RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	MRPL4	P36517	319 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	YBR287W	P38355	427 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	SOH1	P38633	127 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	HXT6	P39003	570 aa	Known RBP	4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	HXT7	P39004	570 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	CCT2	P39076	527 aa	Known RBP	4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	PHO90	P39535	881 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	SOP4	P39543	234 aa	Predicted RBP	4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	STR2	P47164	639 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	NUP49	Q02199	472 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	UTP6	Q02354	440 aa	Known RBP	4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	MSC1	Q03104	513 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	CSM3	Q04659	317 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	VPS38	Q05919	439 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	ATG31	Q12421	196 aa		4.59	□□□□□ -1.67
YDR261C-D	YDR261C-D	TRP3	P00937	484 aa		4.59	□□□□□ -1.68
YDR261C-D	YDR261C-D	CMP2	P14747	604 aa		4.59	□□□□□ -1.68
YDR261C-D	YDR261C-D	GEX1	P25596	615 aa		4.59	□□□□□ -1.68
YDR261C-D	YDR261C-D	ECM32	P32644	1121 aa	Known RBP	4.59	□□□□□ -1.68
YDR261C-D	YDR261C-D	VPS35	P34110	944 aa		4.59	□□□□□ -1.68
YDR261C-D	YDR261C-D	SIF2	P38262	535 aa		4.59	□□□□□ -1.68
YDR261C-D	YDR261C-D	PEX32	P38292	413 aa		4.59	□□□□□ -1.68
YDR261C-D	YDR261C-D	YBR225W	P38321	900 aa		4.59	□□□□□ -1.68
YDR261C-D	YDR261C-D	YJR061W	P40355	935 aa		4.59	□□□□□ -1.68
YDR261C-D	YDR261C-D	RPS7B	P48164	190 aa	Known RBP	4.59	□□□□□ -1.68
YDR261C-D	YDR261C-D	ATC1	Q04005	294 aa		4.59	□□□□□ -1.68
YDR261C-D	YDR261C-D	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.59	□□□□□ -1.68
YDR261C-D	YDR261C-D	PDC5	P16467	563 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
YDR261C-D	YDR261C-D	ARG8	P18544	423 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	PET309	P32522	965 aa	Predicted RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	SER1	P33330	395 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	ALG3	P38179	458 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	BCD1	P38772	366 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	MGS1	P40151	587 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	MSS2	P40990	351 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	RPA43	P46669	326 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	APL6	P46682	809 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	YJR098C	P47139	656 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	CTH1	P47976	325 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	JAC1	P53193	184 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	UTP8	P53276	713 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	SLM2	P53955	656 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	RPM2	Q02773	1202 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	SCS7	Q03529	384 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	AFT2	Q08957	416 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	AKR2	Q12013	749 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	TSR3	Q12094	313 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	RPS3	P05750	240 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	PUT3	P25502	979 aa	Predicted RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	PMT2	P31382	759 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	BCH2	P36122	765 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	TFA2	P36145	328 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	TAE1	P38340	232 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	BZZ1	P38822	633 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	VMA7	P39111	118 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	OAF1	P39720	1047 aa	Predicted RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	FAR7	P43592	221 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	PYK2	P52489	506 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	RBG2	P53295	368 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	MAL13	P53338	473 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	MUB1	Q03162	620 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	SDH7	Q04401	133 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	YDL114W	Q07530	308 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	TRM13	Q12383	476 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	SEC23	P15303	768 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	ATP12	P22135	325 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	STE11	P23561	717 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	PRX1	P34227	261 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	MPE1	P35728	441 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	ABZ1	P37254	787 aa	Predicted RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	FAT1	P38225	669 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	GIP1	P38229	639 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	ASG1	P40467	964 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	HPM1	P40481	377 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	ARI1	P53111	347 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	PCL10	P53124	433 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	YGR067C	P53243	804 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	ADE16	P54113	591 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	PNG1	Q02890	363 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	YDR132C	Q03900	495 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	YFH1	Q07540	174 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	MET6	P05694	767 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	RPL4A	P10664	362 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	TPS3	P38426	1054 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	OPT1	P40897	799 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	RPL4B	P49626	362 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	ARE2	P53629	642 aa	Known RBP	4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	ARL3	Q02804	198 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	SML1	Q04964	104 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	HUA2	Q12134	243 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	MDY2	Q12285	212 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	NSI1	Q12457	570 aa		4.58	□□□□□ -1.68
YDR261C-D	YDR261C-D	PDA1	P16387	420 aa	Known RBP	4.57	□□□□□ -1.68
YDR261C-D	YDR261C-D	MRP49	P32388	137 aa		4.57	□□□□□ -1.68
YDR261C-D	YDR261C-D	PET127	P32606	800 aa		4.57	□□□□□ -1.68
YDR261C-D	YDR261C-D	YHI9	P38765	294 aa		4.57	□□□□□ -1.68
YDR261C-D	YDR261C-D	YAP1801	P38856	637 aa		4.57	□□□□□ -1.68
YDR261C-D	YDR261C-D	UBP9	P39967	754 aa		4.57	□□□□□ -1.68
YDR261C-D	YDR261C-D	YER034W	P40022	185 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms