RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	MAM1	P40065	302 aa		5.25	□□□□□ -1.57
NSE3	YDR288W	IML2	P47031	731 aa		5.25	□□□□□ -1.57
NSE3	YDR288W	TRS130	Q03660	1102 aa		5.25	□□□□□ -1.57
NSE3	YDR288W	ECM16	Q04217	1267 aa	Known RBP	5.25	□□□□□ -1.57
NSE3	YDR288W	RPL7A	P05737	244 aa	Known RBP	5.24	□□□□□ -1.57
NSE3	YDR288W	PET122	P10355	254 aa		5.24	□□□□□ -1.57
NSE3	YDR288W	PDE1	P22434	369 aa		5.24	□□□□□ -1.57
NSE3	YDR288W	AAD3	P25612	363 aa		5.24	□□□□□ -1.57
NSE3	YDR288W	RAD16	P31244	790 aa		5.24	□□□□□ -1.57
NSE3	YDR288W	YMC1	P32331	307 aa		5.24	□□□□□ -1.57
NSE3	YDR288W	SIP1	P32578	815 aa		5.24	□□□□□ -1.57
NSE3	YDR288W	OPT1	P40897	799 aa		5.24	□□□□□ -1.57
NSE3	YDR288W	IMA1	P53051	589 aa		5.24	□□□□□ -1.57
NSE3	YDR288W	UBP16	Q02863	499 aa		5.24	□□□□□ -1.57
NSE3	YDR288W	RPL7B	Q12213	244 aa	Known RBP	5.24	□□□□□ -1.57
NSE3	YDR288W	AHA1	Q12449	350 aa	Known RBP	5.24	□□□□□ -1.57
NSE3	YDR288W	YMR084W	A2P2R3	262 aa		5.23	□□□□□ -1.57
NSE3	YDR288W	HEM1	P09950	548 aa	Predicted RBP	5.23	□□□□□ -1.57
NSE3	YDR288W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	not detected
NSE3	YDR288W	YCL049C	P25577	312 aa		5.23	□□□□□ -1.57
NSE3	YDR288W	ADY2	P25613	283 aa		5.23	□□□□□ -1.57
NSE3	YDR288W	XRS2	P33301	854 aa		5.23	□□□□□ -1.57
NSE3	YDR288W	NUP120	P35729	1037 aa		5.23	□□□□□ -1.57
NSE3	YDR288W	YBR138C	P38277	524 aa		5.23	□□□□□ -1.57
NSE3	YDR288W	ARO9	P38840	513 aa	Predicted RBP	5.23	□□□□□ -1.57
NSE3	YDR288W	PAC2	P39937	518 aa		5.23	□□□□□ -1.57
NSE3	YDR288W	ZAP1	P47043	880 aa		5.23	□□□□□ -1.57
NSE3	YDR288W	COG2	P53271	262 aa		5.23	□□□□□ -1.57
NSE3	YDR288W	ARG7	Q04728	441 aa		5.23	□□□□□ -1.57
NSE3	YDR288W	CIA1	Q05583	330 aa		5.23	□□□□□ -1.57
NSE3	YDR288W	TOP1	P04786	769 aa		5.22	□□□□□ -1.57
NSE3	YDR288W	NCP1	P16603	691 aa	Known RBP	5.22	□□□□□ -1.57
NSE3	YDR288W	PMA2	P19657	947 aa		5.22	□□□□□ -1.57
NSE3	YDR288W	ILV6	P25605	309 aa	Known RBP	5.22	□□□□□ -1.57
NSE3	YDR288W	PSY4	P38193	441 aa		5.22	□□□□□ -1.57
NSE3	YDR288W	NPR3	P38742	1146 aa		5.22	□□□□□ -1.57
NSE3	YDR288W	UME6	P39001	836 aa		5.22	□□□□□ -1.57
NSE3	YDR288W	YFL015C	P43578	164 aa		5.22	□□□□□ -1.57
NSE3	YDR288W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.22	□□□□□ -1.57	RIP-Chip
NSE3	YDR288W	TUB1	P09733	447 aa	Known RBP	5.21	□□□□□ -1.58
NSE3	YDR288W	BEM3	P32873	1128 aa		5.21	□□□□□ -1.58
NSE3	YDR288W	RPF2	P36160	344 aa	Known RBP	5.21	□□□□□ -1.58
NSE3	YDR288W	RIX1	P38883	763 aa	Predicted RBP	5.21	□□□□□ -1.58
NSE3	YDR288W	YJL043W	P47053	257 aa		5.21	□□□□□ -1.58
NSE3	YDR288W	ARC35	P53731	342 aa	Known RBP	5.21	□□□□□ -1.58
NSE3	YDR288W	GTR1	Q00582	310 aa		5.21	□□□□□ -1.58
NSE3	YDR288W	YML119W	Q03208	357 aa		5.21	□□□□□ -1.58
NSE3	YDR288W	SUL2	Q12325	893 aa		5.21	□□□□□ -1.58
NSE3	YDR288W	RVB2	Q12464	471 aa	Known RBP	5.21	□□□□□ -1.58
NSE3	YDR288W	GDA1	P32621	518 aa		5.2	□□□□□ -1.58
NSE3	YDR288W	RPC34	P32910	317 aa		5.2	□□□□□ -1.58
NSE3	YDR288W	EXO84	P38261	753 aa		5.2	□□□□□ -1.58
NSE3	YDR288W	FUN12	P39730	1002 aa	Known RBP	5.2	□□□□□ -1.58
NSE3	YDR288W	BST1	P43571	1029 aa		5.2	□□□□□ -1.58
NSE3	YDR288W	MTG1	Q03151	367 aa	Predicted RBP	5.2	□□□□□ -1.58
NSE3	YDR288W	YML053C	Q04978	212 aa		5.2	□□□□□ -1.58
NSE3	YDR288W	ARO10	Q06408	635 aa		5.2	□□□□□ -1.58
NSE3	YDR288W	YBR255C-A	Q3E776	120 aa		5.2	□□□□□ -1.58
NSE3	YDR288W	PNO1	Q99216	274 aa	Known RBP	5.2	□□□□□ -1.58
NSE3	YDR288W	CHO2	P05374	869 aa	Known RBP	5.19	□□□□□ -1.58
NSE3	YDR288W	TPK1	P06244	397 aa		5.19	□□□□□ -1.58
NSE3	YDR288W	MTF2	P10849	440 aa		5.19	□□□□□ -1.58
NSE3	YDR288W	BIK1	P11709	440 aa		5.19	□□□□□ -1.58
NSE3	YDR288W	UBC1	P21734	215 aa	Known RBP	5.19	□□□□□ -1.58
NSE3	YDR288W	AMD2	P22580	549 aa		5.19	□□□□□ -1.58
NSE3	YDR288W	RAD26	P40352	1085 aa		5.19	□□□□□ -1.58
NSE3	YDR288W	UBX6	P47049	396 aa		5.19	□□□□□ -1.58
NSE3	YDR288W	CSR1	Q06705	408 aa	Known RBP	5.19	□□□□□ -1.58
NSE3	YDR288W	YDL242W	Q07746	117 aa		5.19	□□□□□ -1.58
NSE3	YDR288W	PCL8	Q08966	492 aa		5.19	□□□□□ -1.58
NSE3	YDR288W	COX17	Q12287	69 aa		5.19	□□□□□ -1.58
NSE3	YDR288W	SEC3	P33332	1336 aa	Known RBP	5.19	□□□□□ -1.58
NSE3	YDR288W	BI2	P03873	423 aa		5.18	□□□□□ -1.58
NSE3	YDR288W	KGD2	P19262	463 aa	Predicted RBP	5.18	□□□□□ -1.58
NSE3	YDR288W	RPT3	P33298	428 aa	Known RBP	5.18	□□□□□ -1.58
NSE3	YDR288W	SLC1	P33333	303 aa		5.18	□□□□□ -1.58
NSE3	YDR288W	EXO1	P39875	702 aa		5.18	□□□□□ -1.58
NSE3	YDR288W	YNL092W	P53934	400 aa		5.18	□□□□□ -1.58
NSE3	YDR288W	YML131W	Q03102	365 aa		5.18	□□□□□ -1.58
NSE3	YDR288W	PLM2	Q04383	521 aa		5.18	□□□□□ -1.58
NSE3	YDR288W	ATP2	P00830	511 aa	Known RBP	5.17	□□□□□ -1.58
NSE3	YDR288W	SSH4	P32343	579 aa		5.17	□□□□□ -1.58
NSE3	YDR288W	TEF4	P36008	412 aa	Known RBP	5.17	□□□□□ -1.58
NSE3	YDR288W	KAP123	P40069	1113 aa	Known RBP	5.17	□□□□□ -1.58
NSE3	YDR288W	TAM41	P53230	385 aa		5.17	□□□□□ -1.58
NSE3	YDR288W	YNL058C	P53947	316 aa		5.17	□□□□□ -1.58
NSE3	YDR288W	RAD33	Q04231	177 aa		5.17	□□□□□ -1.58
NSE3	YDR288W	AI5_ALPHA	Q9ZZX1	630 aa		5.17	□□□□□ -1.58
NSE3	YDR288W	BNR1	P40450	1375 aa		5.16	□□□□□ -1.58
NSE3	YDR288W	LEU2	P04173	364 aa	Predicted RBP	5.16	□□□□□ -1.58
NSE3	YDR288W	URK1	P27515	501 aa		5.16	□□□□□ -1.58
NSE3	YDR288W	PEX2	P32800	271 aa		5.16	□□□□□ -1.58
NSE3	YDR288W	CNS1	P33313	385 aa		5.16	□□□□□ -1.58
NSE3	YDR288W	IFA38	P38286	347 aa		5.16	□□□□□ -1.58
NSE3	YDR288W	SAP1	P39955	897 aa	Known RBP	5.16	□□□□□ -1.58
NSE3	YDR288W	YIL161W	P40449	235 aa	Known RBP	5.16	□□□□□ -1.58
NSE3	YDR288W	YMR018W	Q04364	514 aa		5.16	□□□□□ -1.58
NSE3	YDR288W	LCB4	Q12246	624 aa		5.16	□□□□□ -1.58
NSE3	YDR288W	AQY1	P0CD91	305 aa		5.15	□□□□□ -1.59
NSE3	YDR288W	TDA10	P42938	290 aa		5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 72.4 ms