RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W PET122P10355 254 aa6.41□□□□□ -1.38
TRP1YDR007W AAC3P18238 307 aa6.41□□□□□ -1.38
TRP1YDR007W SWC3P31376 625 aa6.41□□□□□ -1.38
TRP1YDR007W CBF2P32504 956 aa6.41□□□□□ -1.38
TRP1YDR007W PHO11P35842 467 aa6.41□□□□□ -1.38
TRP1YDR007W CTP1P38152 299 aa6.41□□□□□ -1.38
TRP1YDR007W PHO12P38693 467 aa6.41□□□□□ -1.38
TRP1YDR007W FMP52P40008 231 aa6.41□□□□□ -1.38
TRP1YDR007W RIC1P40395 1056 aa6.41□□□□□ -1.38
TRP1YDR007W HOF1Q05080 669 aa6.41□□□□□ -1.38
TRP1YDR007W SUL2Q12325 893 aa6.41□□□□□ -1.38
TRP1YDR007W TRM13Q12383 476 aa6.41□□□□□ -1.38
TRP1YDR007W SIR3P06701 978 aa6.4□□□□□ -1.38
TRP1YDR007W EFT1P32324 842 aaKnown RBP6.4□□□□□ -1.38
TRP1YDR007W GCD7P32502 381 aaPredicted RBP6.4□□□□□ -1.38
TRP1YDR007W MPT5P39016 859 aaKnown RBP RIP-Chip data6.4□□□□□ -1.38not detected
TRP1YDR007W UPF3P48412 387 aaKnown RBP6.4□□□□□ -1.38
TRP1YDR007W AIM39Q08223 395 aa6.4□□□□□ -1.38
TRP1YDR007W PCD1Q12524 340 aa6.4□□□□□ -1.38
TRP1YDR007W EDE1P34216 1381 aa6.4□□□□□ -1.39
TRP1YDR007W PAN1P32521 1480 aa6.4□□□□□ -1.39
TRP1YDR007W YOR1P53049 1477 aa6.4□□□□□ -1.39
TRP1YDR007W RKR1Q04781 1562 aa6.4□□□□□ -1.39
TRP1YDR007W MLP2P40457 1679 aa6.39□□□□□ -1.39
TRP1YDR007W PMA1P05030 918 aaKnown RBP6.39□□□□□ -1.39
TRP1YDR007W CDC16P09798 840 aa6.39□□□□□ -1.39
TRP1YDR007W ABF1P14164 731 aa6.39□□□□□ -1.39
TRP1YDR007W VPS34P22543 875 aa6.39□□□□□ -1.39
TRP1YDR007W FUB1P25659 250 aa6.39□□□□□ -1.39
TRP1YDR007W CAP1P28495 268 aaKnown RBP6.39□□□□□ -1.39
TRP1YDR007W NUP120P35729 1037 aa6.39□□□□□ -1.39
TRP1YDR007W COG1P53079 417 aa6.39□□□□□ -1.39
TRP1YDR007W CLU1Q03690 1277 aaKnown RBP6.39□□□□□ -1.39
TRP1YDR007W IMH1Q06704 911 aaKnown RBP6.39□□□□□ -1.39
TRP1YDR007W MLH3Q12083 715 aa6.39□□□□□ -1.39
TRP1YDR007W ARB1P40024 610 aaKnown RBP6.38□□□□□ -1.39
TRP1YDR007W SKP2P42843 763 aa6.38□□□□□ -1.39
TRP1YDR007W ZAP1P47043 880 aa6.38□□□□□ -1.39
TRP1YDR007W FHN1P53279 174 aa6.38□□□□□ -1.39
TRP1YDR007W YAP1802P53309 568 aa6.38□□□□□ -1.39
TRP1YDR007W RNT1Q02555 471 aa6.38□□□□□ -1.39
TRP1YDR007W EFR3Q03653 782 aaKnown RBP6.38□□□□□ -1.39
TRP1YDR007W GSF2Q04697 403 aaKnown RBP6.38□□□□□ -1.39
TRP1YDR007W YDL086WQ07505 273 aa6.38□□□□□ -1.39
TRP1YDR007W YLR302CO13544 120 aa6.37□□□□□ -1.39
TRP1YDR007W SEM1O94742 89 aa6.37□□□□□ -1.39
TRP1YDR007W ALG7P07286 448 aa6.37□□□□□ -1.39
TRP1YDR007W MRP7P12687 371 aa6.37□□□□□ -1.39
TRP1YDR007W ELF1P36053 145 aa6.37□□□□□ -1.39
TRP1YDR007W MRPL7P36519 292 aa6.37□□□□□ -1.39
TRP1YDR007W IST3P40565 148 aaPredicted RBP6.37□□□□□ -1.39
TRP1YDR007W YSH1Q06224 779 aaPredicted RBP6.37□□□□□ -1.39
TRP1YDR007W SDH5Q08230 162 aa6.37□□□□□ -1.39
TRP1YDR007W NBP2Q12163 236 aa6.37□□□□□ -1.39
TRP1YDR007W SKM1Q12469 655 aa6.37□□□□□ -1.39
TRP1YDR007W YCF1P39109 1515 aaKnown RBP6.36□□□□□ -1.39
TRP1YDR007W THR1P17423 357 aaKnown RBP6.36□□□□□ -1.39
TRP1YDR007W YJR061WP40355 935 aa6.36□□□□□ -1.39
TRP1YDR007W LYS14P40971 790 aa6.36□□□□□ -1.39
TRP1YDR007W PHO23P50947 330 aa6.36□□□□□ -1.39
TRP1YDR007W BSC5P53755 489 aa6.36□□□□□ -1.39
TRP1YDR007W VAM6Q07468 1049 aa6.36□□□□□ -1.39
TRP1YDR007W USV1Q12132 391 aa6.36□□□□□ -1.39
TRP1YDR007W MHP1P43638 1398 aa6.35□□□□□ -1.39
TRP1YDR007W FOB1O13329 566 aa6.35□□□□□ -1.39
TRP1YDR007W ATP2P00830 511 aaKnown RBP6.35□□□□□ -1.39
TRP1YDR007W CMK1P27466 446 aaKnown RBP6.35□□□□□ -1.39
TRP1YDR007W HRR25P29295 494 aaKnown RBP6.35□□□□□ -1.39
TRP1YDR007W THI80P35202 319 aa6.35□□□□□ -1.39
TRP1YDR007W YHR097CP38809 366 aaKnown RBP6.35□□□□□ -1.39
TRP1YDR007W VPS4P52917 437 aa6.35□□□□□ -1.39
TRP1YDR007W YGR151CP53287 111 aa6.35□□□□□ -1.39
TRP1YDR007W RBG2P53295 368 aaKnown RBP6.35□□□□□ -1.39
TRP1YDR007W MFM1Q02783 413 aa6.35□□□□□ -1.39
TRP1YDR007W SPC19Q03954 165 aa6.35□□□□□ -1.39
TRP1YDR007W CRF1Q04930 467 aa6.35□□□□□ -1.39
TRP1YDR007W TY2A-LR1P0C2J4 438 aa6.34□□□□□ -1.39
TRP1YDR007W TY2A-FP0CX61 438 aa6.34□□□□□ -1.39
TRP1YDR007W TY2A-GR2P0CX62 438 aa6.34□□□□□ -1.39
TRP1YDR007W HCM1P25364 564 aa6.34□□□□□ -1.39
TRP1YDR007W RNQ1P25367 405 aa6.34□□□□□ -1.39
TRP1YDR007W TY2A-CP25383 438 aa6.34□□□□□ -1.39
TRP1YDR007W YCR061WP25639 631 aa6.34□□□□□ -1.39
TRP1YDR007W APL3P38065 1025 aa6.34□□□□□ -1.39
TRP1YDR007W THI6P41835 540 aa6.34□□□□□ -1.39
TRP1YDR007W DIP5P53388 608 aa6.34□□□□□ -1.39
TRP1YDR007W CSL4P53859 292 aaPredicted RBP6.34□□□□□ -1.39
TRP1YDR007W TY2A-DR2Q03483 438 aa6.34□□□□□ -1.39
TRP1YDR007W TY2A-BQ12260 438 aa6.34□□□□□ -1.39
TRP1YDR007W TY2A-OR2Q12293 438 aa6.34□□□□□ -1.39
TRP1YDR007W TY2A-DR1Q12392 438 aa6.34□□□□□ -1.39
TRP1YDR007W TY2A-OR1Q12439 438 aa6.34□□□□□ -1.39
TRP1YDR007W ERP4Q12450 207 aa6.34□□□□□ -1.39
TRP1YDR007W TY2A-DR3Q99303 438 aa6.34□□□□□ -1.39
TRP1YDR007W PPR1P07272 904 aaPredicted RBP6.33□□□□□ -1.4
TRP1YDR007W CBF5P33322 483 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
TRP1YDR007W UBS1P38290 277 aa6.33□□□□□ -1.4
TRP1YDR007W SUL1P38359 859 aa6.33□□□□□ -1.4
TRP1YDR007W TAM41P53230 385 aa6.33□□□□□ -1.4
TRP1YDR007W NNF2P53253 936 aa6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms