RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	RPN3	P40016	523 aa	Known RBP	4.27	□□□□□ -1.73
TPA1	YER049W	ALR2	P43553	858 aa		4.27	□□□□□ -1.73
TPA1	YER049W	SAE2	P46946	345 aa		4.27	□□□□□ -1.73
TPA1	YER049W	LIA1	P47120	325 aa	Known RBP	4.27	□□□□□ -1.73
TPA1	YER049W	MIG2	P53035	382 aa		4.27	□□□□□ -1.73
TPA1	YER049W	RTA1	P53047	317 aa		4.27	□□□□□ -1.73
TPA1	YER049W	SOL4	P53315	255 aa		4.27	□□□□□ -1.73
TPA1	YER049W	COG6	P53959	839 aa		4.27	□□□□□ -1.73
TPA1	YER049W	INP2	Q03824	705 aa		4.27	□□□□□ -1.73
TPA1	YER049W	HMO1	Q03973	246 aa	Known RBP	4.27	□□□□□ -1.73
TPA1	YER049W	PHM6	Q05637	104 aa		4.27	□□□□□ -1.73
TPA1	YER049W	VHS3	Q08438	674 aa		4.27	□□□□□ -1.73
TPA1	YER049W	SLX4	Q12098	748 aa		4.27	□□□□□ -1.73
TPA1	YER049W	RRD2	Q12461	358 aa		4.27	□□□□□ -1.73
TPA1	YER049W	TRM11	Q12463	433 aa		4.27	□□□□□ -1.73
TPA1	YER049W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
TPA1	YER049W	CMD1	P06787	147 aa	Known RBP	4.27	□□□□□ -1.73
TPA1	YER049W	ADE2	P21264	571 aa	Known RBP	4.27	□□□□□ -1.73
TPA1	YER049W	ADP1	P25371	1049 aa		4.27	□□□□□ -1.73
TPA1	YER049W	KAR4	P25583	335 aa		4.27	□□□□□ -1.73
TPA1	YER049W	HBS1	P32769	611 aa	Known RBP	4.27	□□□□□ -1.73
TPA1	YER049W	CSG2	P35206	410 aa		4.27	□□□□□ -1.73
TPA1	YER049W	BET3	P36149	193 aa		4.27	□□□□□ -1.73
TPA1	YER049W	ERT1	P38140	529 aa		4.27	□□□□□ -1.73
TPA1	YER049W	YBL028C	P38202	106 aa		4.27	□□□□□ -1.73
TPA1	YER049W	PCA1	P38360	1216 aa		4.27	□□□□□ -1.73
TPA1	YER049W	GPB2	P39717	880 aa		4.27	□□□□□ -1.73
TPA1	YER049W	PUS2	P53167	370 aa		4.27	□□□□□ -1.73
TPA1	YER049W	COS6	P53344	381 aa		4.27	□□□□□ -1.73
TPA1	YER049W	OSH6	Q02201	448 aa		4.27	□□□□□ -1.73
TPA1	YER049W	YLR257W	Q06146	321 aa	Known RBP	4.27	□□□□□ -1.73
TPA1	YER049W	TRE1	Q08919	783 aa		4.27	□□□□□ -1.73
TPA1	YER049W	YLR125W	Q12138	136 aa		4.27	□□□□□ -1.73
TPA1	YER049W	RRG1	Q12167	365 aa	Predicted RBP	4.27	□□□□□ -1.73
TPA1	YER049W	TAF3	Q12297	353 aa		4.27	□□□□□ -1.73
TPA1	YER049W	GPM3	Q12326	303 aa		4.27	□□□□□ -1.73
TPA1	YER049W	NOT5	Q12514	560 aa	Predicted RBP	4.27	□□□□□ -1.73
TPA1	YER049W	BI2	P03873	423 aa		4.26	□□□□□ -1.73
TPA1	YER049W	BI4	P03879	638 aa		4.26	□□□□□ -1.73
TPA1	YER049W	ILS1	P09436	1072 aa	Known RBP	4.26	□□□□□ -1.73
TPA1	YER049W	CDC42	P19073	191 aa		4.26	□□□□□ -1.73
TPA1	YER049W	RNR1	P21524	888 aa	Known RBP	4.26	□□□□□ -1.73
TPA1	YER049W	DAL2	P25335	343 aa		4.26	□□□□□ -1.73
TPA1	YER049W	NFS1	P25374	497 aa		4.26	□□□□□ -1.73
TPA1	YER049W	MUD1	P32605	298 aa	Known RBP	4.26	□□□□□ -1.73
TPA1	YER049W	DEF1	P35732	738 aa	Known RBP	4.26	□□□□□ -1.73
TPA1	YER049W	GPT2	P36148	743 aa		4.26	□□□□□ -1.73
TPA1	YER049W	MSR1	P38714	643 aa		4.26	□□□□□ -1.73
TPA1	YER049W	HSE1	P38753	452 aa		4.26	□□□□□ -1.73
TPA1	YER049W	NMD3	P38861	518 aa	Known RBP	4.26	□□□□□ -1.73
TPA1	YER049W	SCS2	P40075	244 aa	Known RBP	4.26	□□□□□ -1.73
TPA1	YER049W	YJL107C	P42947	387 aa		4.26	□□□□□ -1.73
TPA1	YER049W	CTR1	P49573	406 aa		4.26	□□□□□ -1.73
TPA1	YER049W	PAN2	P53010	1115 aa	Predicted RBP	4.26	□□□□□ -1.73
TPA1	YER049W	MTC3	P53077	123 aa		4.26	□□□□□ -1.73
TPA1	YER049W	MCM6	P53091	1017 aa	Known RBP	4.26	□□□□□ -1.73
TPA1	YER049W	USE1	P53146	245 aa		4.26	□□□□□ -1.73
TPA1	YER049W	TAM41	P53230	385 aa		4.26	□□□□□ -1.73
TPA1	YER049W	YNR014W	P53719	212 aa		4.26	□□□□□ -1.73
TPA1	YER049W	KTR5	P53966	522 aa	Predicted RBP	4.26	□□□□□ -1.73
TPA1	YER049W	SLT2	Q00772	484 aa		4.26	□□□□□ -1.73
TPA1	YER049W	FAP7	Q12055	197 aa	Predicted RBP	4.26	□□□□□ -1.73
TPA1	YER049W	BI3	Q9ZZW7	517 aa		4.26	□□□□□ -1.73
TPA1	YER049W	DBP2	P24783	546 aa	Known RBP	4.25	□□□□□ -1.73
TPA1	YER049W	MGT1	P26188	188 aa		4.25	□□□□□ -1.73
TPA1	YER049W	VPH2	P32341	215 aa		4.25	□□□□□ -1.73
TPA1	YER049W	SMY2	P32909	740 aa	Known RBP	4.25	□□□□□ -1.73
TPA1	YER049W	AST1	P35183	429 aa		4.25	□□□□□ -1.73
TPA1	YER049W	TSC10	P38342	320 aa		4.25	□□□□□ -1.73
TPA1	YER049W	GGA2	P38817	585 aa	Known RBP	4.25	□□□□□ -1.73
TPA1	YER049W	TDA11	P38854	504 aa		4.25	□□□□□ -1.73
TPA1	YER049W	PNT1	P38969	423 aa		4.25	□□□□□ -1.73
TPA1	YER049W	ARG2	P40360	574 aa		4.25	□□□□□ -1.73
TPA1	YER049W	AIM21	P40563	679 aa		4.25	□□□□□ -1.73
TPA1	YER049W	GCN20	P43535	752 aa	Known RBP	4.25	□□□□□ -1.73
TPA1	YER049W	YFL066C	P43538	392 aa		4.25	□□□□□ -1.73
TPA1	YER049W	FMP33	P46998	180 aa		4.25	□□□□□ -1.73
TPA1	YER049W	YJL045W	P47052	634 aa		4.25	□□□□□ -1.73
TPA1	YER049W	CPR7	P47103	393 aa		4.25	□□□□□ -1.73
TPA1	YER049W	YML6	P51998	286 aa		4.25	□□□□□ -1.73
TPA1	YER049W	LIF1	P53150	421 aa		4.25	□□□□□ -1.73
TPA1	YER049W	BUD9	P53226	547 aa		4.25	□□□□□ -1.73
TPA1	YER049W	NOG2	P53742	486 aa	Known RBP	4.25	□□□□□ -1.73
TPA1	YER049W	RPA49	Q01080	415 aa	Predicted RBP	4.25	□□□□□ -1.73
TPA1	YER049W	PRM6	Q04705	352 aa		4.25	□□□□□ -1.73
TPA1	YER049W	IVY1	Q04934	453 aa		4.25	□□□□□ -1.73
TPA1	YER049W	SNX3	Q08826	162 aa	Known RBP	4.25	□□□□□ -1.73
TPA1	YER049W	YDR018C	Q12185	396 aa		4.25	□□□□□ -1.73
TPA1	YER049W	MOT1	P32333	1867 aa		4.25	□□□□□ -1.73
TPA1	YER049W	TUB2	P02557	457 aa	Known RBP	4.25	□□□□□ -1.73
TPA1	YER049W	AI1	P03875	834 aa		4.25	□□□□□ -1.73
TPA1	YER049W	RPL24A	P04449	155 aa	Known RBP	4.25	□□□□□ -1.73
TPA1	YER049W	RPL11A	P0C0W9	174 aa	Known RBP	4.25	□□□□□ -1.73
TPA1	YER049W	TYR1	P20049	452 aa		4.25	□□□□□ -1.73
TPA1	YER049W	URA4	P20051	364 aa		4.25	□□□□□ -1.73
TPA1	YER049W	CBF2	P32504	956 aa		4.25	□□□□□ -1.73
TPA1	YER049W	TMT1	P32643	299 aa		4.25	□□□□□ -1.73
TPA1	YER049W	SEC6	P32844	805 aa		4.25	□□□□□ -1.73
TPA1	YER049W	NNK1	P36003	928 aa		4.25	□□□□□ -1.73
TPA1	YER049W	SMF2	P38778	549 aa		4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms