RNA–Protein interactions for RNA: YER081W

SER3, Transcript of 3-phosphoglycerate dehydrogenase, yeast

Gene SER3, Length 1,410 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SER3	YER081W	BIK1	P11709	440 aa		4.59	□□□□□ -1.67
SER3	YER081W	FSH1	P38777	243 aa	Known RBP	4.59	□□□□□ -1.67
SER3	YER081W	LNP1	P38878	278 aa		4.59	□□□□□ -1.67
SER3	YER081W	YEL020C	P39994	560 aa		4.59	□□□□□ -1.67
SER3	YER081W	SMK1	P41808	388 aa		4.59	□□□□□ -1.67
SER3	YER081W	YML119W	Q03208	357 aa		4.59	□□□□□ -1.67
SER3	YER081W	PCL8	Q08966	492 aa		4.59	□□□□□ -1.67
SER3	YER081W	RPN13	O13563	156 aa		4.58	□□□□□ -1.68
SER3	YER081W	PET122	P10355	254 aa		4.58	□□□□□ -1.68
SER3	YER081W	UBC1	P21734	215 aa	Known RBP	4.58	□□□□□ -1.68
SER3	YER081W	RPA135	P22138	1203 aa	Known RBP	4.58	□□□□□ -1.68
SER3	YER081W	SAT4	P25333	603 aa	Known RBP	4.58	□□□□□ -1.68
SER3	YER081W	PSY4	P38193	441 aa		4.58	□□□□□ -1.68
SER3	YER081W	IFA38	P38286	347 aa		4.58	□□□□□ -1.68
SER3	YER081W	YIL166C	P40445	542 aa		4.58	□□□□□ -1.68
SER3	YER081W	FAF1	P40546	346 aa	Predicted RBP	4.58	□□□□□ -1.68
SER3	YER081W	SNM1	P40993	198 aa		4.58	□□□□□ -1.68
SER3	YER081W	BST1	P43571	1029 aa		4.58	□□□□□ -1.68
SER3	YER081W	IML2	P47031	731 aa		4.58	□□□□□ -1.68
SER3	YER081W	YPL108W	Q02872	168 aa	Predicted RBP	4.58	□□□□□ -1.68
SER3	YER081W	ARG7	Q04728	441 aa		4.58	□□□□□ -1.68
SER3	YER081W	TFC6	Q06339	672 aa		4.58	□□□□□ -1.68
SER3	YER081W	CRT10	Q08226	957 aa		4.58	□□□□□ -1.68
SER3	YER081W	RPL7A	P05737	244 aa	Known RBP	4.57	□□□□□ -1.68
SER3	YER081W	AMD2	P22580	549 aa		4.57	□□□□□ -1.68
SER3	YER081W	SPO11	P23179	398 aa		4.57	□□□□□ -1.68
SER3	YER081W	YMC1	P32331	307 aa		4.57	□□□□□ -1.68
SER3	YER081W	GDA1	P32621	518 aa		4.57	□□□□□ -1.68
SER3	YER081W	XRS2	P33301	854 aa		4.57	□□□□□ -1.68
SER3	YER081W	YFL015C	P43578	164 aa		4.57	□□□□□ -1.68
SER3	YER081W	BNA1	P47096	177 aa		4.57	□□□□□ -1.68
SER3	YER081W	RRT6	P53117	311 aa	Predicted RBP	4.57	□□□□□ -1.68
SER3	YER081W	GFD1	Q04839	188 aa	Known RBP	4.57	□□□□□ -1.68
SER3	YER081W	RPL7B	Q12213	244 aa	Known RBP	4.57	□□□□□ -1.68
SER3	YER081W	SSM4	P40318	1319 aa		4.57	□□□□□ -1.68
SER3	YER081W	PMA2	P19657	947 aa		4.56	□□□□□ -1.68
SER3	YER081W	UGP1	P32861	499 aa	Known RBP	4.56	□□□□□ -1.68
SER3	YER081W	NPR3	P38742	1146 aa		4.56	□□□□□ -1.68
SER3	YER081W	VPS8	P39702	1274 aa		4.56	□□□□□ -1.68
SER3	YER081W	MRK1	P50873	501 aa		4.56	□□□□□ -1.68
SER3	YER081W	APM1	Q00776	475 aa	Predicted RBP	4.56	□□□□□ -1.68
SER3	YER081W	UBP16	Q02863	499 aa		4.56	□□□□□ -1.68
SER3	YER081W	WAR1	Q03631	944 aa		4.56	□□□□□ -1.68
SER3	YER081W	SSP2	Q08646	371 aa		4.56	□□□□□ -1.68
SER3	YER081W	ULA1	Q12059	462 aa		4.56	□□□□□ -1.68
SER3	YER081W	SEC3	P33332	1336 aa	Known RBP	4.55	□□□□□ -1.68
SER3	YER081W	ADY2	P25613	283 aa		4.55	□□□□□ -1.68
SER3	YER081W	MRPL9	P31334	269 aa		4.55	□□□□□ -1.68
SER3	YER081W	MRPL36	P36531	177 aa		4.55	□□□□□ -1.68
SER3	YER081W	MTG2	P38860	518 aa		4.55	□□□□□ -1.68
SER3	YER081W	ATF1	P40353	525 aa		4.55	□□□□□ -1.68
SER3	YER081W	ZAP1	P47043	880 aa		4.55	□□□□□ -1.68
SER3	YER081W	TMA64	Q04600	565 aa	Known RBP	4.55	□□□□□ -1.68
SER3	YER081W	STP3	Q05937	343 aa		4.55	□□□□□ -1.68
SER3	YER081W	CSR1	Q06705	408 aa	Known RBP	4.55	□□□□□ -1.68
SER3	YER081W	PCD1	Q12524	340 aa		4.55	□□□□□ -1.68
SER3	YER081W	PNO1	Q99216	274 aa	Known RBP	4.55	□□□□□ -1.68
SER3	YER081W	Q0010	Q9ZZX9	128 aa		4.55	□□□□□ -1.68
SER3	YER081W	CHO2	P05374	869 aa	Known RBP	4.55	□□□□□ -1.68
SER3	YER081W	PDE1	P22434	369 aa		4.55	□□□□□ -1.68
SER3	YER081W	AAD3	P25612	363 aa		4.55	□□□□□ -1.68
SER3	YER081W	ERP2	P39704	215 aa		4.55	□□□□□ -1.68
SER3	YER081W	MAM1	P40065	302 aa		4.55	□□□□□ -1.68
SER3	YER081W	SVL3	Q03088	825 aa	Known RBP	4.55	□□□□□ -1.68
SER3	YER081W	YDL242W	Q07746	117 aa		4.55	□□□□□ -1.68
SER3	YER081W	YBR255C-A	Q3E776	120 aa		4.55	□□□□□ -1.68
SER3	YER081W	SNF1	P06782	633 aa	Known RBP	4.54	□□□□□ -1.68
SER3	YER081W	ADE5,7	P07244	802 aa	Known RBP	4.54	□□□□□ -1.68
SER3	YER081W	KGD2	P19262	463 aa	Predicted RBP	4.54	□□□□□ -1.68
SER3	YER081W	URK1	P27515	501 aa		4.54	□□□□□ -1.68
SER3	YER081W	SWC3	P31376	625 aa		4.54	□□□□□ -1.68
SER3	YER081W	PPZ2	P33329	710 aa		4.54	□□□□□ -1.68
SER3	YER081W	MPE1	P35728	441 aa	Known RBP	4.54	□□□□□ -1.68
SER3	YER081W	CTF18	P49956	741 aa		4.54	□□□□□ -1.68
SER3	YER081W	COG2	P53271	262 aa		4.54	□□□□□ -1.68
SER3	YER081W	GIR2	Q03768	265 aa	Predicted RBP	4.54	□□□□□ -1.68
SER3	YER081W	RAD33	Q04231	177 aa		4.54	□□□□□ -1.68
SER3	YER081W	YML053C	Q04978	212 aa		4.54	□□□□□ -1.68
SER3	YER081W	VID22	Q05934	901 aa		4.54	□□□□□ -1.68
SER3	YER081W	VAM6	Q07468	1049 aa		4.54	□□□□□ -1.68
SER3	YER081W	LCB4	Q12246	624 aa		4.54	□□□□□ -1.68
SER3	YER081W	COX17	Q12287	69 aa		4.54	□□□□□ -1.68
SER3	YER081W	AHA1	Q12449	350 aa	Known RBP	4.54	□□□□□ -1.68
SER3	YER081W	RRP43	P25359	394 aa	Predicted RBP	4.53	□□□□□ -1.68
SER3	YER081W	RAD16	P31244	790 aa		4.53	□□□□□ -1.68
SER3	YER081W	SSH4	P32343	579 aa		4.53	□□□□□ -1.68
SER3	YER081W	GCD7	P32502	381 aa	Predicted RBP	4.53	□□□□□ -1.68
SER3	YER081W	TOA1	P32773	286 aa		4.53	□□□□□ -1.68
SER3	YER081W	PAC2	P39937	518 aa		4.53	□□□□□ -1.68
SER3	YER081W	RAD26	P40352	1085 aa		4.53	□□□□□ -1.68
SER3	YER081W	LAS21	P40367	830 aa		4.53	□□□□□ -1.68
SER3	YER081W	SKP2	P42843	763 aa		4.53	□□□□□ -1.68
SER3	YER081W	IMO32	P53219	342 aa		4.53	□□□□□ -1.68
SER3	YER081W	YGR079W	P53249	370 aa		4.53	□□□□□ -1.68
SER3	YER081W	TRM8	Q12009	286 aa		4.53	□□□□□ -1.68
SER3	YER081W	BNR1	P40450	1375 aa		4.52	□□□□□ -1.69
SER3	YER081W	TPK1	P06244	397 aa		4.52	□□□□□ -1.69
SER3	YER081W	HEM1	P09950	548 aa	Predicted RBP	4.52	□□□□□ -1.69
SER3	YER081W	GUK1	P15454	187 aa	Known RBP	4.52	□□□□□ -1.69
SER3	YER081W	SLC1	P33333	303 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms