RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	MTW1	P39731	289 aa		5.31	□□□□□ -1.56
DBF4	YDR052C	HPC2	Q01448	625 aa		5.31	□□□□□ -1.56
DBF4	YDR052C	ACS1	Q01574	713 aa		5.31	□□□□□ -1.56
DBF4	YDR052C	RRP17	Q04031	235 aa	Predicted RBP	5.31	□□□□□ -1.56
DBF4	YDR052C	IRC3	Q06683	689 aa		5.31	□□□□□ -1.56
DBF4	YDR052C	GYP1	Q08484	637 aa		5.31	□□□□□ -1.56
DBF4	YDR052C	AIM41	Q12032	185 aa		5.31	□□□□□ -1.56
DBF4	YDR052C	ATP6	P00854	259 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	GAL1	P04385	528 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	PBS2	P08018	668 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	MRP2	P10663	115 aa	Predicted RBP	5.3	□□□□□ -1.56
DBF4	YDR052C	CYM1	P32898	989 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	AKL1	P38080	1108 aa	Known RBP	5.3	□□□□□ -1.56
DBF4	YDR052C	SEO1	P39709	593 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	YJL070C	P40361	888 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	MAM33	P40513	266 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	CST6	P40535	587 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	NUP85	P46673	744 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	AIP1	P46680	615 aa	Known RBP	5.3	□□□□□ -1.56
DBF4	YDR052C	RPC17	P47076	161 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	CUE3	P53137	624 aa	Known RBP	5.3	□□□□□ -1.56
DBF4	YDR052C	FMP48	P53233	369 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	EGD1	Q02642	157 aa	Known RBP	5.3	□□□□□ -1.56
DBF4	YDR052C	YDR476C	Q03362	224 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	ADE13	Q05911	482 aa	Known RBP	5.3	□□□□□ -1.56
DBF4	YDR052C	CRN1	Q06440	651 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	UBX5	Q06682	500 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	ISA1	Q07821	250 aa	Predicted RBP	5.3	□□□□□ -1.56
DBF4	YDR052C	ALE1	Q08548	619 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	MCD1	Q12158	566 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	ATG34	Q12292	412 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	ATG31	Q12421	196 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	ERG11	P10614	530 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	LAT1	P12695	482 aa	Known RBP	5.3	□□□□□ -1.56
DBF4	YDR052C	MRPL8	P22353	238 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	ICL1	P28240	557 aa	Predicted RBP	5.3	□□□□□ -1.56
DBF4	YDR052C	PMT2	P31382	759 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	TFC1	P32367	649 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	NOP16	P40007	231 aa	Known RBP	5.3	□□□□□ -1.56
DBF4	YDR052C	MXR1	P40029	184 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	EMP65	P40085	556 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	LSM1	P47017	172 aa	Known RBP	5.3	□□□□□ -1.56
DBF4	YDR052C	EMC2	P47133	292 aa	Known RBP	5.3	□□□□□ -1.56
DBF4	YDR052C	MUK1	Q02866	612 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	COQ9	Q05779	260 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	CDA1	Q06702	301 aa		5.3	□□□□□ -1.56
DBF4	YDR052C	SSF2	Q12153	453 aa	Predicted RBP	5.3	□□□□□ -1.56
DBF4	YDR052C	HIS4	P00815	799 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	GRX2	P17695	143 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	PRP5	P21372	849 aa	Predicted RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	VPS34	P22543	875 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	KRE6	P32486	720 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	ANR2	P36090	516 aa	Predicted RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	COS111	P38308	924 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	RIM11	P38615	370 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	IMD2	P38697	523 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	MSR1	P38714	643 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	RTC3	P38804	111 aa	Predicted RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	LNP1	P38878	278 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	STM1	P39015	273 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	LSM8	P47093	109 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	MNT4	P53745	580 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	MRPL13	Q02204	264 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	REC102	Q02721	264 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	SAS4	Q04003	481 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	RAD33	Q04231	177 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	PEX10	Q05568	337 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	CRR1	Q05790	422 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	WHI4	Q07655	649 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	YAP7	Q08182	245 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	YOL075C	Q08234	1294 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	ILV2	P07342	687 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	GLK1	P17709	500 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	SEC18	P18759	758 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	DIT2	P21595	489 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	DGR2	P32330	852 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	VMA6	P32366	345 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	ANP1	P32629	500 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	MIF2	P35201	549 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	GRX7	P38068	203 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	YPK3	P38070	525 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	KTR4	P38131	464 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	RRP8	P38961	392 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	MNN9	P39107	395 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	GPB2	P39717	880 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	YFL034W	P43564	1073 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	DAM1	P53267	343 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	CWC21	Q03375	135 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	FMN1	Q03778	218 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	DUS3	Q06053	668 aa	Known RBP	5.29	□□□□□ -1.56
DBF4	YDR052C	MHR1	Q06630	226 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	LOT6	Q07923	191 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	TSC13	Q99190	310 aa		5.29	□□□□□ -1.56
DBF4	YDR052C	ADE5,7	P07244	802 aa	Known RBP	5.28	□□□□□ -1.56
DBF4	YDR052C	PUT2	P07275	575 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	ATP12	P22135	325 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	YSP3	P25036	478 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	RRT12	P25381	491 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	ATG22	P25568	528 aa		5.28	□□□□□ -1.56
DBF4	YDR052C	CCR4	P31384	837 aa	Known RBP	5.28	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms