RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C PEX8P53248 589 aa3.03□□□□□ -1.92
SMB1YER029C RAD34Q06665 692 aa3.03□□□□□ -1.92
SMB1YER029C IRC3Q06683 689 aa3.03□□□□□ -1.92
SMB1YER029C PRS5Q12265 496 aaKnown RBP3.03□□□□□ -1.92
SMB1YER029C ARP7Q12406 477 aa3.03□□□□□ -1.92
SMB1YER029C KGD2P19262 463 aaPredicted RBP3.02□□□□□ -1.93
SMB1YER029C RPS7AP26786 190 aaKnown RBP3.02□□□□□ -1.93
SMB1YER029C RRP8P38961 392 aaKnown RBP3.02□□□□□ -1.93
SMB1YER029C CCT4P39078 528 aaKnown RBP3.02□□□□□ -1.93
SMB1YER029C SAW1P39735 261 aa3.02□□□□□ -1.93
SMB1YER029C ARB1P40024 610 aaKnown RBP3.02□□□□□ -1.93
SMB1YER029C RAD26P40352 1085 aa3.02□□□□□ -1.93
SMB1YER029C IDS2P46958 469 aa3.02□□□□□ -1.93
SMB1YER029C ASK10P48361 1146 aa3.02□□□□□ -1.93
SMB1YER029C UBP16Q02863 499 aa3.02□□□□□ -1.93
SMB1YER029C SND1Q04007 877 aa3.02□□□□□ -1.93
SMB1YER029C AAD4Q07747 329 aa3.02□□□□□ -1.93
SMB1YER029C MPD2Q99316 277 aa3.02□□□□□ -1.93
SMB1YER029C CET1O13297 549 aaPredicted RBP3.01□□□□□ -1.93
SMB1YER029C YPT1P01123 206 aaKnown RBP3.01□□□□□ -1.93
SMB1YER029C SDS22P36047 338 aa3.01□□□□□ -1.93
SMB1YER029C SAP1P39955 897 aaKnown RBP3.01□□□□□ -1.93
SMB1YER029C MAM1P40065 302 aa3.01□□□□□ -1.93
SMB1YER029C VFA1P40080 203 aa3.01□□□□□ -1.93
SMB1YER029C COG2P53271 262 aa3.01□□□□□ -1.93
SMB1YER029C EIS1Q05050 843 aaKnown RBP3.01□□□□□ -1.93
SMB1YER029C BRE1Q07457 700 aaKnown RBP3.01□□□□□ -1.93
SMB1YER029C CRD1Q07560 283 aa3.01□□□□□ -1.93
SMB1YER029C YDL242WQ07746 117 aa3.01□□□□□ -1.93
SMB1YER029C LYS21Q12122 440 aaKnown RBP3.01□□□□□ -1.93
SMB1YER029C YER175W-AQ8TGU4 54 aa3.01□□□□□ -1.93
SMB1YER029C PNO1Q99216 274 aaKnown RBP3.01□□□□□ -1.93
SMB1YER029C RTC1Q08281 1341 aa3□□□□□ -1.93
SMB1YER029C SES1P07284 462 aaKnown RBP3□□□□□ -1.93
SMB1YER029C KES1P35844 434 aaKnown RBP3□□□□□ -1.93
SMB1YER029C TAF5P38129 798 aa3□□□□□ -1.93
SMB1YER029C FTH1P38310 465 aa3□□□□□ -1.93
SMB1YER029C IMD2P38697 523 aaKnown RBP3□□□□□ -1.93
SMB1YER029C ERC1P38767 581 aa3□□□□□ -1.93
SMB1YER029C LAS21P40367 830 aa3□□□□□ -1.93
SMB1YER029C UBP7P40453 1071 aa3□□□□□ -1.93
SMB1YER029C SNO3P43544 222 aa3□□□□□ -1.93
SMB1YER029C ATG36P46983 293 aa3□□□□□ -1.93
SMB1YER029C MAD3P47074 515 aa3□□□□□ -1.93
SMB1YER029C IMD3P50095 523 aaKnown RBP3□□□□□ -1.93
SMB1YER029C ESF2P53743 316 aaKnown RBP3□□□□□ -1.93
SMB1YER029C IDP3P53982 420 aaKnown RBP3□□□□□ -1.93
SMB1YER029C ERG13P54839 491 aaKnown RBP3□□□□□ -1.93
SMB1YER029C AIM6Q07716 390 aa3□□□□□ -1.93
SMB1YER029C YMR085WP0CF18 432 aa2.99□□□□□ -1.93
SMB1YER029C MCM3P24279 971 aaKnown RBP2.99□□□□□ -1.93
SMB1YER029C NIC96P34077 839 aa2.99□□□□□ -1.93
SMB1YER029C STT3P39007 718 aaKnown RBP2.99□□□□□ -1.93
SMB1YER029C PLM2Q04383 521 aa2.99□□□□□ -1.93
SMB1YER029C CRF1Q04930 467 aa2.99□□□□□ -1.93
SMB1YER029C YML053CQ04978 212 aa2.99□□□□□ -1.93
SMB1YER029C CRC1Q12289 327 aa2.99□□□□□ -1.93
SMB1YER029C YOL114CQ12322 202 aa2.99□□□□□ -1.93
SMB1YER029C TMA7Q3E764 64 aaKnown RBP2.99□□□□□ -1.93
SMB1YER029C YER190C-BP0CX94 160 aa2.98□□□□□ -1.93
SMB1YER029C YEL077W-AP0CX95 160 aa2.98□□□□□ -1.93
SMB1YER029C YGR296C-BP0CX96 160 aa2.98□□□□□ -1.93
SMB1YER029C YPL283W-BP0CX97 160 aa2.98□□□□□ -1.93
SMB1YER029C YPR204C-AP0CX98 160 aa2.98□□□□□ -1.93
SMB1YER029C SST2P11972 698 aaKnown RBP2.98□□□□□ -1.93
SMB1YER029C YAP1P19880 650 aaKnown RBP2.98□□□□□ -1.93
SMB1YER029C SIR1P21691 654 aa2.98□□□□□ -1.93
SMB1YER029C MTG2P38860 518 aa2.98□□□□□ -1.93
SMB1YER029C ERV46P39727 415 aa2.98□□□□□ -1.93
SMB1YER029C CIN1P40987 1014 aa2.98□□□□□ -1.93
SMB1YER029C MAF1P41910 395 aa2.98□□□□□ -1.93
SMB1YER029C CIR1P42940 261 aa2.98□□□□□ -1.93
SMB1YER029C SCW4P53334 386 aaKnown RBP2.98□□□□□ -1.93
SMB1YER029C MOT3P54785 490 aaKnown RBP2.98□□□□□ -1.93
SMB1YER029C MET14Q02196 202 aa2.98□□□□□ -1.93
SMB1YER029C YPL071CQ02864 156 aa2.98□□□□□ -1.93
SMB1YER029C VPS64Q03944 604 aa2.98□□□□□ -1.93
SMB1YER029C ARA2Q04212 335 aa2.98□□□□□ -1.93
SMB1YER029C TPO3Q06451 622 aa2.98□□□□□ -1.93
SMB1YER029C ICL2Q12031 575 aa2.98□□□□□ -1.93
SMB1YER029C YBR255C-AQ3E776 120 aa2.98□□□□□ -1.93
SMB1YER029C MSS18P08593 268 aa2.97□□□□□ -1.93
SMB1YER029C URE2P23202 354 aaKnown RBP2.97□□□□□ -1.93
SMB1YER029C GSH1P32477 678 aa2.97□□□□□ -1.93
SMB1YER029C PXL1P36166 706 aa2.97□□□□□ -1.93
SMB1YER029C SPC72P39723 622 aa2.97□□□□□ -1.93
SMB1YER029C NOP2P40991 618 aaKnown RBP2.97□□□□□ -1.93
SMB1YER029C QRI7P43122 407 aa2.97□□□□□ -1.93
SMB1YER029C COP1P53622 1201 aaKnown RBP2.97□□□□□ -1.93
SMB1YER029C GET3Q12154 354 aaKnown RBP2.97□□□□□ -1.93
SMB1YER029C GAL4P04386 881 aa2.96□□□□□ -1.94
SMB1YER029C CTT1P06115 562 aa2.96□□□□□ -1.94
SMB1YER029C SWI4P25302 1093 aaKnown RBP2.96□□□□□ -1.94
SMB1YER029C TOM20P35180 183 aa2.96□□□□□ -1.94
SMB1YER029C VBA2P38358 474 aaKnown RBP2.96□□□□□ -1.94
SMB1YER029C CDC1P40986 491 aa2.96□□□□□ -1.94
SMB1YER029C TAM41P53230 385 aa2.96□□□□□ -1.94
SMB1YER029C YPL191CQ08930 360 aa2.96□□□□□ -1.94
SMB1YER029C BI2P03873 423 aa2.95□□□□□ -1.94
SMB1YER029C GAL1P04385 528 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 80.9 ms