□□□□ -2.31
SBH1YER087C-B RNR4P49723 345 aaKnown RBP0.62□□□□□ -2.31
SBH1YER087C-B HOL1P53389 586 aa0.62□□□□□ -2.31
SBH1YER087C-B PAP2P53632 584 aaKnown RBP0.62□□□□□ -2.31
SBH1YER087C-B FOL1P53848 824 aa0.62□□□□□ -2.31
SBH1YER087C-B YNL144CP53907 740 aa0.62□□□□□ -2.31
SBH1YER087C-B COG6P53959 839 aa0.62□□□□□ -2.31
SBH1YER087C-B TGL2P54857 326 aa0.62□□□□□ -2.31
SBH1YER087C-B RCR2Q03446 210 aaKnown RBP0.62□□□□□ -2.31
SBH1YER087C-B YHM2Q04013 314 aa0.62□□□□□ -2.31
SBH1YER087C-B YPS7Q06325 596 aa0.62□□□□□ -2.31
SBH1YER087C-B NGL1Q08213 363 aaKnown RBP0.62□□□□□ -2.31
SBH1YER087C-B PEX15Q08215 383 aa0.62□□□□□ -2.31
SBH1YER087C-B TRE2Q08693 809 aa0.62□□□□□ -2.31
SBH1YER087C-B YOR378WQ08902 515 aa0.62□□□□□ -2.31
SBH1YER087C-B MRN1Q08925 612 aaKnown RBP RIP-Chip data0.62□□□□□ -2.31not detected
SBH1YER087C-B AIM41Q12032 185 aa0.62□□□□□ -2.31
SBH1YER087C-B SLX4Q12098 748 aa0.62□□□□□ -2.31
SBH1YER087C-B TMA17Q12513 150 aa0.62□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms