RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	RPT1	P33299	467 aa	Known RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	SQT1	P35184	431 aa		4.86	□□□□□ -1.63
SUP35	YDR172W	NOP4	P37838	685 aa	Known RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	APN2	P38207	520 aa		4.86	□□□□□ -1.63
SUP35	YDR172W	YHR054C	P38780	354 aa		4.86	□□□□□ -1.63
SUP35	YDR172W	SPC97	P38863	823 aa		4.86	□□□□□ -1.63
SUP35	YDR172W	AFG3	P39925	761 aa		4.86	□□□□□ -1.63
SUP35	YDR172W	INP51	P40559	946 aa	Known RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	VPS62	P53285	467 aa		4.86	□□□□□ -1.63
SUP35	YDR172W	YNL134C	P53912	376 aa	Known RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	SUB1	P54000	292 aa	Known RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	MUK1	Q02866	612 aa		4.86	□□□□□ -1.63
SUP35	YDR172W	INA17	Q02888	182 aa		4.86	□□□□□ -1.63
SUP35	YDR172W	MZM1	Q03429	123 aa	Predicted RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	ADE13	Q05911	482 aa	Known RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	TDA5	Q06417	326 aa	Known RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	CMS1	Q07897	291 aa	Known RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	FAP7	Q12055	197 aa	Predicted RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	MDM20	Q12387	796 aa	Known RBP	4.86	□□□□□ -1.63
SUP35	YDR172W	PCD1	Q12524	340 aa		4.86	□□□□□ -1.63
SUP35	YDR172W	TEF1	P02994	458 aa	Known RBP	4.85	□□□□□ -1.63
SUP35	YDR172W	PUT4	P15380	627 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	MRPL25	P23369	157 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	NAR1	P23503	491 aa	Known RBP	4.85	□□□□□ -1.63
SUP35	YDR172W	BUD2	P33314	1104 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	SRB2	P34162	210 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	MDJ1	P35191	511 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	DRE2	P36152	348 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	YMC2	P38087	329 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	RIP-Chip
SUP35	YDR172W	ALD5	P40047	520 aa	Known RBP	4.85	□□□□□ -1.63
SUP35	YDR172W	YJR054W	P47114	497 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	AZR1	P50080	613 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	ALT2	P52892	507 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	TEP1	P53916	434 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	SLG1	P54867	378 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	BET4	Q00618	327 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	ULP1	Q02724	621 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	MUB1	Q03162	620 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	BUD22	Q04347	519 aa	Known RBP	4.85	□□□□□ -1.63
SUP35	YDR172W	KAR4	P25583	335 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	MLS1	P30952	554 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	MET4	P32389	672 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	FRE1	P32791	686 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	TFA2	P36145	328 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	ERP2	P39704	215 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	PFK26	P40433	827 aa	Known RBP	4.85	□□□□□ -1.63
SUP35	YDR172W	TAH11	P47112	604 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	YGR283C	P53336	341 aa	Predicted RBP	4.85	□□□□□ -1.63
SUP35	YDR172W	YPL109C	Q02981	657 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	MDM38	Q08179	573 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	DNL4	Q08387	944 aa	Predicted RBP	4.85	□□□□□ -1.63
SUP35	YDR172W	THI72	Q08579	599 aa		4.85	□□□□□ -1.63
SUP35	YDR172W	ILS1	P09436	1072 aa	Known RBP	4.84	□□□□□ -1.63
SUP35	YDR172W	LRE1	P25579	583 aa	Known RBP	4.84	□□□□□ -1.63
SUP35	YDR172W	URA7	P28274	579 aa	Known RBP	4.84	□□□□□ -1.63
SUP35	YDR172W	SAE2	P46946	345 aa		4.84	□□□□□ -1.63
SUP35	YDR172W	PFD1	P46988	109 aa		4.84	□□□□□ -1.63
SUP35	YDR172W	HLJ1	P48353	224 aa		4.84	□□□□□ -1.63
SUP35	YDR172W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
SUP35	YDR172W	SHE9	Q04172	456 aa		4.84	□□□□□ -1.63
SUP35	YDR172W	YLR177W	Q06251	628 aa		4.84	□□□□□ -1.63
SUP35	YDR172W	YET3	Q07451	203 aa		4.84	□□□□□ -1.63
SUP35	YDR172W	AVL9	Q12500	764 aa		4.84	□□□□□ -1.63
SUP35	YDR172W	VPS5	Q92331	675 aa		4.84	□□□□□ -1.63
SUP35	YDR172W	SSC1	P0CS90	654 aa	Known RBP	4.84	□□□□□ -1.64
SUP35	YDR172W	FUS1	P11710	512 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	MCM5	P29496	775 aa	Known RBP	4.84	□□□□□ -1.64
SUP35	YDR172W	HEL1	P36113	551 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	UIP5	P36137	443 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	ETR1	P38071	380 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	ALG14	P38242	237 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	HSL7	P38274	827 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	STN1	P38960	494 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	DSE1	P40077	573 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	MAF1	P41910	395 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	YFL012W	P43580	148 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	GCV2	P49095	1034 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	BIO5	P53744	561 aa	Known RBP	4.84	□□□□□ -1.64
SUP35	YDR172W	KTR5	P53966	522 aa	Predicted RBP	4.84	□□□□□ -1.64
SUP35	YDR172W	VPS16	Q03308	798 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	RKM2	Q03942	479 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	BSC2	Q05611	235 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	OSW1	Q08692	278 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	YLR053C	Q12026	108 aa		4.84	□□□□□ -1.64
SUP35	YDR172W	FUB1	P25659	250 aa		4.83	□□□□□ -1.64
SUP35	YDR172W	MVD1	P32377	396 aa	Known RBP	4.83	□□□□□ -1.64
SUP35	YDR172W	NIP1	P32497	812 aa	Known RBP	4.83	□□□□□ -1.64
SUP35	YDR172W	AIM26	P32858	118 aa		4.83	□□□□□ -1.64
SUP35	YDR172W	CSE2	P33308	149 aa		4.83	□□□□□ -1.64
SUP35	YDR172W	LIN1	P38852	340 aa	Predicted RBP	4.83	□□□□□ -1.64
SUP35	YDR172W	YAP1801	P38856	637 aa		4.83	□□□□□ -1.64
SUP35	YDR172W	TVP23	P38962	199 aa		4.83	□□□□□ -1.64
SUP35	YDR172W	SCC4	P40090	624 aa		4.83	□□□□□ -1.64
SUP35	YDR172W	SIP5	P40210	489 aa	Known RBP	4.83	□□□□□ -1.64
SUP35	YDR172W	RRT5	P43607	289 aa		4.83	□□□□□ -1.64
SUP35	YDR172W	BIO4	P53630	237 aa		4.83	□□□□□ -1.64
SUP35	YDR172W	RNY1	Q02933	434 aa	Known RBP	4.83	□□□□□ -1.64
SUP35	YDR172W	HOT1	Q03213	719 aa		4.83	□□□□□ -1.64
SUP35	YDR172W	YMR160W	Q03823	816 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms